RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 TRPT1Q86TN4 253 aaKnown RBP4.99□□□□□ -1.61
UBBP1-201ENST00000392399 LYPD1Q8N2G4 141 aa4.99□□□□□ -1.61
UBBP1-201ENST00000392399 FAM167A-AS1Q96KT0 104 aa4.99□□□□□ -1.61
UBBP1-201ENST00000392399 ASCL2Q99929 193 aa4.99□□□□□ -1.61
UBBP1-201ENST00000392399 SPATA25Q9BR10 227 aa4.99□□□□□ -1.61
UBBP1-201ENST00000392399 PAXXQ9BUH6 204 aa4.99□□□□□ -1.61
UBBP1-201ENST00000392399 SAV1Q9H4B6 383 aaPredicted RBP4.99□□□□□ -1.61
UBBP1-201ENST00000392399 ZNF331Q9NQX6 463 aaPredicted RBP4.99□□□□□ -1.61
UBBP1-201ENST00000392399 PRELID1Q9Y255 219 aa4.99□□□□□ -1.61
UBBP1-201ENST00000392399 TP53TG1Q9Y2A0 90 aa4.99□□□□□ -1.61
UBBP1-201ENST00000392399 HLA-DRB4X5D2U9 266 aa4.99□□□□□ -1.61
UBBP1-201ENST00000392399 STAB2Q8WWQ8 2551 aa4.99□□□□□ -1.61
UBBP1-201ENST00000392399 TRAV8-2A0A0B4J237 113 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 A0A0J9YX75 114 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 ZNF705EA8MWA4 302 aaPredicted RBP4.98□□□□□ -1.61
UBBP1-201ENST00000392399 H3BQ15 152 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 OR7C2O60412 319 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 HBE1P02100 147 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 CDC34P49427 236 aaPredicted RBP4.98□□□□□ -1.61
UBBP1-201ENST00000392399 PMS2P11Q13670 270 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 ZNF124Q15973 351 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 ACTL10Q5JWF8 245 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 FAM74A1Q5RGS3 127 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 AKR1C8PQ5T2L2 129 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 COMMD7Q86VX2 200 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 RPP25LQ8N5L8 163 aaKnown RBP4.98□□□□□ -1.61
UBBP1-201ENST00000392399 MRPL53Q96EL3 112 aaKnown RBP4.98□□□□□ -1.61
UBBP1-201ENST00000392399 SLC25A2Q9BXI2 301 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 C1QTNF4Q9BXJ3 329 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 ACTR3CQ9C0K3 210 aaPredicted RBP4.98□□□□□ -1.61
UBBP1-201ENST00000392399 SMDT1Q9H4I9 107 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 AAMDCQ9H7C9 122 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 ZNF586Q9NXT0 402 aa4.98□□□□□ -1.61
UBBP1-201ENST00000392399 KNCNA6PVL3 124 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 A8MTW9 85 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 FAM229AH3BQW9 127 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 TEX46H3BTG2 121 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 AMBPP02760 352 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 STAG3L2P0CL84 134 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 STAG3L3P0CL85 134 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 PYYP10082 97 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 RPL35AP18077 110 aaKnown RBP4.97□□□□□ -1.61
UBBP1-201ENST00000392399 RAB2AP61019 212 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 FAM122CQ6P4D5 195 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 ARL6IP6Q8N6S5 226 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 ZNF738Q8NE65 137 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 RAB24Q969Q5 203 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 RPUSD4Q96CM3 377 aaKnown RBP4.97□□□□□ -1.61
UBBP1-201ENST00000392399 RNF183Q96D59 192 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 FXYD5Q96DB9 178 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 SH3BGRL3Q9H299 93 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 RFNGQ9Y644 331 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 U3KQK5 164 aa4.97□□□□□ -1.61
UBBP1-201ENST00000392399 CTXND1A0A1B0GTU2 59 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 KRBOX1C9JBD0 128 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 SLC17A3O00476 420 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 SPRY2O43597 315 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 NDUFB4O95168 129 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 CXorf1O96002 111 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 CA1P00915 261 aaPredicted RBP4.96□□□□□ -1.62
UBBP1-201ENST00000392399 TAGLN2P37802 199 aaKnown RBP4.96□□□□□ -1.62
UBBP1-201ENST00000392399 UBE2L3P68036 154 aaKnown RBP4.96□□□□□ -1.62
UBBP1-201ENST00000392399 GDF5OSQ5U4N7 250 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 IGFL4Q6B9Z1 124 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 SLC7A5P1Q8MH63 180 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 RNF182Q8N6D2 247 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 OR4B1Q8NGF8 309 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 OR8A1Q8NGG7 326 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 OR10J6PQ8NGY7 276 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 SUN5Q8TC36 379 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 BLNKQ8WV28 456 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 MBD3L1Q8WWY6 194 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 ZNF503Q96F45 646 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 C20orf173Q96LM9 149 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 FAM210AQ96ND0 272 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 RCHY1Q96PM5 261 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 OVOL2Q9BRP0 275 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 TMEM167BQ9NRX6 74 aa4.96□□□□□ -1.62
UBBP1-201ENST00000392399 AGRNO00468 2067 aa4.95□□□□□ -1.62
UBBP1-201ENST00000392399 TENM3Q9P273 2699 aa4.95□□□□□ -1.62
UBBP1-201ENST00000392399 F6UB75 175 aa4.95□□□□□ -1.62
UBBP1-201ENST00000392399 H3BTX0 84 aa4.95□□□□□ -1.62
UBBP1-201ENST00000392399 SNRPCP09234 159 aaKnown RBP4.95□□□□□ -1.62
UBBP1-201ENST00000392399 OR10J4P0C629 311 aa4.95□□□□□ -1.62
UBBP1-201ENST00000392399 HLA-DMBP28068 263 aa4.95□□□□□ -1.62
UBBP1-201ENST00000392399 CSN1S1P47710 185 aa4.95□□□□□ -1.62
UBBP1-201ENST00000392399 CNN1P51911 297 aaKnown RBP4.95□□□□□ -1.62
UBBP1-201ENST00000392399 RANP62826 216 aaKnown RBP4.95□□□□□ -1.62
UBBP1-201ENST00000392399 ICAM4Q14773 271 aa4.95□□□□□ -1.62
UBBP1-201ENST00000392399 FAM213BQ8TBF2 198 aa4.95□□□□□ -1.62
UBBP1-201ENST00000392399 RXFP4Q8TDU9 374 aa4.95□□□□□ -1.62
UBBP1-201ENST00000392399 LINC00477Q96M19 166 aa4.95□□□□□ -1.62
UBBP1-201ENST00000392399 PPP1R14DQ9NXH3 145 aa4.95□□□□□ -1.62
UBBP1-201ENST00000392399 RBAKDNA6NC62 111 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 ZNF705FA8MVS1 300 aaPredicted RBP4.94□□□□□ -1.62
UBBP1-201ENST00000392399 HMGB3O15347 200 aaKnown RBP4.94□□□□□ -1.62
UBBP1-201ENST00000392399 IGKV3-20P01619 116 aa4.94□□□□□ -1.62
UBBP1-201ENST00000392399 SLC25A5P05141 298 aaKnown RBP4.94□□□□□ -1.62
UBBP1-201ENST00000392399 GIG44P09565 113 aaPredicted RBP4.94□□□□□ -1.62
UBBP1-201ENST00000392399 H2AFB1P0C5Y9 115 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms