RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ZNF503Q96F45 646 aa10.51□□□□□ -0.73
TRAPPC9-201ENST00000389328 SMPXQ9UHP9 88 aa10.51□□□□□ -0.73
TRAPPC9-201ENST00000389328 FAM208BQ5VWN6 2430 aa10.51□□□□□ -0.73
TRAPPC9-201ENST00000389328 TNFRSF6BO95407 300 aa10.51□□□□□ -0.73
TRAPPC9-201ENST00000389328 COX6CP09669 75 aa10.51□□□□□ -0.73
TRAPPC9-201ENST00000389328 KLRD1Q13241 179 aa10.51□□□□□ -0.73
TRAPPC9-201ENST00000389328 ANKRD39Q53RE8 183 aa10.51□□□□□ -0.73
TRAPPC9-201ENST00000389328 TSSC4Q9Y5U2 329 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-201ENST00000389328 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 TMEM8BA6NDV4 472 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 NPYP01303 97 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 LTAP01374 205 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 ERCC8Q13216 396 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 FAM159AQ6UWV7 190 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 ZGRF1Q86YA3 2104 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 GTSF1Q8WW33 167 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 ZNF256Q9Y2P7 627 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 A0A1W2PPM0 123 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 BUB1B-PAK6H3BSN5 160 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 UTF1Q5T230 341 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 LYPD1Q8N2G4 141 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 TNFRSF14Q92956 283 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 IGLV1-44P01699 117 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 LTBP2Q14767 1821 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 MBD3L4A6NDZ8 208 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 MBD3L3A6NE82 208 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 MBD3L5A6NJ08 208 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 C2orf70A6NJV1 201 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 RNASE4P34096 147 aaKnown RBP10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 CKS1BP61024 79 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 LY6EQ16553 131 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 LGALS9BQ3B8N2 356 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 LGALS9CQ6DKI2 356 aa10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 MBD3L2Q8NHZ7 208 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC9-201ENST00000389328 TRAV8-2A0A0B4J237 113 aa10.49□□□□□ -0.73
TRAPPC9-201ENST00000389328 PTPRQQ9UMZ3 2332 aa10.49□□□□□ -0.73
TRAPPC9-201ENST00000389328 SNCGO76070 127 aa10.49□□□□□ -0.73
TRAPPC9-201ENST00000389328 TRGV3P03979 118 aa10.49□□□□□ -0.73
TRAPPC9-201ENST00000389328 TMEM75Q8N9X5 138 aa10.49□□□□□ -0.73
TRAPPC9-201ENST00000389328 THAP8Q8NA92 274 aa10.49□□□□□ -0.73
TRAPPC9-201ENST00000389328 ABHD17AQ96GS6 310 aa10.49□□□□□ -0.73
TRAPPC9-201ENST00000389328 MUC22E2RYF6 1773 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC9-201ENST00000389328 GDF5OSQ5U4N7 250 aa10.49□□□□□ -0.73
TRAPPC9-201ENST00000389328 AMTNQ6UX39 209 aa10.49□□□□□ -0.73
TRAPPC9-201ENST00000389328 PGPEP1Q9NXJ5 209 aa10.49□□□□□ -0.73
TRAPPC9-201ENST00000389328 NUP210LQ5VU65 1888 aa10.49□□□□□ -0.73
TRAPPC9-201ENST00000389328 ACACBO00763 2458 aa10.49□□□□□ -0.73
TRAPPC9-201ENST00000389328 ID1P41134 155 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 GATA4P43694 442 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 LINC00527Q9UJ94 153 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 E7EUB6 86 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 IGLV2-8P01709 118 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 SLC50A1Q9BRV3 221 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 SCRT2Q9NQ03 307 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 MRPL36Q9P0J6 103 aaKnown RBP10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 LY6HO94772 140 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 IGLC1P0CG04 106 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 CTRLP40313 264 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 EMP1P54849 157 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 C15orf32Q32M92 178 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 IGHV3-11P01762 117 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 ORMDL2Q53FV1 153 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 NCOR1P1Q9H4R4 102 aa10.48□□□□□ -0.73
TRAPPC9-201ENST00000389328 PRSS46E5RG02 174 aa10.47□□□□□ -0.73
TRAPPC9-201ENST00000389328 WFDC12Q8WWY7 111 aa10.47□□□□□ -0.73
TRAPPC9-201ENST00000389328 CSTL1Q9H114 145 aa10.47□□□□□ -0.73
TRAPPC9-201ENST00000389328 C22orf46C9J442 243 aa10.47□□□□□ -0.73
TRAPPC9-201ENST00000389328 TMEM238C9JI98 176 aa10.47□□□□□ -0.73
TRAPPC9-201ENST00000389328 H3BMG7 143 aa10.47□□□□□ -0.73
TRAPPC9-201ENST00000389328 NDUFS7O75251 213 aa10.47□□□□□ -0.73
TRAPPC9-201ENST00000389328 LINC00310P59036 64 aa10.47□□□□□ -0.73
TRAPPC9-201ENST00000389328 IGHV3-64A0A075B6Q5 118 aa10.46□□□□□ -0.73
TRAPPC9-201ENST00000389328 NDUFS8O00217 210 aa10.46□□□□□ -0.73
TRAPPC9-201ENST00000389328 C5orf64Q2M2E5 130 aa10.46□□□□□ -0.73
TRAPPC9-201ENST00000389328 TTTY13Q9BZ97 58 aa10.46□□□□□ -0.73
TRAPPC9-201ENST00000389328 NDPQ00604 133 aa10.46□□□□□ -0.74
TRAPPC9-201ENST00000389328 TMEM155Q4W5P6 130 aa10.46□□□□□ -0.74
TRAPPC9-201ENST00000389328 LINC01545Q5VT33 79 aa10.46□□□□□ -0.74
TRAPPC9-201ENST00000389328 RNF182Q8N6D2 247 aa10.46□□□□□ -0.74
TRAPPC9-201ENST00000389328 A8MWV9 139 aa10.46□□□□□ -0.74
TRAPPC9-201ENST00000389328 K7EMI3 77 aa10.46□□□□□ -0.74
TRAPPC9-201ENST00000389328 SYT8Q8NBV8 401 aa10.46□□□□□ -0.74
TRAPPC9-201ENST00000389328 ANAPC13Q9BS18 74 aa10.46□□□□□ -0.74
TRAPPC9-201ENST00000389328 C5orf42Q9H799 3197 aa10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 WISP2O76076 250 aa10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 LOXP28300 417 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 PRR25Q96S07 402 aa10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 MRPL35Q9NZE8 188 aaKnown RBP10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 C14orf178Q8N769 122 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 TRAV2A0A0B4J234 112 aa10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 TRAV26-2A0A0B4J265 109 aa10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 AZU1P20160 251 aa10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 PLNP26678 52 aa10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 RBX1P62877 108 aa10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 ZNF562Q6V9R5 426 aa10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 IGLV3-9A0A075B6K5 115 aa10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 TEX48A0A1B0GUV7 120 aa10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 NPIPB6E9PJ23 425 aa10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 H7C1H1 209 aa10.45□□□□□ -0.74
TRAPPC9-201ENST00000389328 IGHV4-39P01824 125 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms