RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 SRSF4Q08170 494 aaKnown RBP12□□□□□ -0.49
SNPH-202ENST00000381873 RNF138Q8WVD3 245 aa12□□□□□ -0.49
SNPH-202ENST00000381873 YPEL3P61236 119 aaPredicted RBP12□□□□□ -0.49
SNPH-202ENST00000381873 LSM4Q9Y4Z0 139 aaKnown RBP12□□□□□ -0.49
SNPH-202ENST00000381873 OTOGLQ3ZCN5 2332 aa12□□□□□ -0.49
SNPH-202ENST00000381873 TMEM238C9JI98 176 aa12□□□□□ -0.49
SNPH-202ENST00000381873 CFHR2P36980 270 aa12□□□□□ -0.49
SNPH-202ENST00000381873 TCF15Q12870 199 aa12□□□□□ -0.49
SNPH-202ENST00000381873 PLEKHB2Q96CS7 222 aa12□□□□□ -0.49
SNPH-202ENST00000381873 FAM215AQ9Y5M1 114 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 GGTLC3B5MD39 225 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 C6orf226Q5I0X4 101 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 ORAOV1Q8WV07 137 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 LIME1Q9H400 295 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 TNCP24821 2201 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 G3V318 75 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 PAX4O43316 350 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 IGFL2Q6UWQ7 119 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 CSTL1Q9H114 145 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 MS4A6AQ9H2W1 248 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 CST9LQ9H4G1 147 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 ANKHD1Q8IWZ3 2542 aaKnown RBP11.99□□□□□ -0.49
SNPH-202ENST00000381873 ARMS2P0C7Q2 107 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 TMEM95Q3KNT9 176 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 DEFB104AQ8WTQ1 72 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 TMEM14BQ9NUH8 114 aa11.99□□□□□ -0.49
SNPH-202ENST00000381873 IGLV3-9A0A075B6K5 115 aa11.98□□□□□ -0.49
SNPH-202ENST00000381873 IGLV1-44P01699 117 aa11.98□□□□□ -0.49
SNPH-202ENST00000381873 RASL10AQ92737 203 aa11.98□□□□□ -0.49
SNPH-202ENST00000381873 REG4Q9BYZ8 158 aa11.98□□□□□ -0.49
SNPH-202ENST00000381873 IGHV4-39P01824 125 aa11.98□□□□□ -0.49
SNPH-202ENST00000381873 NDUFA4L2Q9NRX3 87 aa11.98□□□□□ -0.49
SNPH-202ENST00000381873 PSCAO43653 123 aa11.98□□□□□ -0.49
SNPH-202ENST00000381873 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
SNPH-202ENST00000381873 HEATR5AQ86XA9 2040 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 TRAV8-2A0A0B4J237 113 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 AMBPP02760 352 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 ERG28Q9UKR5 140 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 Q86TA4 180 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 A0A087WWL8 130 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 J3QLI3 93 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 HSD52Q0P140 79 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 ERCC8Q13216 396 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 LINC00311Q8N616 119 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 XCL2Q9UBD3 114 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 M0R2P5 195 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 LYL1P12980 280 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 PRR31Q5SQ13 230 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 LINC00479Q96M42 142 aa11.97□□□□□ -0.49
SNPH-202ENST00000381873 HIST3H2BBQ8N257 126 aa11.96□□□□□ -0.49
SNPH-202ENST00000381873 OR2K2Q8NGT1 345 aa11.96□□□□□ -0.49
SNPH-202ENST00000381873 C1orf147Q96MC9 270 aaPredicted RBP11.96□□□□□ -0.49
SNPH-202ENST00000381873 LINC01619G3V211 115 aa11.96□□□□□ -0.49
SNPH-202ENST00000381873 WISP1O95388 367 aa11.96□□□□□ -0.49
SNPH-202ENST00000381873 ZNF479Q96JC4 524 aa11.96□□□□□ -0.49
SNPH-202ENST00000381873 C11orf68Q9H3H3 251 aaKnown RBP11.96□□□□□ -0.49
SNPH-202ENST00000381873 TEX36Q5VZQ5 186 aa11.96□□□□□ -0.5
SNPH-202ENST00000381873 AMN1Q8IY45 258 aa11.96□□□□□ -0.5
SNPH-202ENST00000381873 HIVEP2P31629 2446 aa11.96□□□□□ -0.5
SNPH-202ENST00000381873 TRAV13-1A0A0B4J241 112 aa11.96□□□□□ -0.5
SNPH-202ENST00000381873 RHODO00212 210 aa11.96□□□□□ -0.5
SNPH-202ENST00000381873 ZNF833PQ6ZTB9 187 aa11.96□□□□□ -0.5
SNPH-202ENST00000381873 WDR86Q86TI4 376 aa11.95□□□□□ -0.5
SNPH-202ENST00000381873 MED13Q9UHV7 2174 aa11.95□□□□□ -0.5
SNPH-202ENST00000381873 C17orf58Q2M2W7 97 aa11.95□□□□□ -0.5
SNPH-202ENST00000381873 DUX4L9Q6RFH8 374 aaPredicted RBP11.95□□□□□ -0.5
SNPH-202ENST00000381873 PHLDA1Q8WV24 401 aaPredicted RBP11.95□□□□□ -0.5
SNPH-202ENST00000381873 DOCK11Q5JSL3 2073 aa11.95□□□□□ -0.5
SNPH-202ENST00000381873 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.95□□□□□ -0.5
SNPH-202ENST00000381873 C1orf194Q5T5A4 169 aa11.95□□□□□ -0.5
SNPH-202ENST00000381873 DMRTC2Q8IXT2 367 aaPredicted RBP11.95□□□□□ -0.5
SNPH-202ENST00000381873 TMEM158Q8WZ71 300 aa11.95□□□□□ -0.5
SNPH-202ENST00000381873 ZNF503-AS2A6NEH8 195 aa11.94□□□□□ -0.5
SNPH-202ENST00000381873 IL17RELQ6ZVW7 336 aa11.94□□□□□ -0.5
SNPH-202ENST00000381873 FNDC4Q9H6D8 234 aaPredicted RBP11.94□□□□□ -0.5
SNPH-202ENST00000381873 FAM90A2PQ658T7 463 aa11.94□□□□□ -0.5
SNPH-202ENST00000381873 SPOCK3Q9BQ16 436 aa11.94□□□□□ -0.5
SNPH-202ENST00000381873 C2orf16Q68DN1 1984 aa11.94□□□□□ -0.5
SNPH-202ENST00000381873 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
SNPH-202ENST00000381873 LY6G5BQ8NDX9 201 aa11.94□□□□□ -0.5
SNPH-202ENST00000381873 DKK1O94907 266 aa11.93□□□□□ -0.5
SNPH-202ENST00000381873 TMEM256Q8N2U0 113 aa11.93□□□□□ -0.5
SNPH-202ENST00000381873 PLXND1Q9Y4D7 1925 aa11.93□□□□□ -0.5
SNPH-202ENST00000381873 ATXN8Q156A1 80 aa11.93□□□□□ -0.5
SNPH-202ENST00000381873 RSPO1Q2MKA7 263 aaPredicted RBP11.93□□□□□ -0.5
SNPH-202ENST00000381873 TCTEX1D4Q5JR98 221 aa11.93□□□□□ -0.5
SNPH-202ENST00000381873 MST1LQ2TV78 715 aa11.93□□□□□ -0.5
SNPH-202ENST00000381873 ZNF524Q96C55 264 aa11.93□□□□□ -0.5
SNPH-202ENST00000381873 ZC2HC1BQ5TFG8 222 aa11.92□□□□□ -0.5
SNPH-202ENST00000381873 MRPL27Q9P0M9 148 aaKnown RBP11.92□□□□□ -0.5
SNPH-202ENST00000381873 KNCNA6PVL3 124 aa11.92□□□□□ -0.5
SNPH-202ENST00000381873 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.92□□□□□ -0.5
SNPH-202ENST00000381873 SS18Q15532 418 aa11.92□□□□□ -0.5
SNPH-202ENST00000381873 KAAG1Q9UBP8 84 aa11.92□□□□□ -0.5
SNPH-202ENST00000381873 A0A1B0GV72 72 aa11.92□□□□□ -0.5
SNPH-202ENST00000381873 A8MWV9 139 aa11.92□□□□□ -0.5
SNPH-202ENST00000381873 DOPEY1Q5JWR5 2465 aa11.92□□□□□ -0.5
SNPH-202ENST00000381873 SMKR1H3BMG3 65 aa11.92□□□□□ -0.5
SNPH-202ENST00000381873 GATD1Q8NB37 220 aa11.92□□□□□ -0.5
SNPH-202ENST00000381873 OBSL1O75147 1896 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms