RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 FREM3P0C091 2139 aa11.31□□□□□ -0.6
SNPH-201ENST00000381867 K7EP34 96 aa11.31□□□□□ -0.6
SNPH-201ENST00000381867 LCNL1Q6ZST4 164 aa11.31□□□□□ -0.6
SNPH-201ENST00000381867 Q6ZWC4 215 aa11.31□□□□□ -0.6
SNPH-201ENST00000381867 SHANK2-AS3Q9BTD1 123 aa11.31□□□□□ -0.6
SNPH-201ENST00000381867 SIGLEC9Q9Y336 463 aa11.31□□□□□ -0.6
SNPH-201ENST00000381867 TMEM75Q8N9X5 138 aa11.3□□□□□ -0.6
SNPH-201ENST00000381867 F8W1H4 67 aa11.3□□□□□ -0.6
SNPH-201ENST00000381867 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
SNPH-201ENST00000381867 PRIMA1Q86XR5 153 aa11.3□□□□□ -0.6
SNPH-201ENST00000381867 A0A087WX48 190 aa11.3□□□□□ -0.6
SNPH-201ENST00000381867 SLAQ13239 276 aa11.3□□□□□ -0.6
SNPH-201ENST00000381867 FHL1Q13642 323 aa11.3□□□□□ -0.6
SNPH-201ENST00000381867 BRD3OSQ6XYD6 125 aa11.3□□□□□ -0.6
SNPH-201ENST00000381867 ZNF625Q96I27 306 aaPredicted RBP11.3□□□□□ -0.6
SNPH-201ENST00000381867 GAFA1Q96PS6 74 aa11.3□□□□□ -0.6
SNPH-201ENST00000381867 SPXQ9BT56 116 aa11.3□□□□□ -0.6
SNPH-201ENST00000381867 CACNA1DQ01668 2161 aa11.3□□□□□ -0.6
SNPH-201ENST00000381867 YPEL3P61236 119 aaPredicted RBP11.29□□□□□ -0.6
SNPH-201ENST00000381867 KLRD1Q13241 179 aa11.29□□□□□ -0.6
SNPH-201ENST00000381867 GPR179Q6PRD1 2367 aa11.29□□□□□ -0.6
SNPH-201ENST00000381867 INAFM2P0DMQ5 153 aa11.29□□□□□ -0.6
SNPH-201ENST00000381867 SP5Q6BEB4 398 aaPredicted RBP11.29□□□□□ -0.6
SNPH-201ENST00000381867 C1orf159Q96HA4 380 aa11.29□□□□□ -0.6
SNPH-201ENST00000381867 VGLL1Q99990 258 aa11.29□□□□□ -0.6
SNPH-201ENST00000381867 K7EP13 123 aa11.29□□□□□ -0.6
SNPH-201ENST00000381867 MMP23AO75900 390 aa11.29□□□□□ -0.6
SNPH-201ENST00000381867 NDPQ00604 133 aa11.29□□□□□ -0.6
SNPH-201ENST00000381867 IGFL4Q6B9Z1 124 aa11.29□□□□□ -0.6
SNPH-201ENST00000381867 H3BUX3 64 aa11.29□□□□□ -0.6
SNPH-201ENST00000381867 C6orf226Q5I0X4 101 aa11.29□□□□□ -0.6
SNPH-201ENST00000381867 C3orf56Q8N813 242 aa11.29□□□□□ -0.6
SNPH-201ENST00000381867 C2orf16Q68DN1 1984 aa11.29□□□□□ -0.6
SNPH-201ENST00000381867 PRSS46E5RG02 174 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 TRGV1A0A0A0MS02 117 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 LINC00205P59089 165 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 FAM104BQ5XKR9 115 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 SRSF8Q9BRL6 282 aaKnown RBP11.28□□□□□ -0.6
SNPH-201ENST00000381867 NCOR1P1Q9H4R4 102 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 FCN3O75636 299 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 COX8AP10176 69 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 SPANXDQ9BXN6 97 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 BUB1B-PAK6H3BSN5 160 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 RNF138Q8WVD3 245 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 TMEM213A2RRL7 107 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 CFHR2P36980 270 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 MLANAQ16655 118 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 Q8N8P6 123 aa11.28□□□□□ -0.6
SNPH-201ENST00000381867 IGKV1D-17A0A075B6S4 117 aa11.27□□□□□ -0.6
SNPH-201ENST00000381867 GATA3P23771 443 aa11.27□□□□□ -0.6
SNPH-201ENST00000381867 ANAPC10Q9UM13 185 aa11.27□□□□□ -0.6
SNPH-201ENST00000381867 Q8TCH9 128 aa11.27□□□□□ -0.61
SNPH-201ENST00000381867 MPDZO75970 2070 aa11.27□□□□□ -0.61
SNPH-201ENST00000381867 A0A087WWL8 130 aa11.27□□□□□ -0.61
SNPH-201ENST00000381867 TMEM141Q96I45 108 aa11.27□□□□□ -0.61
SNPH-201ENST00000381867 GATA4P43694 442 aa11.27□□□□□ -0.61
SNPH-201ENST00000381867 TRPT1Q86TN4 253 aaKnown RBP11.27□□□□□ -0.61
SNPH-201ENST00000381867 IGLL1P15814 213 aa11.26□□□□□ -0.61
SNPH-201ENST00000381867 ETDBQ3ZM63 59 aa11.26□□□□□ -0.61
SNPH-201ENST00000381867 TRAV13-1A0A0B4J241 112 aa11.26□□□□□ -0.61
SNPH-201ENST00000381867 CYYR1Q96J86 154 aa11.26□□□□□ -0.61
SNPH-201ENST00000381867 V9GYV3 84 aa11.26□□□□□ -0.61
SNPH-201ENST00000381867 IGHV1-24A0A0C4DH33 117 aa11.26□□□□□ -0.61
SNPH-201ENST00000381867 SOCS3O14543 225 aa11.26□□□□□ -0.61
SNPH-201ENST00000381867 LGALS9BQ3B8N2 356 aa11.26□□□□□ -0.61
SNPH-201ENST00000381867 LGALS9CQ6DKI2 356 aa11.26□□□□□ -0.61
SNPH-201ENST00000381867 FAM231DQ6ZW35 169 aa11.26□□□□□ -0.61
SNPH-201ENST00000381867 TP53TG1Q9Y2A0 90 aa11.26□□□□□ -0.61
SNPH-201ENST00000381867 AKAP6Q13023 2319 aa11.26□□□□□ -0.61
SNPH-201ENST00000381867 COL4A4P53420 1690 aaPredicted RBP11.26□□□□□ -0.61
SNPH-201ENST00000381867 FAM223BA6NKX1 122 aa11.25□□□□□ -0.61
SNPH-201ENST00000381867 C2orf66Q6UXQ4 117 aa11.25□□□□□ -0.61
SNPH-201ENST00000381867 FAM223AQ8IWN6 122 aa11.25□□□□□ -0.61
SNPH-201ENST00000381867 ZNF726P1Q15940 193 aa11.25□□□□□ -0.61
SNPH-201ENST00000381867 LINC01356Q8N9X3 169 aa11.25□□□□□ -0.61
SNPH-201ENST00000381867 USMG5Q96IX5 58 aa11.25□□□□□ -0.61
SNPH-201ENST00000381867 IGKV1-6A0A0C4DH72 117 aa11.25□□□□□ -0.61
SNPH-201ENST00000381867 F8WEM9 126 aa11.25□□□□□ -0.61
SNPH-201ENST00000381867 A0A1W2PPM0 123 aa11.25□□□□□ -0.61
SNPH-201ENST00000381867 BVES-AS1Q5T3Y7 98 aa11.25□□□□□ -0.61
SNPH-201ENST00000381867 SMIM27A0A1W2PRY6 76 aa11.25□□□□□ -0.61
SNPH-201ENST00000381867 PAX9P55771 341 aa11.25□□□□□ -0.61
SNPH-201ENST00000381867 ATP6V0BQ99437 205 aa11.25□□□□□ -0.61
SNPH-201ENST00000381867 CACNA1HO95180 2353 aa11.24□□□□□ -0.61
SNPH-201ENST00000381867 INSP01308 110 aa11.24□□□□□ -0.61
SNPH-201ENST00000381867 OR11H6Q8NGC7 330 aa11.24□□□□□ -0.61
SNPH-201ENST00000381867 IGKV1-16P04430 117 aa11.24□□□□□ -0.61
SNPH-201ENST00000381867 CITED1Q99966 193 aa11.24□□□□□ -0.61
SNPH-201ENST00000381867 SLX1AQ9BQ83 275 aa11.24□□□□□ -0.61
SNPH-201ENST00000381867 KIF26AQ9ULI4 1882 aaPredicted RBP11.24□□□□□ -0.61
SNPH-201ENST00000381867 E7EQL1 145 aa11.24□□□□□ -0.61
SNPH-201ENST00000381867 INS-IGF2F8WCM5 200 aa11.24□□□□□ -0.61
SNPH-201ENST00000381867 IGHV3-53P01767 116 aa11.24□□□□□ -0.61
SNPH-201ENST00000381867 IFITM1P13164 125 aa11.24□□□□□ -0.61
SNPH-201ENST00000381867 A0A1W2PPI3 338 aa11.24□□□□□ -0.61
SNPH-201ENST00000381867 PMVKQ15126 192 aa11.24□□□□□ -0.61
SNPH-201ENST00000381867 TP53BP1Q12888 1972 aaPredicted RBP11.23□□□□□ -0.61
SNPH-201ENST00000381867 IGLV1-44P01699 117 aa11.23□□□□□ -0.61
SNPH-201ENST00000381867 UTF1Q5T230 341 aa11.23□□□□□ -0.61
SNPH-201ENST00000381867 GAGE12HA6NDE8 117 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms