RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 IGSF23A1L1A6 192 aa9.9□□□□□ -0.82
SHOX-202ENST00000381575 BAXQ07812 192 aa9.9□□□□□ -0.82
SHOX-202ENST00000381575 CNPY1Q3B7I2 92 aa9.9□□□□□ -0.82
SHOX-202ENST00000381575 C12orf45Q8N5I9 185 aaPredicted RBP9.9□□□□□ -0.82
SHOX-202ENST00000381575 TMEM263Q8WUH6 116 aaKnown RBP9.9□□□□□ -0.82
SHOX-202ENST00000381575 SAT2Q96F10 170 aaPredicted RBP9.9□□□□□ -0.82
SHOX-202ENST00000381575 DNAJC4Q9NNZ3 241 aa9.9□□□□□ -0.82
SHOX-202ENST00000381575 UQCC1Q9NVA1 299 aa9.9□□□□□ -0.82
SHOX-202ENST00000381575 CBY3A6NI87 242 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 H7BYZ3 331 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 CT45A10P0DMU9 189 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 MED14OSP0DP75 135 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 RAB32Q13637 225 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 SOHLH1Q5JUK2 328 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 ZNRF2Q8NHG8 242 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 C2orf50Q96LR7 162 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 ZNF586Q9NXT0 402 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 RNF24Q9Y225 148 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 WDR83OSQ9Y284 106 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 LINC00588Q9Y4M8 146 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 PXMP4Q9Y6I8 212 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 LRP1BQ9NZR2 4599 aa9.89□□□□□ -0.83
SHOX-202ENST00000381575 TRAV12-3A0A0B4J271 114 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 GAGE12BA1L429 117 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 M0R3E3 92 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 GAGE7O76087 117 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 H2AFB2P0C5Z0 115 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 GAGE12FP0CL80 117 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 GAGE12GP0CL81 117 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 GAGE12IP0CL82 117 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 TNP2Q05952 138 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 OR5I1Q13606 314 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 RAB31Q13636 194 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 Q6ZRG5 221 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 SLC39A9Q9NUM3 307 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 ABCA13Q86UQ4 5058 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 A0A0J9YY99 117 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 NBDYA0A0U1RRE5 68 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 FGF7P21781 194 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 ERCC8Q13216 396 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 GCSAMLQ5JQS6 135 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 ZNF493Q6ZR52 646 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 OR1L4Q8NGR5 311 aa9.88□□□□□ -0.83
SHOX-202ENST00000381575 LYRM2Q9NU23 88 aaPredicted RBP9.88□□□□□ -0.83
SHOX-202ENST00000381575 TRAV26-1A0A087WT03 109 aa9.87□□□□□ -0.83
SHOX-202ENST00000381575 NPIPB6E9PJ23 425 aa9.87□□□□□ -0.83
SHOX-202ENST00000381575 PYYP10082 97 aa9.87□□□□□ -0.83
SHOX-202ENST00000381575 PVALBP20472 110 aaPredicted RBP9.87□□□□□ -0.83
SHOX-202ENST00000381575 HOXA5P20719 270 aa9.87□□□□□ -0.83
SHOX-202ENST00000381575 SULT1A1P50225 295 aa9.87□□□□□ -0.83
SHOX-202ENST00000381575 FAM3BP58499 235 aaPredicted RBP9.87□□□□□ -0.83
SHOX-202ENST00000381575 CLINT1Q14677 625 aa9.87□□□□□ -0.83
SHOX-202ENST00000381575 VWC2Q2TAL6 325 aa9.87□□□□□ -0.83
SHOX-202ENST00000381575 TMEM252Q8N6L7 170 aa9.87□□□□□ -0.83
SHOX-202ENST00000381575 GPN1Q9HCN4 374 aaPredicted RBP9.87□□□□□ -0.83
SHOX-202ENST00000381575 FAM240BA0A1B0GVZ2 78 aa9.86□□□□□ -0.83
SHOX-202ENST00000381575 SIX6O95475 246 aa9.86□□□□□ -0.83
SHOX-202ENST00000381575 LEPP41159 167 aa9.86□□□□□ -0.83
SHOX-202ENST00000381575 RPL29P47914 159 aaKnown RBP9.86□□□□□ -0.83
SHOX-202ENST00000381575 CCL18P55774 89 aa9.86□□□□□ -0.83
SHOX-202ENST00000381575 IL15RAQ13261 267 aa9.86□□□□□ -0.83
SHOX-202ENST00000381575 SSX7Q7RTT5 188 aa9.86□□□□□ -0.83
SHOX-202ENST00000381575 STX12Q86Y82 276 aa9.86□□□□□ -0.83
SHOX-202ENST00000381575 CCDC28AQ8IWP9 274 aa9.86□□□□□ -0.83
SHOX-202ENST00000381575 BLNKQ8WV28 456 aa9.86□□□□□ -0.83
SHOX-202ENST00000381575 PFDN5Q99471 154 aa9.86□□□□□ -0.83
SHOX-202ENST00000381575 C20orf144Q9BQM9 153 aa9.86□□□□□ -0.83
SHOX-202ENST00000381575 TRBV19A0A075B6N1 114 aa9.85□□□□□ -0.83
SHOX-202ENST00000381575 SNURFLB1AK76 121 aa9.85□□□□□ -0.83
SHOX-202ENST00000381575 NDUFB4O95168 129 aa9.85□□□□□ -0.83
SHOX-202ENST00000381575 RLN2P04090 185 aa9.85□□□□□ -0.83
SHOX-202ENST00000381575 S100A11P31949 105 aa9.85□□□□□ -0.83
SHOX-202ENST00000381575 GUK1Q16774 197 aa9.85□□□□□ -0.83
SHOX-202ENST00000381575 Q6ZTI0 123 aa9.85□□□□□ -0.83
SHOX-202ENST00000381575 EXOC3-AS1Q8N2X6 119 aa9.85□□□□□ -0.83
SHOX-202ENST00000381575 C6orf223Q8N319 242 aa9.85□□□□□ -0.83
SHOX-202ENST00000381575 LINC00612Q8N6U2 182 aa9.85□□□□□ -0.83
SHOX-202ENST00000381575 THAP6Q8TBB0 222 aa9.85□□□□□ -0.83
SHOX-202ENST00000381575 GNPNAT1Q96EK6 184 aaPredicted RBP9.85□□□□□ -0.83
SHOX-202ENST00000381575 CCDC32Q9BV29 185 aa9.85□□□□□ -0.83
SHOX-202ENST00000381575 TMPRSS5Q9H3S3 457 aa9.85□□□□□ -0.83
SHOX-202ENST00000381575 HBG1P69891 147 aa9.84□□□□□ -0.83
SHOX-202ENST00000381575 HBG2P69892 147 aa9.84□□□□□ -0.83
SHOX-202ENST00000381575 NHLH2Q02577 135 aa9.84□□□□□ -0.83
SHOX-202ENST00000381575 CD300CQ08708 224 aa9.84□□□□□ -0.83
SHOX-202ENST00000381575 BTN1A1Q13410 526 aa9.84□□□□□ -0.83
SHOX-202ENST00000381575 KRTAP1-5Q9BYS1 174 aa9.84□□□□□ -0.83
SHOX-202ENST00000381575 IGKV2-40A0A087WW87 121 aaPredicted RBP9.83□□□□□ -0.84
SHOX-202ENST00000381575 C7orf71A4D174 169 aa9.83□□□□□ -0.84
SHOX-202ENST00000381575 IGKV2D-40P01614 121 aaPredicted RBP9.83□□□□□ -0.84
SHOX-202ENST00000381575 M6PRP20645 277 aa9.83□□□□□ -0.84
SHOX-202ENST00000381575 LRRC37A5PQ49AS3 106 aa9.83□□□□□ -0.84
SHOX-202ENST00000381575 ODF3Q96PU9 254 aa9.83□□□□□ -0.84
SHOX-202ENST00000381575 SLC25A2Q9BXI2 301 aa9.83□□□□□ -0.84
SHOX-202ENST00000381575 NPCDR1Q9BY65 106 aa9.83□□□□□ -0.84
SHOX-202ENST00000381575 KRTAP4-5Q9BYR2 181 aa9.83□□□□□ -0.84
SHOX-202ENST00000381575 GSN-AS1Q9NRJ2 163 aa9.83□□□□□ -0.84
SHOX-202ENST00000381575 TIMM9Q9Y5J7 89 aa9.83□□□□□ -0.84
SHOX-202ENST00000381575 ZNF253O75346 499 aa9.82□□□□□ -0.84
SHOX-202ENST00000381575 HIST1H1EP10412 219 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms