RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 PRRC2AP48634 2157 aaKnown RBP13.24□□□□□ -0.29
RPAIN-203ENST00000381209 A0A1W2PS18 150 aa13.23□□□□□ -0.29
RPAIN-203ENST00000381209 RBAKDNA6NC62 111 aa13.23□□□□□ -0.29
RPAIN-203ENST00000381209 SLC35B1P78383 322 aa13.23□□□□□ -0.29
RPAIN-203ENST00000381209 TMEM136Q6ZRR5 245 aa13.23□□□□□ -0.29
RPAIN-203ENST00000381209 ATP5L2Q7Z4Y8 100 aa13.23□□□□□ -0.29
RPAIN-203ENST00000381209 TMEM86BQ8N661 226 aa13.23□□□□□ -0.29
RPAIN-203ENST00000381209 IGKV2-40A0A087WW87 121 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-203ENST00000381209 IFITM10A6NMD0 228 aa13.23□□□□□ -0.29
RPAIN-203ENST00000381209 HIGD1CA8MV81 97 aa13.23□□□□□ -0.29
RPAIN-203ENST00000381209 IGKV2D-40P01614 121 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-203ENST00000381209 HLA-DQA1P01909 254 aa13.23□□□□□ -0.29
RPAIN-203ENST00000381209 ELANEP08246 267 aa13.23□□□□□ -0.29
RPAIN-203ENST00000381209 FOXE3Q13461 319 aa13.23□□□□□ -0.29
RPAIN-203ENST00000381209 LCNL1Q6ZST4 164 aa13.23□□□□□ -0.29
RPAIN-203ENST00000381209 VPS13CQ709C8 3753 aa13.22□□□□□ -0.29
RPAIN-203ENST00000381209 IGHV3OR16-13A0A075B7E8 117 aa13.22□□□□□ -0.29
RPAIN-203ENST00000381209 IGHV3-49A0A0A0MS15 119 aa13.22□□□□□ -0.29
RPAIN-203ENST00000381209 IGHV3-74A0A0B4J1X5 117 aa13.22□□□□□ -0.29
RPAIN-203ENST00000381209 SPINK4O60575 86 aa13.22□□□□□ -0.29
RPAIN-203ENST00000381209 POLQO75417 2590 aa13.22□□□□□ -0.29
RPAIN-203ENST00000381209 FRMD6-AS1P0C7T7 363 aa13.22□□□□□ -0.29
RPAIN-203ENST00000381209 CT45A10P0DMU9 189 aa13.22□□□□□ -0.29
RPAIN-203ENST00000381209 CR1P17927 2039 aa13.22□□□□□ -0.29
RPAIN-203ENST00000381209 HLA-DMBP28068 263 aa13.22□□□□□ -0.29
RPAIN-203ENST00000381209 GFI1BQ5VTD9 330 aa13.22□□□□□ -0.29
RPAIN-203ENST00000381209 MRPL54Q6P161 138 aaKnown RBP13.22□□□□□ -0.29
RPAIN-203ENST00000381209 Q8N2B8 174 aa13.22□□□□□ -0.29
RPAIN-203ENST00000381209 TRAV8-2A0A0B4J237 113 aa13.21□□□□□ -0.29
RPAIN-203ENST00000381209 K7EMT4 169 aa13.21□□□□□ -0.29
RPAIN-203ENST00000381209 SMIM6P0DI80 62 aa13.21□□□□□ -0.29
RPAIN-203ENST00000381209 S100A2P29034 98 aa13.21□□□□□ -0.29
RPAIN-203ENST00000381209 IGFL4Q6B9Z1 124 aa13.21□□□□□ -0.29
RPAIN-203ENST00000381209 C8orf86Q6ZUL3 223 aa13.21□□□□□ -0.29
RPAIN-203ENST00000381209 GPHB5Q86YW7 130 aa13.21□□□□□ -0.29
RPAIN-203ENST00000381209 SIGLECL1Q8N7X8 197 aa13.21□□□□□ -0.29
RPAIN-203ENST00000381209 PRR25Q96S07 402 aa13.21□□□□□ -0.29
RPAIN-203ENST00000381209 GPR61Q9BZJ8 451 aa13.21□□□□□ -0.29
RPAIN-203ENST00000381209 SVEP1Q4LDE5 3571 aa13.21□□□□□ -0.29
RPAIN-203ENST00000381209 SMAD7O15105 426 aaKnown RBP13.2□□□□□ -0.3
RPAIN-203ENST00000381209 CRIP1P50238 77 aa13.2□□□□□ -0.3
RPAIN-203ENST00000381209 FOXA3P55318 350 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-203ENST00000381209 FAM106AQ4KMX7 169 aa13.2□□□□□ -0.3
RPAIN-203ENST00000381209 Q71RC1 249 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-203ENST00000381209 OR2D3Q8NGH3 330 aa13.2□□□□□ -0.3
RPAIN-203ENST00000381209 MYOZ3Q8TDC0 251 aa13.2□□□□□ -0.3
RPAIN-203ENST00000381209 CRYBG3Q68DQ2 2970 aa13.2□□□□□ -0.3
RPAIN-203ENST00000381209 IGHV7-4-1A0A0J9YVY3 117 aa13.19□□□□□ -0.3
RPAIN-203ENST00000381209 A0A1B0GXF2 115 aa13.19□□□□□ -0.3
RPAIN-203ENST00000381209 ZNF705FA8MVS1 300 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-203ENST00000381209 RBPMS2Q6ZRY4 209 aaKnown RBP13.19□□□□□ -0.3
RPAIN-203ENST00000381209 TCF24Q7RTU0 167 aa13.19□□□□□ -0.3
RPAIN-203ENST00000381209 RNF152Q8N8N0 203 aa13.19□□□□□ -0.3
RPAIN-203ENST00000381209 GTSF1Q8WW33 167 aa13.19□□□□□ -0.3
RPAIN-203ENST00000381209 C12orf57Q99622 126 aa13.19□□□□□ -0.3
RPAIN-203ENST00000381209 VGLL1Q99990 258 aa13.19□□□□□ -0.3
RPAIN-203ENST00000381209 DAZ1Q9NQZ3 744 aaKnown RBP13.19□□□□□ -0.3
RPAIN-203ENST00000381209 C8orf49Q96NF6 230 aa13.18□□□□□ -0.3
RPAIN-203ENST00000381209 NDFIP1Q9BT67 221 aa13.18□□□□□ -0.3
RPAIN-203ENST00000381209 RAB4BP61018 213 aa13.18□□□□□ -0.3
RPAIN-203ENST00000381209 PDZD11Q5EBL8 140 aa13.18□□□□□ -0.3
RPAIN-203ENST00000381209 FAM162BQ5T6X4 162 aa13.18□□□□□ -0.3
RPAIN-203ENST00000381209 C10orf99Q6UWK7 81 aa13.18□□□□□ -0.3
RPAIN-203ENST00000381209 RNF182Q8N6D2 247 aa13.18□□□□□ -0.3
RPAIN-203ENST00000381209 UFC1Q9Y3C8 167 aa13.18□□□□□ -0.3
RPAIN-203ENST00000381209 PRAC2D3DTV9 90 aa13.17□□□□□ -0.3
RPAIN-203ENST00000381209 CD5LO43866 347 aa13.17□□□□□ -0.3
RPAIN-203ENST00000381209 APCSP02743 223 aa13.17□□□□□ -0.3
RPAIN-203ENST00000381209 RPLP1P05386 114 aaKnown RBP13.17□□□□□ -0.3
RPAIN-203ENST00000381209 CRISP2P16562 243 aa13.17□□□□□ -0.3
RPAIN-203ENST00000381209 BMI1P35226 326 aa13.17□□□□□ -0.3
RPAIN-203ENST00000381209 Q0VG73 95 aa13.17□□□□□ -0.3
RPAIN-203ENST00000381209 C16orf92Q96LL3 132 aa13.17□□□□□ -0.3
RPAIN-203ENST00000381209 HIST1H2BLQ99880 126 aa13.17□□□□□ -0.3
RPAIN-203ENST00000381209 ASCL2Q99929 193 aa13.17□□□□□ -0.3
RPAIN-203ENST00000381209 RHPN1-AS1Q9BWJ2 59 aa13.17□□□□□ -0.3
RPAIN-203ENST00000381209 SMPXQ9UHP9 88 aa13.17□□□□□ -0.3
RPAIN-203ENST00000381209 CHD6Q8TD26 2715 aa13.17□□□□□ -0.3
RPAIN-203ENST00000381209 CELSR2Q9HCU4 2923 aa13.16□□□□□ -0.3
RPAIN-203ENST00000381209 SH2D1AO60880 128 aa13.16□□□□□ -0.3
RPAIN-203ENST00000381209 LGALS1P09382 135 aaKnown RBP13.16□□□□□ -0.3
RPAIN-203ENST00000381209 PRB4P10163 310 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-203ENST00000381209 HBBP68871 147 aa13.16□□□□□ -0.3
RPAIN-203ENST00000381209 Q6AWC8 147 aa13.16□□□□□ -0.3
RPAIN-203ENST00000381209 PGLYRP4Q96LB8 373 aa13.16□□□□□ -0.3
RPAIN-203ENST00000381209 UBE2E2Q96LR5 201 aa13.16□□□□□ -0.3
RPAIN-203ENST00000381209 PPP1R14DQ9NXH3 145 aa13.16□□□□□ -0.3
RPAIN-203ENST00000381209 ABCA12Q86UK0 2595 aa13.15□□□□□ -0.3
RPAIN-203ENST00000381209 SOCS3O14543 225 aa13.15□□□□□ -0.3
RPAIN-203ENST00000381209 FABP4P15090 132 aa13.15□□□□□ -0.3
RPAIN-203ENST00000381209 SRSF2Q01130 221 aaKnown RBP13.15□□□□□ -0.3
RPAIN-203ENST00000381209 KRTAP1-1Q07627 177 aa13.15□□□□□ -0.3
RPAIN-203ENST00000381209 TM4SF20Q53R12 229 aa13.15□□□□□ -0.3
RPAIN-203ENST00000381209 IL17RELQ6ZVW7 336 aa13.15□□□□□ -0.3
RPAIN-203ENST00000381209 OR10D4PQ8NGN7 298 aa13.15□□□□□ -0.3
RPAIN-203ENST00000381209 Q8TAT8 98 aa13.15□□□□□ -0.3
RPAIN-203ENST00000381209 CSPG4Q6UVK1 2322 aa13.14□□□□□ -0.31
RPAIN-203ENST00000381209 ERCC8Q13216 396 aa13.14□□□□□ -0.31
RPAIN-203ENST00000381209 GDF5OSQ5U4N7 250 aa13.14□□□□□ -0.31
RPAIN-203ENST00000381209 C9orf47Q6ZRZ4 202 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms