RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 C19orf71A6NCJ1 209 aa16.41■□□□□ 0.22
GMDS-202ENST00000380815 K7EMT4 169 aa16.41■□□□□ 0.22
GMDS-202ENST00000380815 LCN12Q6JVE5 192 aa16.41■□□□□ 0.22
GMDS-202ENST00000380815 LGALS1P09382 135 aaKnown RBP16.41■□□□□ 0.22
GMDS-202ENST00000380815 SCGB2A2Q13296 93 aa16.41■□□□□ 0.22
GMDS-202ENST00000380815 IGFL4Q6B9Z1 124 aa16.41■□□□□ 0.22
GMDS-202ENST00000380815 LINC00322Q6ZN03 302 aaPredicted RBP16.41■□□□□ 0.22
GMDS-202ENST00000380815 C8orf86Q6ZUL3 223 aa16.41■□□□□ 0.22
GMDS-202ENST00000380815 TMEM160Q9NX00 188 aa16.41■□□□□ 0.22
GMDS-202ENST00000380815 IGHV7-4-1A0A0J9YVY3 117 aa16.4■□□□□ 0.22
GMDS-202ENST00000380815 C5orf52A6NGY3 159 aa16.4■□□□□ 0.22
GMDS-202ENST00000380815 HIST1H2BKO60814 126 aa16.4■□□□□ 0.22
GMDS-202ENST00000380815 HIST1H2BJP06899 126 aa16.4■□□□□ 0.22
GMDS-202ENST00000380815 HIST1H2BOP23527 126 aa16.4■□□□□ 0.22
GMDS-202ENST00000380815 HIST1H2BBP33778 126 aa16.4■□□□□ 0.22
GMDS-202ENST00000380815 HIST1H2BDP58876 126 aa16.4■□□□□ 0.22
GMDS-202ENST00000380815 HIST1H2BCP62807 126 aa16.4■□□□□ 0.22
GMDS-202ENST00000380815 HIST2H2BEQ16778 126 aa16.4■□□□□ 0.22
GMDS-202ENST00000380815 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.4■□□□□ 0.22
GMDS-202ENST00000380815 FRZBQ92765 325 aa16.4■□□□□ 0.22
GMDS-202ENST00000380815 HIST1H2BHQ93079 126 aa16.4■□□□□ 0.22
GMDS-202ENST00000380815 HIST1H2BNQ99877 126 aa16.4■□□□□ 0.22
GMDS-202ENST00000380815 HIST1H2BMQ99879 126 aa16.4■□□□□ 0.22
GMDS-202ENST00000380815 FAM181BA6NEQ2 426 aa16.39■□□□□ 0.21
GMDS-202ENST00000380815 HLA-DMBP28068 263 aa16.39■□□□□ 0.21
GMDS-202ENST00000380815 SNRPEP62304 92 aaKnown RBP16.39■□□□□ 0.21
GMDS-202ENST00000380815 ACTL10Q5JWF8 245 aa16.39■□□□□ 0.21
GMDS-202ENST00000380815 CLEC5AQ9NY25 188 aa16.39■□□□□ 0.21
GMDS-202ENST00000380815 IGKV2-40A0A087WW87 121 aaPredicted RBP16.38■□□□□ 0.21
GMDS-202ENST00000380815 TRAV8-2A0A0B4J237 113 aa16.38■□□□□ 0.21
GMDS-202ENST00000380815 ZNF705FA8MVS1 300 aaPredicted RBP16.38■□□□□ 0.21
GMDS-202ENST00000380815 CA1P00915 261 aaPredicted RBP16.38■□□□□ 0.21
GMDS-202ENST00000380815 IGKV2D-40P01614 121 aaPredicted RBP16.38■□□□□ 0.21
GMDS-202ENST00000380815 P01737 135 aa16.38■□□□□ 0.21
GMDS-202ENST00000380815 RPL19P84098 196 aaKnown RBP16.38■□□□□ 0.21
GMDS-202ENST00000380815 TM4SF20Q53R12 229 aa16.38■□□□□ 0.21
GMDS-202ENST00000380815 CT83Q5H943 113 aa16.38■□□□□ 0.21
GMDS-202ENST00000380815 MRPL53Q96EL3 112 aaKnown RBP16.38■□□□□ 0.21
GMDS-202ENST00000380815 DAZAP1Q96EP5 407 aaKnown RBP16.38■□□□□ 0.21
GMDS-202ENST00000380815 SAV1Q9H4B6 383 aaPredicted RBP16.38■□□□□ 0.21
GMDS-202ENST00000380815 TRGC1P0CF51 173 aa16.38■□□□□ 0.21
GMDS-202ENST00000380815 PRB4P10163 310 aaPredicted RBP16.38■□□□□ 0.21
GMDS-202ENST00000380815 GBGT1Q8N5D6 347 aa16.38■□□□□ 0.21
GMDS-202ENST00000380815 KLHDC1Q8N7A1 406 aa16.38■□□□□ 0.21
GMDS-202ENST00000380815 TSKUQ8WUA8 353 aa16.38■□□□□ 0.21
GMDS-202ENST00000380815 ZC2HC1AQ96GY0 325 aa16.38■□□□□ 0.21
GMDS-202ENST00000380815 RPP21Q9H633 154 aaKnown RBP16.38■□□□□ 0.21
GMDS-202ENST00000380815 ESM1Q9NQ30 184 aa16.38■□□□□ 0.21
GMDS-202ENST00000380815 UFC1Q9Y3C8 167 aa16.38■□□□□ 0.21
GMDS-202ENST00000380815 RBAKDNA6NC62 111 aa16.37■□□□□ 0.21
GMDS-202ENST00000380815 NPIPB6E9PJ23 425 aa16.37■□□□□ 0.21
GMDS-202ENST00000380815 SAPCD1Q5SSQ6 148 aa16.37■□□□□ 0.21
GMDS-202ENST00000380815 RNF182Q8N6D2 247 aa16.37■□□□□ 0.21
GMDS-202ENST00000380815 RHPN1-AS1Q9BWJ2 59 aa16.37■□□□□ 0.21
GMDS-202ENST00000380815 SMPXQ9UHP9 88 aa16.37■□□□□ 0.21
GMDS-202ENST00000380815 MYO9AB2RTY4 2548 aa16.37■□□□□ 0.21
GMDS-202ENST00000380815 TCL1AP56279 114 aa16.36■□□□□ 0.21
GMDS-202ENST00000380815 Q6ZSV7 163 aa16.36■□□□□ 0.21
GMDS-202ENST00000380815 Q71RC1 249 aaPredicted RBP16.36■□□□□ 0.21
GMDS-202ENST00000380815 COX8CQ7Z4L0 72 aa16.36■□□□□ 0.21
GMDS-202ENST00000380815 VGLL1Q99990 258 aa16.36■□□□□ 0.21
GMDS-202ENST00000380815 NAT8BQ9UHF3 227 aa16.36■□□□□ 0.21
GMDS-202ENST00000380815 IZUMO1RA6ND01 250 aa16.35■□□□□ 0.21
GMDS-202ENST00000380815 OR4B1Q8NGF8 309 aa16.35■□□□□ 0.21
GMDS-202ENST00000380815 C16orf92Q96LL3 132 aa16.35■□□□□ 0.21
GMDS-202ENST00000380815 PRR25Q96S07 402 aa16.35■□□□□ 0.21
GMDS-202ENST00000380815 TRAPPC1Q9Y5R8 145 aa16.35■□□□□ 0.21
GMDS-202ENST00000380815 A8MWL6 223 aa16.34■□□□□ 0.21
GMDS-202ENST00000380815 FABP9Q0Z7S8 132 aa16.34■□□□□ 0.21
GMDS-202ENST00000380815 PRAC2D3DTV9 90 aa16.33■□□□□ 0.21
GMDS-202ENST00000380815 UBE2CO00762 179 aa16.33■□□□□ 0.21
GMDS-202ENST00000380815 CT45A10P0DMU9 189 aa16.33■□□□□ 0.21
GMDS-202ENST00000380815 REC114Q7Z4M0 266 aa16.33■□□□□ 0.21
GMDS-202ENST00000380815 NEU1Q99519 415 aa16.33■□□□□ 0.21
GMDS-202ENST00000380815 ASCL2Q99929 193 aa16.33■□□□□ 0.21
GMDS-202ENST00000380815 GFRA4Q9GZZ7 299 aa16.33■□□□□ 0.21
GMDS-202ENST00000380815 A8MWP6 167 aa16.33■□□□□ 0.2
GMDS-202ENST00000380815 LGALS9O00182 355 aa16.33■□□□□ 0.2
GMDS-202ENST00000380815 BMI1P35226 326 aa16.33■□□□□ 0.2
GMDS-202ENST00000380815 CDX1P47902 265 aaPredicted RBP16.33■□□□□ 0.2
GMDS-202ENST00000380815 COX19Q49B96 90 aa16.33■□□□□ 0.2
GMDS-202ENST00000380815 C8orf49Q96NF6 230 aa16.33■□□□□ 0.2
GMDS-202ENST00000380815 NRN1Q9NPD7 142 aa16.33■□□□□ 0.2
GMDS-202ENST00000380815 IGHV4OR15-8A0A075B7B6 117 aa16.32■□□□□ 0.2
GMDS-202ENST00000380815 A0A087WW49 117 aa16.32■□□□□ 0.2
GMDS-202ENST00000380815 FAM231BA6NCW3 169 aa16.32■□□□□ 0.2
GMDS-202ENST00000380815 SOCS3O14543 225 aa16.32■□□□□ 0.2
GMDS-202ENST00000380815 CRIP1P50238 77 aa16.32■□□□□ 0.2
GMDS-202ENST00000380815 NDUFA6P56556 154 aa16.32■□□□□ 0.2
GMDS-202ENST00000380815 NUP35Q8NFH5 326 aa16.32■□□□□ 0.2
GMDS-202ENST00000380815 GNB1LQ9BYB4 327 aa16.32■□□□□ 0.2
GMDS-202ENST00000380815 TMEM213A2RRL7 107 aa16.31■□□□□ 0.2
GMDS-202ENST00000380815 HIGD1CA8MV81 97 aa16.31■□□□□ 0.2
GMDS-202ENST00000380815 RNASE1P07998 156 aaKnown RBP16.31■□□□□ 0.2
GMDS-202ENST00000380815 WDR73Q6P4I2 378 aa16.31■□□□□ 0.2
GMDS-202ENST00000380815 NOTCH2Q04721 2471 aa16.31■□□□□ 0.2
GMDS-202ENST00000380815 SPINK4O60575 86 aa16.31■□□□□ 0.2
GMDS-202ENST00000380815 SRD5A1P18405 259 aa16.31■□□□□ 0.2
GMDS-202ENST00000380815 CBLN1P23435 193 aa16.31■□□□□ 0.2
GMDS-202ENST00000380815 HOXD3P31249 432 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms