RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 STAG3L2P0CL84 134 aa8.78□□□□□ -1
PCNA-201ENST00000379143 STAG3L3P0CL85 134 aa8.78□□□□□ -1
PCNA-201ENST00000379143 IGFL4Q6B9Z1 124 aa8.78□□□□□ -1
PCNA-201ENST00000379143 Q6ZWC4 215 aa8.78□□□□□ -1
PCNA-201ENST00000379143 C9orf62Q8N4C0 152 aa8.78□□□□□ -1
PCNA-201ENST00000379143 MRPL53Q96EL3 112 aaKnown RBP8.78□□□□□ -1
PCNA-201ENST00000379143 ZNF503Q96F45 646 aa8.78□□□□□ -1
PCNA-201ENST00000379143 SPATA25Q9BR10 227 aa8.78□□□□□ -1
PCNA-201ENST00000379143 NDUFB4O95168 129 aa8.77□□□□□ -1.01
PCNA-201ENST00000379143 ARL14EPLP0DKL9 152 aa8.77□□□□□ -1.01
PCNA-201ENST00000379143 GDF5OSQ5U4N7 250 aa8.77□□□□□ -1.01
PCNA-201ENST00000379143 DPPA3Q6W0C5 159 aa8.77□□□□□ -1.01
PCNA-201ENST00000379143 RPUSD4Q96CM3 377 aaKnown RBP8.77□□□□□ -1.01
PCNA-201ENST00000379143 C1QTNF4Q9BXJ3 329 aa8.77□□□□□ -1.01
PCNA-201ENST00000379143 TENM3Q9P273 2699 aa8.76□□□□□ -1.01
PCNA-201ENST00000379143 F6UB75 175 aa8.76□□□□□ -1.01
PCNA-201ENST00000379143 HMGB3O15347 200 aaKnown RBP8.76□□□□□ -1.01
PCNA-201ENST00000379143 HLA-DMBP28068 263 aa8.76□□□□□ -1.01
PCNA-201ENST00000379143 RAB5CP51148 216 aa8.76□□□□□ -1.01
PCNA-201ENST00000379143 FAM74A1Q5RGS3 127 aa8.76□□□□□ -1.01
PCNA-201ENST00000379143 OR4B1Q8NGF8 309 aa8.76□□□□□ -1.01
PCNA-201ENST00000379143 OR8A1Q8NGG7 326 aa8.76□□□□□ -1.01
PCNA-201ENST00000379143 OR10J6PQ8NGY7 276 aa8.76□□□□□ -1.01
PCNA-201ENST00000379143 TMED6Q8WW62 240 aa8.76□□□□□ -1.01
PCNA-201ENST00000379143 TMEM167BQ9NRX6 74 aa8.76□□□□□ -1.01
PCNA-201ENST00000379143 TP53TG1Q9Y2A0 90 aa8.76□□□□□ -1.01
PCNA-201ENST00000379143 A8MTW9 85 aa8.75□□□□□ -1.01
PCNA-201ENST00000379143 CA1P00915 261 aaPredicted RBP8.75□□□□□ -1.01
PCNA-201ENST00000379143 GCHFRP30047 84 aa8.75□□□□□ -1.01
PCNA-201ENST00000379143 RANP62826 216 aaKnown RBP8.75□□□□□ -1.01
PCNA-201ENST00000379143 ICAM4Q14773 271 aa8.75□□□□□ -1.01
PCNA-201ENST00000379143 EXOC3-AS1Q8N2X6 119 aa8.75□□□□□ -1.01
PCNA-201ENST00000379143 SUN5Q8TC36 379 aa8.75□□□□□ -1.01
PCNA-201ENST00000379143 PHYHIPLQ96FC7 376 aa8.75□□□□□ -1.01
PCNA-201ENST00000379143 ZNF705FA8MVS1 300 aaPredicted RBP8.74□□□□□ -1.01
PCNA-201ENST00000379143 EIF3GO75821 320 aaKnown RBP eCLIP8.74□□□□□ -1.01
PCNA-201ENST00000379143 IGKV3-20P01619 116 aa8.74□□□□□ -1.01
PCNA-201ENST00000379143 AMBPP02760 352 aa8.74□□□□□ -1.01
PCNA-201ENST00000379143 CSN1S1P47710 185 aa8.74□□□□□ -1.01
PCNA-201ENST00000379143 CNN1P51911 297 aaKnown RBP8.74□□□□□ -1.01
PCNA-201ENST00000379143 DEFB1P60022 68 aa8.74□□□□□ -1.01
PCNA-201ENST00000379143 HIST1H1AQ02539 215 aaPredicted RBP8.74□□□□□ -1.01
PCNA-201ENST00000379143 ZNF726P1Q15940 193 aa8.74□□□□□ -1.01
PCNA-201ENST00000379143 ARL6IP6Q8N6S5 226 aa8.74□□□□□ -1.01
PCNA-201ENST00000379143 RXFP4Q8TDU9 374 aa8.74□□□□□ -1.01
PCNA-201ENST00000379143 RCHY1Q96PM5 261 aa8.74□□□□□ -1.01
PCNA-201ENST00000379143 Q9H3A6 140 aa8.74□□□□□ -1.01
PCNA-201ENST00000379143 PGPEP1Q9NXJ5 209 aa8.74□□□□□ -1.01
PCNA-201ENST00000379143 MAP1LC3B2A6NCE7 125 aa8.73□□□□□ -1.01
PCNA-201ENST00000379143 M0R3E3 92 aa8.73□□□□□ -1.01
PCNA-201ENST00000379143 SPRY2O43597 315 aa8.73□□□□□ -1.01
PCNA-201ENST00000379143 DEFB135Q30KP9 77 aa8.73□□□□□ -1.01
PCNA-201ENST00000379143 SSX7Q7RTT5 188 aa8.73□□□□□ -1.01
PCNA-201ENST00000379143 IQCF2Q8IXL9 164 aa8.73□□□□□ -1.01
PCNA-201ENST00000379143 CMTM2Q8TAZ6 248 aa8.73□□□□□ -1.01
PCNA-201ENST00000379143 FAM213BQ8TBF2 198 aa8.73□□□□□ -1.01
PCNA-201ENST00000379143 RNF183Q96D59 192 aa8.73□□□□□ -1.01
PCNA-201ENST00000379143 MAP1LC3BQ9GZQ8 125 aa8.73□□□□□ -1.01
PCNA-201ENST00000379143 OTORQ9NRC9 128 aa8.73□□□□□ -1.01
PCNA-201ENST00000379143 PPP1R14DQ9NXH3 145 aa8.73□□□□□ -1.01
PCNA-201ENST00000379143 U3KQK5 164 aa8.73□□□□□ -1.01
PCNA-201ENST00000379143 PGPA6NDG6 321 aa8.72□□□□□ -1.01
PCNA-201ENST00000379143 ZNF705DP0CH99 300 aaPredicted RBP8.72□□□□□ -1.01
PCNA-201ENST00000379143 ZNF705BP0CI00 300 aaPredicted RBP8.72□□□□□ -1.01
PCNA-201ENST00000379143 SULT1A2P50226 295 aa8.72□□□□□ -1.01
PCNA-201ENST00000379143 NKX2-5P52952 324 aaPredicted RBP8.72□□□□□ -1.01
PCNA-201ENST00000379143 MBD3L1Q8WWY6 194 aa8.72□□□□□ -1.01
PCNA-201ENST00000379143 OVOL2Q9BRP0 275 aa8.72□□□□□ -1.01
PCNA-201ENST00000379143 AGRNO00468 2067 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 A0A1W2PRE2 83 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 RBAKDNA6NC62 111 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 PRAC2D3DTV9 90 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 NPIPB6E9PJ23 425 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 TEX46H3BTG2 121 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 BOLA2-SMG1P6H3BVE0 249 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 GIG44P09565 113 aaPredicted RBP8.71□□□□□ -1.02
PCNA-201ENST00000379143 H2AFB1P0C5Y9 115 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 FHITP49789 147 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 FGF8P55075 233 aaPredicted RBP8.71□□□□□ -1.02
PCNA-201ENST00000379143 TMEM78Q5T7P6 136 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 AMTNQ6UX39 209 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 SFT2D1Q8WV19 159 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 LINC00477Q96M19 166 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 ODF3Q96PU9 254 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 NKX6-2Q9C056 277 aaPredicted RBP8.71□□□□□ -1.02
PCNA-201ENST00000379143 SLC35B3Q9H1N7 401 aa8.71□□□□□ -1.02
PCNA-201ENST00000379143 SERTM2A0A1B0GWG4 89 aa8.7□□□□□ -1.02
PCNA-201ENST00000379143 SLC25A5P05141 298 aaKnown RBP8.7□□□□□ -1.02
PCNA-201ENST00000379143 TSPOP30536 169 aa8.7□□□□□ -1.02
PCNA-201ENST00000379143 CDKN1BP46527 198 aa8.7□□□□□ -1.02
PCNA-201ENST00000379143 C9orf47Q6ZRZ4 202 aa8.7□□□□□ -1.02
PCNA-201ENST00000379143 CSNK1G2-AS1Q8NCQ2 148 aa8.7□□□□□ -1.02
PCNA-201ENST00000379143 RETNQ9HD89 108 aa8.7□□□□□ -1.02
PCNA-201ENST00000379143 XCL2Q9UBD3 114 aa8.7□□□□□ -1.02
PCNA-201ENST00000379143 ARL2-SNX15V9GYD0 113 aa8.7□□□□□ -1.02
PCNA-201ENST00000379143 DIRC3C9JPN6 131 aa8.69□□□□□ -1.02
PCNA-201ENST00000379143 PPT1P50897 306 aa8.69□□□□□ -1.02
PCNA-201ENST00000379143 SPINK13Q1W4C9 94 aa8.69□□□□□ -1.02
PCNA-201ENST00000379143 C5orf17Q8NAS9 161 aa8.69□□□□□ -1.02
PCNA-201ENST00000379143 IGF2BP2-AS1Q96M15 143 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms