RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 FLG2Q5D862 2391 aaPredicted RBP12.22□□□□□ -0.45
PDLIM4-202ENST00000379018 PIGBOS1A0A0B4J2F0 54 aa12.22□□□□□ -0.45
PDLIM4-202ENST00000379018 PMS2P5A8MQ11 134 aa12.22□□□□□ -0.45
PDLIM4-202ENST00000379018 ERVFC1-1P60608 527 aa12.22□□□□□ -0.45
PDLIM4-202ENST00000379018 Q6ZRN7 208 aaPredicted RBP12.22□□□□□ -0.45
PDLIM4-202ENST00000379018 Q6ZTI0 123 aa12.22□□□□□ -0.45
PDLIM4-202ENST00000379018 TCTE3Q8IZS6 198 aa12.22□□□□□ -0.45
PDLIM4-202ENST00000379018 TOMM5Q8N4H5 51 aa12.22□□□□□ -0.45
PDLIM4-202ENST00000379018 ZBTB8BQ8NAP8 495 aaPredicted RBP12.22□□□□□ -0.45
PDLIM4-202ENST00000379018 TNFRSF18Q9Y5U5 241 aa12.22□□□□□ -0.45
PDLIM4-202ENST00000379018 SLC25A6P12236 298 aa12.21□□□□□ -0.45
PDLIM4-202ENST00000379018 XGP55808 180 aa12.21□□□□□ -0.45
PDLIM4-202ENST00000379018 TRGV2A0A075B6R0 118 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 A0A096LPF7 62 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 TRAV12-3A0A0B4J271 114 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 PRAC2D3DTV9 90 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 SIVA1O15304 175 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 CCNKO75909 580 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 SMR3BP02814 79 aaPredicted RBP12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 DNAH10OSP0CZ25 163 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 SLC38A11Q08AI6 406 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 TMEM128Q5BJH2 165 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 VSIG2Q96IQ7 327 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 ST6GAL2Q96JF0 529 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 C20orf144Q9BQM9 153 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 ARV1Q9H2C2 271 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 PGPEP1Q9NXJ5 209 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 MDFICQ9P1T7 246 aa12.2□□□□□ -0.46
PDLIM4-202ENST00000379018 FAT1Q14517 4588 aa12.19□□□□□ -0.46
PDLIM4-202ENST00000379018 H3BNG1 76 aa12.19□□□□□ -0.46
PDLIM4-202ENST00000379018 PRAF2O60831 178 aa12.19□□□□□ -0.46
PDLIM4-202ENST00000379018 POLR2GP62487 172 aaKnown RBP eCLIP12.19□□□□□ -0.46
PDLIM4-202ENST00000379018 PPP1R1AQ13522 171 aa12.19□□□□□ -0.46
PDLIM4-202ENST00000379018 LCN15Q6UWW0 184 aa12.19□□□□□ -0.46
PDLIM4-202ENST00000379018 ZNF331Q9NQX6 463 aaPredicted RBP12.19□□□□□ -0.46
PDLIM4-202ENST00000379018 PSENENQ9NZ42 101 aa12.19□□□□□ -0.46
PDLIM4-202ENST00000379018 INMT-MINDY4F8WBC2 141 aa12.18□□□□□ -0.46
PDLIM4-202ENST00000379018 SLC17A3O00476 420 aa12.18□□□□□ -0.46
PDLIM4-202ENST00000379018 SSSCA1O60232 199 aa12.18□□□□□ -0.46
PDLIM4-202ENST00000379018 NXPH4O95158 308 aa12.18□□□□□ -0.46
PDLIM4-202ENST00000379018 IFNA5P01569 189 aa12.18□□□□□ -0.46
PDLIM4-202ENST00000379018 FAUP35544 74 aaKnown RBP12.18□□□□□ -0.46
PDLIM4-202ENST00000379018 PLP1P60201 277 aa12.18□□□□□ -0.46
PDLIM4-202ENST00000379018 KRTAP10-1P60331 282 aa12.18□□□□□ -0.46
PDLIM4-202ENST00000379018 HAMPP81172 84 aa12.18□□□□□ -0.46
PDLIM4-202ENST00000379018 PATE2Q6UY27 113 aa12.18□□□□□ -0.46
PDLIM4-202ENST00000379018 S100A7AQ86SG5 101 aa12.18□□□□□ -0.46
PDLIM4-202ENST00000379018 SLC50A1Q9BRV3 221 aa12.18□□□□□ -0.46
PDLIM4-202ENST00000379018 TRGV1A0A0A0MS02 117 aa12.17□□□□□ -0.46
PDLIM4-202ENST00000379018 LINC00854A0A1B0GVQ3 168 aa12.17□□□□□ -0.46
PDLIM4-202ENST00000379018 MRPS12O15235 138 aaKnown RBP12.17□□□□□ -0.46
PDLIM4-202ENST00000379018 SFT2D2O95562 160 aa12.17□□□□□ -0.46
PDLIM4-202ENST00000379018 TCRBP04435 133 aa12.17□□□□□ -0.46
PDLIM4-202ENST00000379018 SELENOTP62341 195 aa12.17□□□□□ -0.46
PDLIM4-202ENST00000379018 CD300CQ08708 224 aa12.17□□□□□ -0.46
PDLIM4-202ENST00000379018 LRTM2Q8N967 370 aa12.17□□□□□ -0.46
PDLIM4-202ENST00000379018 ALG5Q9Y673 324 aa12.17□□□□□ -0.46
PDLIM4-202ENST00000379018 RGS13O14921 159 aa12.16□□□□□ -0.46
PDLIM4-202ENST00000379018 IGHV3-53P01767 116 aa12.16□□□□□ -0.46
PDLIM4-202ENST00000379018 METTL15P1P0C7V9 234 aa12.16□□□□□ -0.46
PDLIM4-202ENST00000379018 CXCL2P19875 107 aa12.16□□□□□ -0.46
PDLIM4-202ENST00000379018 CDPF1Q6NVV7 123 aa12.16□□□□□ -0.46
PDLIM4-202ENST00000379018 LINC00305Q7Z4B0 112 aa12.16□□□□□ -0.46
PDLIM4-202ENST00000379018 GSN-AS1Q9NRJ2 163 aa12.16□□□□□ -0.46
PDLIM4-202ENST00000379018 CT45A10P0DMU9 189 aa12.15□□□□□ -0.46
PDLIM4-202ENST00000379018 LEPP41159 167 aa12.15□□□□□ -0.46
PDLIM4-202ENST00000379018 MGAT4CQ9UBM8 478 aa12.15□□□□□ -0.46
PDLIM4-202ENST00000379018 VPS13BQ7Z7G8 4022 aa12.15□□□□□ -0.46
PDLIM4-202ENST00000379018 MYCBP2O75592 4640 aa12.14□□□□□ -0.47
PDLIM4-202ENST00000379018 GOSR2O14653 212 aa12.14□□□□□ -0.47
PDLIM4-202ENST00000379018 COX7A2P2O60397 106 aa12.14□□□□□ -0.47
PDLIM4-202ENST00000379018 SCGB1D2O95969 90 aa12.14□□□□□ -0.47
PDLIM4-202ENST00000379018 DAZ2Q13117 558 aaKnown RBP12.14□□□□□ -0.47
PDLIM4-202ENST00000379018 ICAM4Q14773 271 aa12.14□□□□□ -0.47
PDLIM4-202ENST00000379018 BPIFA4PQ86YQ2 179 aa12.14□□□□□ -0.47
PDLIM4-202ENST00000379018 C18orf15Q96N68 181 aa12.14□□□□□ -0.47
PDLIM4-202ENST00000379018 PYGO2Q9BRQ0 406 aa12.14□□□□□ -0.47
PDLIM4-202ENST00000379018 FUT9Q9Y231 359 aa12.14□□□□□ -0.47
PDLIM4-202ENST00000379018 ICOSQ9Y6W8 199 aa12.14□□□□□ -0.47
PDLIM4-202ENST00000379018 A0A087WTM6 91 aa12.13□□□□□ -0.47
PDLIM4-202ENST00000379018 PAX4O43316 350 aa12.13□□□□□ -0.47
PDLIM4-202ENST00000379018 C1QBP02746 253 aa12.13□□□□□ -0.47
PDLIM4-202ENST00000379018 ZFP69Q49AA0 526 aa12.13□□□□□ -0.47
PDLIM4-202ENST00000379018 MORN5Q5VZ52 161 aa12.13□□□□□ -0.47
PDLIM4-202ENST00000379018 TEPPQ6URK8 271 aa12.13□□□□□ -0.47
PDLIM4-202ENST00000379018 ZNF431Q8TF32 576 aaPredicted RBP12.13□□□□□ -0.47
PDLIM4-202ENST00000379018 NPVFQ9HCQ7 196 aa12.13□□□□□ -0.47
PDLIM4-202ENST00000379018 RNF24Q9Y225 148 aa12.13□□□□□ -0.47
PDLIM4-202ENST00000379018 OR10P1Q8NGE3 313 aa12.12□□□□□ -0.47
PDLIM4-202ENST00000379018 ASB13Q8WXK3 278 aa12.12□□□□□ -0.47
PDLIM4-202ENST00000379018 C20orf85Q9H1P6 137 aa12.12□□□□□ -0.47
PDLIM4-202ENST00000379018 NUDT15Q9NV35 164 aa12.12□□□□□ -0.47
PDLIM4-202ENST00000379018 PXMP4Q9Y6I8 212 aa12.12□□□□□ -0.47
PDLIM4-202ENST00000379018 AGPAT2O15120 278 aa12.11□□□□□ -0.47
PDLIM4-202ENST00000379018 NDUFB6O95139 128 aa12.11□□□□□ -0.47
PDLIM4-202ENST00000379018 H2AFB2P0C5Z0 115 aa12.11□□□□□ -0.47
PDLIM4-202ENST00000379018 ID3Q02535 119 aa12.11□□□□□ -0.47
PDLIM4-202ENST00000379018 ERCC8Q13216 396 aa12.11□□□□□ -0.47
PDLIM4-202ENST00000379018 OPCMLQ14982 345 aa12.11□□□□□ -0.47
PDLIM4-202ENST00000379018 ZNF546Q86UE3 836 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms