RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 ZNF479Q96JC4 524 aa9.06□□□□□ -0.96
RPGR-203ENST00000378505 MTURNQ8N3F0 131 aa9.05□□□□□ -0.96
RPGR-203ENST00000378505 FCN3O75636 299 aa9.05□□□□□ -0.96
RPGR-203ENST00000378505 SCGB1A1P11684 91 aa9.05□□□□□ -0.96
RPGR-203ENST00000378505 FXYD7P58549 80 aa9.05□□□□□ -0.96
RPGR-203ENST00000378505 VCYO14598 125 aa9.05□□□□□ -0.96
RPGR-203ENST00000378505 SFTA2Q6UW10 78 aa9.05□□□□□ -0.96
RPGR-203ENST00000378505 BCL6BQ8N143 479 aaPredicted RBP9.05□□□□□ -0.96
RPGR-203ENST00000378505 TMEM158Q8WZ71 300 aa9.05□□□□□ -0.96
RPGR-203ENST00000378505 UNQ6494/PRO21346Q6UXR6 183 aa9.05□□□□□ -0.96
RPGR-203ENST00000378505 C14orf178Q8N769 122 aaPredicted RBP9.05□□□□□ -0.96
RPGR-203ENST00000378505 POLR3KQ9Y2Y1 108 aaPredicted RBP9.05□□□□□ -0.96
RPGR-203ENST00000378505 CUL9Q8IWT3 2517 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 ATP6V0E1O15342 81 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 EMP1P54849 157 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 ZC2HC1BQ5TFG8 222 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 MEGF9Q9H1U4 602 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 TRAV12-3A0A0B4J271 114 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 SMKR1H3BMG3 65 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 ZNF876PQ49A33 203 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 SAMD5Q5TGI4 173 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 DAZ1Q9NQZ3 744 aaKnown RBP9.04□□□□□ -0.96
RPGR-203ENST00000378505 TPSG1Q9NRR2 321 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 TMEM14CQ9P0S9 112 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 RNASE1P07998 156 aaKnown RBP9.04□□□□□ -0.96
RPGR-203ENST00000378505 SELENOKQ9Y6D0 94 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 TECTAO75443 2155 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 A0A087X0K7 114 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 VWC2Q2TAL6 325 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 THAP8Q8NA92 274 aa9.04□□□□□ -0.96
RPGR-203ENST00000378505 OVOL3O00110 214 aa9.03□□□□□ -0.96
RPGR-203ENST00000378505 NDUFS8O00217 210 aa9.03□□□□□ -0.96
RPGR-203ENST00000378505 IGFL2Q6UWQ7 119 aa9.03□□□□□ -0.96
RPGR-203ENST00000378505 C11orf44Q8N8P7 122 aa9.03□□□□□ -0.96
RPGR-203ENST00000378505 TRAV2A0A0B4J234 112 aa9.03□□□□□ -0.96
RPGR-203ENST00000378505 IGLC1P0CG04 106 aa9.03□□□□□ -0.96
RPGR-203ENST00000378505 SLC25A16P16260 332 aa9.03□□□□□ -0.96
RPGR-203ENST00000378505 ERCC8Q13216 396 aa9.03□□□□□ -0.96
RPGR-203ENST00000378505 COL4A3Q01955 1670 aa9.03□□□□□ -0.96
RPGR-203ENST00000378505 FAM104BQ5XKR9 115 aa9.03□□□□□ -0.96
RPGR-203ENST00000378505 CMC4P56277 68 aaPredicted RBP9.03□□□□□ -0.96
RPGR-203ENST00000378505 DIAPH2-AS1Q14236 149 aa9.03□□□□□ -0.96
RPGR-203ENST00000378505 SMIM27A0A1W2PRY6 76 aa9.02□□□□□ -0.97
RPGR-203ENST00000378505 TMEM213A2RRL7 107 aa9.02□□□□□ -0.97
RPGR-203ENST00000378505 TNFRSF6BO95407 300 aa9.02□□□□□ -0.97
RPGR-203ENST00000378505 RCHY1Q96PM5 261 aa9.02□□□□□ -0.97
RPGR-203ENST00000378505 CSPG4Q6UVK1 2322 aa9.02□□□□□ -0.97
RPGR-203ENST00000378505 IGKV3D-20A0A0C4DH25 116 aa9.02□□□□□ -0.97
RPGR-203ENST00000378505 TRGV4A0A0C4DH28 118 aa9.02□□□□□ -0.97
RPGR-203ENST00000378505 PRSS46E5RG02 174 aa9.02□□□□□ -0.97
RPGR-203ENST00000378505 C8orf31Q8N9H6 132 aa9.02□□□□□ -0.97
RPGR-203ENST00000378505 MCRIP2Q9BUT9 160 aaKnown RBP9.02□□□□□ -0.97
RPGR-203ENST00000378505 CSTL1Q9H114 145 aa9.02□□□□□ -0.97
RPGR-203ENST00000378505 IGHV2-70P01814 119 aa9.02□□□□□ -0.97
RPGR-203ENST00000378505 WT1P19544 449 aaPredicted RBP9.02□□□□□ -0.97
RPGR-203ENST00000378505 SLAQ13239 276 aa9.02□□□□□ -0.97
RPGR-203ENST00000378505 FXYD5Q96DB9 178 aa9.02□□□□□ -0.97
RPGR-203ENST00000378505 LSM4Q9Y4Z0 139 aaKnown RBP9.02□□□□□ -0.97
RPGR-203ENST00000378505 TRBV7-9A0A0J9YWB2 115 aa9.01□□□□□ -0.97
RPGR-203ENST00000378505 TDGF1P13385 188 aa9.01□□□□□ -0.97
RPGR-203ENST00000378505 G3V318 75 aa9.01□□□□□ -0.97
RPGR-203ENST00000378505 EREGO14944 169 aa9.01□□□□□ -0.97
RPGR-203ENST00000378505 TDGF1P3P51864 188 aa9.01□□□□□ -0.97
RPGR-203ENST00000378505 PRR25Q96S07 402 aa9.01□□□□□ -0.97
RPGR-203ENST00000378505 KIF26AQ9ULI4 1882 aaPredicted RBP9.01□□□□□ -0.97
RPGR-203ENST00000378505 IGHV2-70DA0A0C4DH43 119 aa9.01□□□□□ -0.97
RPGR-203ENST00000378505 H3BRN7 92 aa9.01□□□□□ -0.97
RPGR-203ENST00000378505 MSMBP08118 114 aa9.01□□□□□ -0.97
RPGR-203ENST00000378505 Q6ZWC4 215 aa9.01□□□□□ -0.97
RPGR-203ENST00000378505 IGHV1-69DA0A0B4J2H0 117 aa9□□□□□ -0.97
RPGR-203ENST00000378505 A0A1B0GV72 72 aa9□□□□□ -0.97
RPGR-203ENST00000378505 IGHV1-69P01742 117 aa9□□□□□ -0.97
RPGR-203ENST00000378505 GATA3P23771 443 aa9□□□□□ -0.97
RPGR-203ENST00000378505 ZNF415Q09FC8 603 aa9□□□□□ -0.97
RPGR-203ENST00000378505 PLEKHB2Q96CS7 222 aa9□□□□□ -0.97
RPGR-203ENST00000378505 TMEM238C9JI98 176 aa9□□□□□ -0.97
RPGR-203ENST00000378505 CD5LO43866 347 aa9□□□□□ -0.97
RPGR-203ENST00000378505 LHBP01229 141 aa9□□□□□ -0.97
RPGR-203ENST00000378505 NAA38Q9BRA0 125 aaKnown RBP9□□□□□ -0.97
RPGR-203ENST00000378505 LURAP1LQ8IV03 231 aa9□□□□□ -0.97
RPGR-203ENST00000378505 LINC01356Q8N9X3 169 aa9□□□□□ -0.97
RPGR-203ENST00000378505 SPOCK3Q9BQ16 436 aa9□□□□□ -0.97
RPGR-203ENST00000378505 PLA2G2EQ9NZK7 142 aa9□□□□□ -0.97
RPGR-203ENST00000378505 DKK4Q9UBT3 224 aa9□□□□□ -0.97
RPGR-203ENST00000378505 EML6Q6ZMW3 1958 aa9□□□□□ -0.97
RPGR-203ENST00000378505 K7EM74 188 aa9□□□□□ -0.97
RPGR-203ENST00000378505 UBE2V1Q13404 147 aa9□□□□□ -0.97
RPGR-203ENST00000378505 GAGE13Q4V321 117 aa9□□□□□ -0.97
RPGR-203ENST00000378505 IL17RELQ6ZVW7 336 aa9□□□□□ -0.97
RPGR-203ENST00000378505 C8orf49Q96NF6 230 aa9□□□□□ -0.97
RPGR-203ENST00000378505 ERG28Q9UKR5 140 aa9□□□□□ -0.97
RPGR-203ENST00000378505 PRR14LQ5THK1 2151 aa8.99□□□□□ -0.97
RPGR-203ENST00000378505 IGLC7A0M8Q6 106 aa8.99□□□□□ -0.97
RPGR-203ENST00000378505 RUSC1-AS1Q66K80 236 aa8.99□□□□□ -0.97
RPGR-203ENST00000378505 CFAP161Q6P656 301 aa8.99□□□□□ -0.97
RPGR-203ENST00000378505 IGLC2P0DOY2 106 aa8.99□□□□□ -0.97
RPGR-203ENST00000378505 IGLC3P0DOY3 106 aa8.99□□□□□ -0.97
RPGR-203ENST00000378505 HTN3P15516 51 aa8.99□□□□□ -0.97
RPGR-203ENST00000378505 RPL36AP83881 106 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms