RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 OR5AL1P0C617 328 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 MAS1LP35410 378 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 UBE2E1P51965 193 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 C8orf46Q8TAG6 207 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 C14orf144Q96I85 54 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 PSG8Q9UQ74 426 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 TMEM213A2RRL7 107 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 KNCNA6PVL3 124 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 RPLP1P05386 114 aaKnown RBP6.36□□□□□ -1.39
CKAP2-203ENST00000378037 UNQ9165/PRO28630Q6UXU0 137 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 RBPMS2Q6ZRY4 209 aaKnown RBP6.36□□□□□ -1.39
CKAP2-203ENST00000378037 UBE2E2Q96LR5 201 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 GGACTQ9BVM4 153 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 TMEM238LA0A1B0GVL6 79 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 H3BVH4 76 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 GPX4P36969 197 aaPredicted RBP6.36□□□□□ -1.39
CKAP2-203ENST00000378037 PAFAH1B2P68402 229 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 GPR82Q96P67 336 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 MOB4Q9Y3A3 225 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 PRAC2D3DTV9 90 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 PRM2P04554 102 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 PRR20EP86478 221 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 PRR20CP86479 221 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 PRR20DP86480 221 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 PRR20BP86481 221 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 PRR20AP86496 221 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 Q6ZQT7 251 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 SMIM15Q7Z3B0 74 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 Q8N9W7 124 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 A8MWL6 223 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 TEX22C9J3V5 150 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 CKS2P33552 79 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 S100A7AQ86SG5 101 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 ZNF503Q96F45 646 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 TRAV26-2A0A0B4J265 109 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 TRAV12-3A0A0B4J271 114 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 B4DEV8 164 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 NUPR1O60356 82 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 PRSS1P07477 247 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 P0C879 139 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 TMEM249Q2WGJ8 235 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 ZNF491Q8N8L2 437 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 KLHL30-AS1Q8NEE0 82 aa6.35□□□□□ -1.39
CKAP2-203ENST00000378037 M0R1W7 72 aa6.34□□□□□ -1.39
CKAP2-203ENST00000378037 ARMS2P0C7Q2 107 aa6.34□□□□□ -1.39
CKAP2-203ENST00000378037 EIF4EBP1Q13541 118 aaPredicted RBP6.34□□□□□ -1.39
CKAP2-203ENST00000378037 KIR3DS1Q14943 382 aa6.34□□□□□ -1.39
CKAP2-203ENST00000378037 ATG101Q9BSB4 218 aa6.34□□□□□ -1.39
CKAP2-203ENST00000378037 RHPN1-AS1Q9BWJ2 59 aa6.34□□□□□ -1.39
CKAP2-203ENST00000378037 J3QKU1 62 aa6.34□□□□□ -1.39
CKAP2-203ENST00000378037 SCGB2A2Q13296 93 aa6.34□□□□□ -1.39
CKAP2-203ENST00000378037 PYY3Q5JQD4 70 aa6.34□□□□□ -1.39
CKAP2-203ENST00000378037 NEGR1Q7Z3B1 354 aa6.34□□□□□ -1.39
CKAP2-203ENST00000378037 C10orf105Q8TEF2 133 aa6.34□□□□□ -1.39
CKAP2-203ENST00000378037 C1orf159Q96HA4 380 aa6.34□□□□□ -1.39
CKAP2-203ENST00000378037 IL36BQ9NZH7 164 aa6.34□□□□□ -1.39
CKAP2-203ENST00000378037 SRSF1Q07955 248 aaKnown RBP eCLIP6.33□□□□□ -1.4
CKAP2-203ENST00000378037 ACTL10Q5JWF8 245 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 AMN1Q8IY45 258 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 NUP35Q8NFH5 326 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 FXYD5Q96DB9 178 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 NPFFR1Q9GZQ6 430 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 MSRB1Q9NZV6 116 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 KLK9Q9UKQ9 250 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 DMRT1Q9Y5R6 373 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 FBN1P35555 2871 aaKnown RBP6.33□□□□□ -1.4
CKAP2-203ENST00000378037 IGKV1D-37A0A075B6S9 117 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 IGHV3-53P01767 116 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 IGF1P05019 195 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 FAM106AQ4KMX7 169 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 OR10J6PQ8NGY7 276 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 TNFRSF14Q92956 283 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 GRAMD2BQ96HH9 432 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 MRPL32Q9BYC8 188 aaKnown RBP6.33□□□□□ -1.4
CKAP2-203ENST00000378037 TBL2Q9Y4P3 447 aaKnown RBP6.33□□□□□ -1.4
CKAP2-203ENST00000378037 KMT2BQ9UMN6 2715 aaPredicted RBP6.33□□□□□ -1.4
CKAP2-203ENST00000378037 A0A087WWL8 130 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 A0A087X0M5 115 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 A0A1B0GX30 115 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 PSMB11A5LHX3 300 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 DIRC3C9JPN6 131 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 SLAQ13239 276 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 SPINK13Q1W4C9 94 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 LINC00322Q6ZN03 302 aaPredicted RBP6.33□□□□□ -1.4
CKAP2-203ENST00000378037 C18orf65Q6ZTR6 163 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 FANCD2OSQ96PS1 177 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 HIST1H2BLQ99880 126 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 VAMP8Q9BV40 100 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 PHLDA3Q9Y5J5 127 aa6.33□□□□□ -1.4
CKAP2-203ENST00000378037 TCAPO15273 167 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 SMIM17P0DL12 118 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 ZNF256Q9Y2P7 627 aaPredicted RBP6.32□□□□□ -1.4
CKAP2-203ENST00000378037 TENM4Q6N022 2769 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.32□□□□□ -1.4
CKAP2-203ENST00000378037 A0A1W2PRE2 83 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 CTSGP08311 255 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 CD7P09564 240 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 GATA1P15976 413 aaPredicted RBP6.32□□□□□ -1.4
CKAP2-203ENST00000378037 RPL35AP18077 110 aaKnown RBP6.32□□□□□ -1.4
CKAP2-203ENST00000378037 CDX1P47902 265 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms