RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 CEACAM8P31997 349 aaPredicted RBP7□□□□□ -1.29
PCDH9-202ENST00000377865 ADAMTS9Q9P2N4 1935 aa6.99□□□□□ -1.29
PCDH9-202ENST00000377865 NPYP01303 97 aa6.99□□□□□ -1.29
PCDH9-202ENST00000377865 GAGE2BQ13066 116 aa6.99□□□□□ -1.29
PCDH9-202ENST00000377865 GAGE2EQ4V326 116 aa6.99□□□□□ -1.29
PCDH9-202ENST00000377865 GAGE2DQ9UEU5 116 aa6.99□□□□□ -1.29
PCDH9-202ENST00000377865 TSSC4Q9Y5U2 329 aaPredicted RBP6.99□□□□□ -1.29
PCDH9-202ENST00000377865 SPINK8P0C7L1 97 aa6.99□□□□□ -1.29
PCDH9-202ENST00000377865 PRB3Q04118 309 aaPredicted RBP6.99□□□□□ -1.29
PCDH9-202ENST00000377865 A0A0G2JNJ9 132 aa6.99□□□□□ -1.29
PCDH9-202ENST00000377865 LOXP28300 417 aaPredicted RBP6.99□□□□□ -1.29
PCDH9-202ENST00000377865 FAM110DQ8TAY7 271 aaPredicted RBP6.99□□□□□ -1.29
PCDH9-202ENST00000377865 Q9UFV3 132 aa6.99□□□□□ -1.29
PCDH9-202ENST00000377865 MOB4Q9Y3A3 225 aa6.99□□□□□ -1.29
PCDH9-202ENST00000377865 RP1P56715 2156 aa6.99□□□□□ -1.29
PCDH9-202ENST00000377865 CNTFRP26992 372 aa6.99□□□□□ -1.29
PCDH9-202ENST00000377865 SLC25A16P16260 332 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 KLRB1Q12918 225 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 LY6EQ16553 131 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 ABHD17AQ96GS6 310 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 ATP6V0BQ99437 205 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 TRAV41A0A0B4J266 112 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 Q6ZVH6 145 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 PPDPFLQ8WWR9 84 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 KAAG1Q9UBP8 84 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 COL5A1P20908 1838 aaPredicted RBP6.98□□□□□ -1.29
PCDH9-202ENST00000377865 GAGE12HA6NDE8 117 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 K7EMI3 77 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 DNAL4O96015 105 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 ERCC8Q13216 396 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 Q6ZS92 163 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 TPSG1Q9NRR2 321 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 HLA-DRB4P13762 266 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 PATE2Q6UY27 113 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 HIGD1BQ9P298 99 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 HLA-DRB4X5D2U9 266 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 A0A087WX48 190 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 RBAKDNA6NC62 111 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 CTRLP40313 264 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 PRSS57Q6UWY2 283 aa6.98□□□□□ -1.29
PCDH9-202ENST00000377865 A0A1B0GXF2 115 aa6.97□□□□□ -1.29
PCDH9-202ENST00000377865 LYNX1G3V0Z9 82 aa6.97□□□□□ -1.29
PCDH9-202ENST00000377865 LYNX1P0DP58 116 aa6.97□□□□□ -1.29
PCDH9-202ENST00000377865 CD28P10747 220 aa6.97□□□□□ -1.29
PCDH9-202ENST00000377865 VGLL1Q99990 258 aa6.97□□□□□ -1.29
PCDH9-202ENST00000377865 NPFFR1Q9GZQ6 430 aa6.97□□□□□ -1.29
PCDH9-202ENST00000377865 CABIN1Q9Y6J0 2220 aa6.97□□□□□ -1.29
PCDH9-202ENST00000377865 LRP4O75096 1905 aa6.97□□□□□ -1.29
PCDH9-202ENST00000377865 SUMO2P61956 95 aaKnown RBP6.97□□□□□ -1.29
PCDH9-202ENST00000377865 ASPHD1Q5U4P2 390 aa6.97□□□□□ -1.29
PCDH9-202ENST00000377865 SFTA2Q6UW10 78 aa6.97□□□□□ -1.29
PCDH9-202ENST00000377865 TMEM101Q96IK0 257 aa6.97□□□□□ -1.29
PCDH9-202ENST00000377865 M0R2P5 195 aa6.97□□□□□ -1.29
PCDH9-202ENST00000377865 KLRD1Q13241 179 aa6.97□□□□□ -1.29
PCDH9-202ENST00000377865 C2orf70A6NJV1 201 aa6.96□□□□□ -1.29
PCDH9-202ENST00000377865 IGLV2-8P01709 118 aa6.96□□□□□ -1.29
PCDH9-202ENST00000377865 PRTN3P24158 256 aa6.96□□□□□ -1.29
PCDH9-202ENST00000377865 FAM120AOSQ5T036 256 aa6.96□□□□□ -1.29
PCDH9-202ENST00000377865 GTSF1Q8WW33 167 aa6.96□□□□□ -1.29
PCDH9-202ENST00000377865 DOCK11Q5JSL3 2073 aa6.96□□□□□ -1.29
PCDH9-202ENST00000377865 F8VRH5 84 aa6.96□□□□□ -1.29
PCDH9-202ENST00000377865 CRXO43186 299 aaPredicted RBP6.96□□□□□ -1.29
PCDH9-202ENST00000377865 IL17RELQ6ZVW7 336 aa6.96□□□□□ -1.29
PCDH9-202ENST00000377865 MRPL53Q96EL3 112 aaKnown RBP6.96□□□□□ -1.29
PCDH9-202ENST00000377865 C20orf78Q9BR46 151 aa6.96□□□□□ -1.29
PCDH9-202ENST00000377865 LINC00173Q6ZV60 143 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 ZNF491Q8N8L2 437 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 SPANXDQ9BXN6 97 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 DKK2Q9UBU2 259 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 TP53TG3Q9ULZ0 132 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 C19orf71A6NCJ1 209 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 C22orf46C9J442 243 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 MORN5Q5VZ52 161 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 IGFL3Q6UXB1 125 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 SPATA12Q7Z6I5 190 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 AZU1P20160 251 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 C12orf74Q32Q52 190 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 NEGR1Q7Z3B1 354 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 DTX2Q86UW9 622 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 ZNF503Q96F45 646 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 DUX3Q96PT4 197 aa6.96□□□□□ -1.3
PCDH9-202ENST00000377865 ATG2AQ2TAZ0 1938 aa6.95□□□□□ -1.3
PCDH9-202ENST00000377865 CPAMD8Q8IZJ3 1885 aa6.95□□□□□ -1.3
PCDH9-202ENST00000377865 PRB4P10163 310 aaPredicted RBP6.95□□□□□ -1.3
PCDH9-202ENST00000377865 USMG5Q96IX5 58 aa6.95□□□□□ -1.3
PCDH9-202ENST00000377865 E7EQL1 145 aa6.95□□□□□ -1.3
PCDH9-202ENST00000377865 BRWD1-AS2P59051 145 aa6.95□□□□□ -1.3
PCDH9-202ENST00000377865 IGFL4Q6B9Z1 124 aa6.95□□□□□ -1.3
PCDH9-202ENST00000377865 MRPL35Q9NZE8 188 aaKnown RBP6.95□□□□□ -1.3
PCDH9-202ENST00000377865 SRSF2Q01130 221 aaKnown RBP6.95□□□□□ -1.3
PCDH9-202ENST00000377865 SRSF6Q13247 344 aaKnown RBP6.95□□□□□ -1.3
PCDH9-202ENST00000377865 C2orf66Q6UXQ4 117 aa6.95□□□□□ -1.3
PCDH9-202ENST00000377865 C14orf178Q8N769 122 aaPredicted RBP6.95□□□□□ -1.3
PCDH9-202ENST00000377865 GLMPQ8WWB7 406 aa6.95□□□□□ -1.3
PCDH9-202ENST00000377865 SMIM2Q9BVW6 85 aa6.95□□□□□ -1.3
PCDH9-202ENST00000377865 TNRC6AQ8NDV7 1962 aaKnown RBP6.95□□□□□ -1.3
PCDH9-202ENST00000377865 FRMD6-AS1P0C7T7 363 aa6.95□□□□□ -1.3
PCDH9-202ENST00000377865 PMVKQ15126 192 aa6.95□□□□□ -1.3
PCDH9-202ENST00000377865 C10orf142B7Z368 130 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 IGKV3-20P01619 116 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms