RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CXCL1P09341 107 aa10.92□□□□□ -0.66
GPC6-201ENST00000377047 C8orf49Q96NF6 230 aa10.92□□□□□ -0.66
GPC6-201ENST00000377047 LIME1Q9H400 295 aa10.92□□□□□ -0.66
GPC6-201ENST00000377047 AZU1P20160 251 aa10.92□□□□□ -0.66
GPC6-201ENST00000377047 KIAA2026Q5HYC2 2103 aa10.92□□□□□ -0.66
GPC6-201ENST00000377047 LINC00479Q96M42 142 aa10.92□□□□□ -0.66
GPC6-201ENST00000377047 GAGE12BA1L429 117 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 GAGE7O76087 117 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 GAGE12FP0CL80 117 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 GAGE12GP0CL81 117 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 GAGE12IP0CL82 117 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 RASL11AQ6T310 242 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 MRAPQ8TCY5 172 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 TPSG1Q9NRR2 321 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 DEFB113Q30KQ7 82 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 NLRC5Q86WI3 1866 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 AMN1Q8IY45 258 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 TMEM158Q8WZ71 300 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 ZNF524Q96C55 264 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 SPTBN1Q01082 2364 aaKnown RBP10.91□□□□□ -0.66
GPC6-201ENST00000377047 TRAV8-2A0A0B4J237 113 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 SHISA9B4DS77 424 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 SLX1AQ9BQ83 275 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 HELZP42694 1942 aaKnown RBP10.91□□□□□ -0.66
GPC6-201ENST00000377047 NDUFA4O00483 81 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 CDK2AP2O75956 126 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 PAX9P55771 341 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 TMEM242Q9NWH2 141 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 LAMTOR2Q9Y2Q5 125 aa10.91□□□□□ -0.66
GPC6-201ENST00000377047 TRAV12-2A0A075B6T6 113 aa10.9□□□□□ -0.66
GPC6-201ENST00000377047 DEFB112Q30KQ8 113 aa10.9□□□□□ -0.66
GPC6-201ENST00000377047 TRPT1Q86TN4 253 aaKnown RBP10.9□□□□□ -0.66
GPC6-201ENST00000377047 FNDC4Q9H6D8 234 aaPredicted RBP10.9□□□□□ -0.66
GPC6-201ENST00000377047 DIAPH2-AS1Q14236 149 aa10.9□□□□□ -0.66
GPC6-201ENST00000377047 FAM90A2PQ658T7 463 aa10.9□□□□□ -0.66
GPC6-201ENST00000377047 C8orf86Q6ZUL3 223 aa10.9□□□□□ -0.66
GPC6-201ENST00000377047 IGHV2-5P01817 119 aa10.9□□□□□ -0.66
GPC6-201ENST00000377047 A0A1B0GW64 132 aa10.9□□□□□ -0.66
GPC6-201ENST00000377047 HOXB4P17483 251 aaPredicted RBP10.9□□□□□ -0.66
GPC6-201ENST00000377047 LINC01559Q495D7 138 aa10.9□□□□□ -0.66
GPC6-201ENST00000377047 ERG28Q9UKR5 140 aa10.9□□□□□ -0.66
GPC6-201ENST00000377047 TMEM75Q8N9X5 138 aa10.9□□□□□ -0.66
GPC6-201ENST00000377047 MMP23AO75900 390 aa10.9□□□□□ -0.67
GPC6-201ENST00000377047 NCOR1P1Q9H4R4 102 aa10.9□□□□□ -0.67
GPC6-201ENST00000377047 ZMAT4Q9H898 229 aa10.9□□□□□ -0.67
GPC6-201ENST00000377047 DOCK7Q96N67 2140 aa10.89□□□□□ -0.67
GPC6-201ENST00000377047 INS-IGF2F8WCM5 200 aa10.89□□□□□ -0.67
GPC6-201ENST00000377047 LINC00311Q8N616 119 aa10.89□□□□□ -0.67
GPC6-201ENST00000377047 LY96Q9Y6Y9 160 aa10.89□□□□□ -0.67
GPC6-201ENST00000377047 IGHV4-59P01825 116 aa10.89□□□□□ -0.67
GPC6-201ENST00000377047 SPXQ9BT56 116 aa10.89□□□□□ -0.67
GPC6-201ENST00000377047 ORAOV1Q8WV07 137 aa10.89□□□□□ -0.67
GPC6-201ENST00000377047 GPR179Q6PRD1 2367 aa10.88□□□□□ -0.67
GPC6-201ENST00000377047 ZNF561-AS1K7EIQ3 104 aa10.88□□□□□ -0.67
GPC6-201ENST00000377047 F8WEM9 126 aa10.88□□□□□ -0.67
GPC6-201ENST00000377047 TRBV24-1A0A075B6N3 115 aa10.88□□□□□ -0.67
GPC6-201ENST00000377047 IGHV1OR15-1A0A075B7D0 117 aa10.88□□□□□ -0.67
GPC6-201ENST00000377047 VPREB3Q9UKI3 123 aa10.88□□□□□ -0.67
GPC6-201ENST00000377047 PLXNA2O75051 1894 aa10.88□□□□□ -0.67
GPC6-201ENST00000377047 TRBV25-1A0A075B6N4 114 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 PFN1P07737 140 aaKnown RBP10.87□□□□□ -0.67
GPC6-201ENST00000377047 C15orf65H3BRN8 121 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 RHODO00212 210 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 TIMM21Q9BVV7 248 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 LAMTOR3Q9UHA4 124 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 TSSC4Q9Y5U2 329 aaPredicted RBP10.87□□□□□ -0.67
GPC6-201ENST00000377047 USF3Q68DE3 2245 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 ELANEP08246 267 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 ATXN8Q156A1 80 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 C1orf194Q5T5A4 169 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 PRIMA1Q86XR5 153 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 MYLKQ15746 1914 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 PLXND1Q9Y4D7 1925 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 CGB3P0DN86 165 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 GSN-AS1Q9NRJ2 163 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 ABCA4P78363 2273 aa10.87□□□□□ -0.67
GPC6-201ENST00000377047 C22orf46C9J442 243 aa10.86□□□□□ -0.67
GPC6-201ENST00000377047 ZNF407Q9C0G0 2248 aa10.86□□□□□ -0.67
GPC6-201ENST00000377047 LEPROTO15243 131 aa10.86□□□□□ -0.67
GPC6-201ENST00000377047 CDKN1BP46527 198 aa10.86□□□□□ -0.67
GPC6-201ENST00000377047 LY6G5BQ8NDX9 201 aa10.86□□□□□ -0.67
GPC6-201ENST00000377047 MRPL27Q9P0M9 148 aaKnown RBP10.86□□□□□ -0.67
GPC6-201ENST00000377047 ANAPC1Q9H1A4 1944 aa10.86□□□□□ -0.67
GPC6-201ENST00000377047 TRBV19A0A075B6N1 114 aa10.86□□□□□ -0.67
GPC6-201ENST00000377047 MYMXA0A1B0GTQ4 84 aa10.86□□□□□ -0.67
GPC6-201ENST00000377047 IGHV2-70P01814 119 aa10.86□□□□□ -0.67
GPC6-201ENST00000377047 ZNF134P52741 427 aa10.86□□□□□ -0.67
GPC6-201ENST00000377047 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.86□□□□□ -0.67
GPC6-201ENST00000377047 HSD52Q0P140 79 aa10.86□□□□□ -0.67
GPC6-201ENST00000377047 TMEM213A2RRL7 107 aa10.85□□□□□ -0.67
GPC6-201ENST00000377047 TNFRSF6BO95407 300 aa10.85□□□□□ -0.67
GPC6-201ENST00000377047 A0A096LPF7 62 aa10.85□□□□□ -0.67
GPC6-201ENST00000377047 LYL1P12980 280 aa10.85□□□□□ -0.67
GPC6-201ENST00000377047 HIST1H2BLQ99880 126 aa10.85□□□□□ -0.67
GPC6-201ENST00000377047 IGHV4-30-2A0A087WSY4 118 aa10.85□□□□□ -0.67
GPC6-201ENST00000377047 IGHV7-4-1A0A0J9YVY3 117 aa10.85□□□□□ -0.67
GPC6-201ENST00000377047 EREGO14944 169 aa10.85□□□□□ -0.67
GPC6-201ENST00000377047 ZNF479Q96JC4 524 aa10.85□□□□□ -0.67
GPC6-201ENST00000377047 IGHV3-38A0A0C4DH36 116 aa10.84□□□□□ -0.67
GPC6-201ENST00000377047 WT1-ASQ06250 92 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms