RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 TMEM30BQ3MIR4 351 aa12.42□□□□□ -0.42
SSH3-203ENST00000376757 TMEM97Q5BJF2 176 aa12.42□□□□□ -0.42
SSH3-203ENST00000376757 RNF125Q96EQ8 232 aa12.42□□□□□ -0.42
SSH3-203ENST00000376757 CT45A10P0DMU9 189 aa12.42□□□□□ -0.42
SSH3-203ENST00000376757 EVI2AP22794 236 aa12.42□□□□□ -0.42
SSH3-203ENST00000376757 DKK2Q9UBU2 259 aa12.42□□□□□ -0.42
SSH3-203ENST00000376757 SOX21Q9Y651 276 aaPredicted RBP12.42□□□□□ -0.42
SSH3-203ENST00000376757 GAGE10A6NGK3 116 aa12.41□□□□□ -0.42
SSH3-203ENST00000376757 TWIST1Q15672 202 aa12.41□□□□□ -0.42
SSH3-203ENST00000376757 PSG3Q16557 428 aa12.41□□□□□ -0.42
SSH3-203ENST00000376757 Q6ZS92 163 aa12.41□□□□□ -0.42
SSH3-203ENST00000376757 ZNF491Q8N8L2 437 aa12.41□□□□□ -0.42
SSH3-203ENST00000376757 FAM57AQ8TBR7 257 aa12.41□□□□□ -0.42
SSH3-203ENST00000376757 SCNM1Q9BWG6 230 aa12.41□□□□□ -0.42
SSH3-203ENST00000376757 IGHV3-66A0A0C4DH42 116 aa12.41□□□□□ -0.42
SSH3-203ENST00000376757 TMEM11P17152 192 aa12.41□□□□□ -0.42
SSH3-203ENST00000376757 LINC00311Q8N616 119 aa12.41□□□□□ -0.42
SSH3-203ENST00000376757 MEGF9Q9H1U4 602 aa12.41□□□□□ -0.42
SSH3-203ENST00000376757 NCOR2Q9Y618 2525 aa12.41□□□□□ -0.42
SSH3-203ENST00000376757 C1RLQ9NZP8 487 aa12.4□□□□□ -0.42
SSH3-203ENST00000376757 CHD8Q9HCK8 2581 aa12.4□□□□□ -0.42
SSH3-203ENST00000376757 CD5LO43866 347 aa12.4□□□□□ -0.42
SSH3-203ENST00000376757 GNG7O60262 68 aa12.4□□□□□ -0.42
SSH3-203ENST00000376757 SH2D1AO60880 128 aa12.4□□□□□ -0.42
SSH3-203ENST00000376757 NPYP01303 97 aa12.4□□□□□ -0.42
SSH3-203ENST00000376757 CRYGBP07316 175 aa12.4□□□□□ -0.42
SSH3-203ENST00000376757 GATA1P15976 413 aaPredicted RBP12.4□□□□□ -0.42
SSH3-203ENST00000376757 SMIM12Q96EX1 92 aa12.4□□□□□ -0.42
SSH3-203ENST00000376757 PPIAL4CA0A0B4J2A2 164 aa12.39□□□□□ -0.43
SSH3-203ENST00000376757 TMEM189A5PLL7 270 aa12.39□□□□□ -0.43
SSH3-203ENST00000376757 FBLL1A6NHQ2 334 aaKnown RBP12.39□□□□□ -0.43
SSH3-203ENST00000376757 IGLV1-47P01700 117 aa12.39□□□□□ -0.43
SSH3-203ENST00000376757 PPIAL4GP0DN37 164 aa12.39□□□□□ -0.43
SSH3-203ENST00000376757 LINC01560Q8TB33 94 aa12.39□□□□□ -0.43
SSH3-203ENST00000376757 SHANK2-AS3Q9BTD1 123 aa12.39□□□□□ -0.43
SSH3-203ENST00000376757 PRRG2O14669 202 aa12.39□□□□□ -0.43
SSH3-203ENST00000376757 ZNF80P51504 273 aaPredicted RBP12.39□□□□□ -0.43
SSH3-203ENST00000376757 MRPL51Q4U2R6 128 aaKnown RBP12.39□□□□□ -0.43
SSH3-203ENST00000376757 FAM71F2Q6NXP2 309 aa12.39□□□□□ -0.43
SSH3-203ENST00000376757 ZNF414Q96IQ9 312 aa12.39□□□□□ -0.43
SSH3-203ENST00000376757 AP1S3Q96PC3 154 aa12.39□□□□□ -0.43
SSH3-203ENST00000376757 TNFRSF13BO14836 293 aaPredicted RBP12.39□□□□□ -0.43
SSH3-203ENST00000376757 CKS2P33552 79 aa12.39□□□□□ -0.43
SSH3-203ENST00000376757 VGLL1Q99990 258 aa12.39□□□□□ -0.43
SSH3-203ENST00000376757 IGHV3-49A0A0A0MS15 119 aa12.38□□□□□ -0.43
SSH3-203ENST00000376757 PIP4P1Q86T03 277 aa12.38□□□□□ -0.43
SSH3-203ENST00000376757 PEF1Q9UBV8 284 aaKnown RBP12.38□□□□□ -0.43
SSH3-203ENST00000376757 NCBP2LA6PVI3 153 aaKnown RBP12.38□□□□□ -0.43
SSH3-203ENST00000376757 K7EQM0 130 aa12.38□□□□□ -0.43
SSH3-203ENST00000376757 FGF6P10767 208 aa12.38□□□□□ -0.43
SSH3-203ENST00000376757 EGR2P11161 476 aaPredicted RBP12.38□□□□□ -0.43
SSH3-203ENST00000376757 PLP1P60201 277 aa12.38□□□□□ -0.43
SSH3-203ENST00000376757 GFRALQ6UXV0 394 aa12.38□□□□□ -0.43
SSH3-203ENST00000376757 ABHD17AQ96GS6 310 aa12.38□□□□□ -0.43
SSH3-203ENST00000376757 CEACAM4O75871 244 aa12.37□□□□□ -0.43
SSH3-203ENST00000376757 ORM1P02763 201 aa12.37□□□□□ -0.43
SSH3-203ENST00000376757 GRNP28799 593 aaKnown RBP12.37□□□□□ -0.43
SSH3-203ENST00000376757 RBPJQ06330 500 aa12.37□□□□□ -0.43
SSH3-203ENST00000376757 KIR3DS1Q14943 382 aa12.37□□□□□ -0.43
SSH3-203ENST00000376757 H3BRN7 92 aa12.37□□□□□ -0.43
SSH3-203ENST00000376757 MS4A6AQ9H2W1 248 aa12.37□□□□□ -0.43
SSH3-203ENST00000376757 AGRNO00468 2067 aa12.37□□□□□ -0.43
SSH3-203ENST00000376757 SHISA9B4DS77 424 aa12.36□□□□□ -0.43
SSH3-203ENST00000376757 K7ERJ3 54 aa12.36□□□□□ -0.43
SSH3-203ENST00000376757 ERCC8Q13216 396 aa12.36□□□□□ -0.43
SSH3-203ENST00000376757 ZNF207O43670 478 aaKnown RBP12.36□□□□□ -0.43
SSH3-203ENST00000376757 ORMDL3Q8N138 153 aa12.36□□□□□ -0.43
SSH3-203ENST00000376757 AAMDCQ9H7C9 122 aa12.36□□□□□ -0.43
SSH3-203ENST00000376757 SPRY2O43597 315 aa12.36□□□□□ -0.43
SSH3-203ENST00000376757 FAM104BQ5XKR9 115 aa12.36□□□□□ -0.43
SSH3-203ENST00000376757 TMEM14CQ9P0S9 112 aa12.35□□□□□ -0.43
SSH3-203ENST00000376757 IGKV2D-26A0A0A0MRZ7 120 aa12.35□□□□□ -0.43
SSH3-203ENST00000376757 HOXB4P17483 251 aaPredicted RBP12.35□□□□□ -0.43
SSH3-203ENST00000376757 NDPQ00604 133 aa12.35□□□□□ -0.43
SSH3-203ENST00000376757 C3orf36Q3SXR2 165 aa12.35□□□□□ -0.43
SSH3-203ENST00000376757 RNF182Q8N6D2 247 aa12.35□□□□□ -0.43
SSH3-203ENST00000376757 CRYBG3Q68DQ2 2970 aa12.34□□□□□ -0.43
SSH3-203ENST00000376757 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.34□□□□□ -0.431e-6■■■■□ 21.1
SSH3-203ENST00000376757 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.34□□□□□ -0.43
SSH3-203ENST00000376757 GCSHP23434 173 aa12.34□□□□□ -0.43
SSH3-203ENST00000376757 C16orf54Q6UWD8 224 aa12.34□□□□□ -0.43
SSH3-203ENST00000376757 Q6ZQT7 251 aa12.34□□□□□ -0.43
SSH3-203ENST00000376757 IFI27L1Q96BM0 104 aa12.34□□□□□ -0.43
SSH3-203ENST00000376757 A1L4Q6 167 aa12.34□□□□□ -0.43
SSH3-203ENST00000376757 APOBEC3AP31941 199 aaPredicted RBP12.34□□□□□ -0.43
SSH3-203ENST00000376757 ASCL5Q7RTU5 278 aa12.34□□□□□ -0.43
SSH3-203ENST00000376757 SPTBN4Q9H254 2564 aa12.33□□□□□ -0.44
SSH3-203ENST00000376757 CREBBPQ92793 2442 aa12.33□□□□□ -0.44
SSH3-203ENST00000376757 A0A0G2JLM5 398 aa12.33□□□□□ -0.44
SSH3-203ENST00000376757 J3KRW8 73 aa12.33□□□□□ -0.44
SSH3-203ENST00000376757 GOSR1O95249 250 aa12.33□□□□□ -0.44
SSH3-203ENST00000376757 PRAC2D3DTV9 90 aa12.33□□□□□ -0.44
SSH3-203ENST00000376757 MRPS12O15235 138 aaKnown RBP12.33□□□□□ -0.44
SSH3-203ENST00000376757 HBDP02042 147 aa12.33□□□□□ -0.44
SSH3-203ENST00000376757 PVRIGQ6DKI7 326 aa12.33□□□□□ -0.44
SSH3-203ENST00000376757 DEFB104AQ8WTQ1 72 aa12.33□□□□□ -0.44
SSH3-203ENST00000376757 FAM90A27PA6NNH2 459 aa12.32□□□□□ -0.44
SSH3-203ENST00000376757 NDUFS7O75251 213 aa12.32□□□□□ -0.44
SSH3-203ENST00000376757 FER1L6-AS1Q8NA97 138 aa12.32□□□□□ -0.44
SSH3-203ENST00000376757 TRAV26-2A0A0B4J265 109 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms