RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 PMCHP20382 165 aa16.75■□□□□ 0.27
RNF39-202ENST00000376751 DDTP30046 118 aa16.75■□□□□ 0.27
RNF39-202ENST00000376751 KLF5Q13887 457 aaPredicted RBP16.75■□□□□ 0.27
RNF39-202ENST00000376751 SIGLECL1Q8N7X8 197 aa16.75■□□□□ 0.27
RNF39-202ENST00000376751 HIF1ANQ9NWT6 349 aa16.75■□□□□ 0.27
RNF39-202ENST00000376751 POLQO75417 2590 aa16.74■□□□□ 0.27
RNF39-202ENST00000376751 IGHV3OR16-13A0A075B7E8 117 aa16.74■□□□□ 0.27
RNF39-202ENST00000376751 IGHV3-74A0A0B4J1X5 117 aa16.74■□□□□ 0.27
RNF39-202ENST00000376751 SERTM2A0A1B0GWG4 89 aa16.74■□□□□ 0.27
RNF39-202ENST00000376751 A8MWP6 167 aa16.74■□□□□ 0.27
RNF39-202ENST00000376751 ZNF207O43670 478 aaKnown RBP16.74■□□□□ 0.27
RNF39-202ENST00000376751 VGLL1Q99990 258 aa16.74■□□□□ 0.27
RNF39-202ENST00000376751 A0A087X0K7 114 aa16.73■□□□□ 0.27
RNF39-202ENST00000376751 AMTP48728 403 aa16.73■□□□□ 0.27
RNF39-202ENST00000376751 SRSF1Q07955 248 aaKnown RBP eCLIP16.73■□□□□ 0.27
RNF39-202ENST00000376751 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.73■□□□□ 0.27
RNF39-202ENST00000376751 Q8TAT8 98 aa16.73■□□□□ 0.27
RNF39-202ENST00000376751 CSPG4Q6UVK1 2322 aa16.73■□□□□ 0.27
RNF39-202ENST00000376751 ZNF324O75467 553 aaPredicted RBP16.73■□□□□ 0.27
RNF39-202ENST00000376751 FOXA3P55318 350 aaPredicted RBP16.73■□□□□ 0.27
RNF39-202ENST00000376751 FAM209BQ5JX69 171 aa16.73■□□□□ 0.27
RNF39-202ENST00000376751 CENPEQ02224 2701 aa16.72■□□□□ 0.27
RNF39-202ENST00000376751 IGHV3-49A0A0A0MS15 119 aa16.72■□□□□ 0.27
RNF39-202ENST00000376751 FAM19A2Q8N3H0 131 aa16.72■□□□□ 0.27
RNF39-202ENST00000376751 ARL6IP6Q8N6S5 226 aa16.72■□□□□ 0.27
RNF39-202ENST00000376751 NRN1Q9NPD7 142 aa16.72■□□□□ 0.27
RNF39-202ENST00000376751 USP9YO00507 2555 aaPredicted RBP16.72■□□□□ 0.27
RNF39-202ENST00000376751 FAM223BA6NKX1 122 aa16.71■□□□□ 0.27
RNF39-202ENST00000376751 B4DSR2 109 aa16.71■□□□□ 0.27
RNF39-202ENST00000376751 HAX1O00165 279 aa16.71■□□□□ 0.27
RNF39-202ENST00000376751 TRGV3P03979 118 aa16.71■□□□□ 0.27
RNF39-202ENST00000376751 S100A7P31151 101 aa16.71■□□□□ 0.27
RNF39-202ENST00000376751 NIT1Q86X76 327 aa16.71■□□□□ 0.27
RNF39-202ENST00000376751 FAM223AQ8IWN6 122 aa16.71■□□□□ 0.27
RNF39-202ENST00000376751 SH2D1AO60880 128 aa16.71■□□□□ 0.27
RNF39-202ENST00000376751 IGF1P05019 195 aa16.71■□□□□ 0.27
RNF39-202ENST00000376751 ARMS2P0C7Q2 107 aa16.71■□□□□ 0.27
RNF39-202ENST00000376751 ZNF705DP0CH99 300 aaPredicted RBP16.71■□□□□ 0.27
RNF39-202ENST00000376751 ZNF705BP0CI00 300 aaPredicted RBP16.71■□□□□ 0.27
RNF39-202ENST00000376751 RELQ04864 619 aaPredicted RBP16.71■□□□□ 0.27
RNF39-202ENST00000376751 PRR25Q96S07 402 aa16.71■□□□□ 0.27
RNF39-202ENST00000376751 PRAC2D3DTV9 90 aa16.7■□□□□ 0.26
RNF39-202ENST00000376751 CT45A10P0DMU9 189 aa16.7■□□□□ 0.26
RNF39-202ENST00000376751 DEFA6Q01524 100 aa16.7■□□□□ 0.26
RNF39-202ENST00000376751 LCN12Q6JVE5 192 aa16.7■□□□□ 0.26
RNF39-202ENST00000376751 Q6ZS46 218 aa16.7■□□□□ 0.26
RNF39-202ENST00000376751 COX8CQ7Z4L0 72 aa16.7■□□□□ 0.26
RNF39-202ENST00000376751 ZNF843Q8N446 348 aa16.7■□□□□ 0.26
RNF39-202ENST00000376751 RNF182Q8N6D2 247 aa16.7■□□□□ 0.26
RNF39-202ENST00000376751 IGHG2P01859 326 aa16.69■□□□□ 0.26
RNF39-202ENST00000376751 RAB9AP51151 201 aa16.69■□□□□ 0.26
RNF39-202ENST00000376751 DSCR9P59020 149 aa16.69■□□□□ 0.26
RNF39-202ENST00000376751 Q8N976 141 aa16.69■□□□□ 0.26
RNF39-202ENST00000376751 C14orf144Q96I85 54 aa16.69■□□□□ 0.26
RNF39-202ENST00000376751 U3KQE9 123 aa16.69■□□□□ 0.26
RNF39-202ENST00000376751 CSMD2Q7Z408 3487 aa16.69■□□□□ 0.26
RNF39-202ENST00000376751 A0A096LNT2 108 aa16.69■□□□□ 0.26
RNF39-202ENST00000376751 TRBV12-3P01733 135 aa16.69■□□□□ 0.26
RNF39-202ENST00000376751 URB1-AS1Q96HZ7 61 aa16.69■□□□□ 0.26
RNF39-202ENST00000376751 A0A1B0GUT8 65 aa16.68■□□□□ 0.26
RNF39-202ENST00000376751 A1L4Q6 167 aa16.68■□□□□ 0.26
RNF39-202ENST00000376751 ZNF80P51504 273 aaPredicted RBP16.68■□□□□ 0.26
RNF39-202ENST00000376751 BLCAPP62952 87 aa16.68■□□□□ 0.26
RNF39-202ENST00000376751 METTL26Q96S19 204 aa16.68■□□□□ 0.26
RNF39-202ENST00000376751 TMSB15BA0A087X1C1 80 aa16.68■□□□□ 0.26
RNF39-202ENST00000376751 LOC102724200A0A096LPH7 203 aaPredicted RBP16.68■□□□□ 0.26
RNF39-202ENST00000376751 NTF3P20783 257 aa16.68■□□□□ 0.26
RNF39-202ENST00000376751 PPIFP30405 207 aaKnown RBP16.68■□□□□ 0.26
RNF39-202ENST00000376751 KRTDAPP60985 99 aa16.68■□□□□ 0.26
RNF39-202ENST00000376751 ERCC8Q13216 396 aa16.68■□□□□ 0.26
RNF39-202ENST00000376751 FAM162BQ5T6X4 162 aa16.68■□□□□ 0.26
RNF39-202ENST00000376751 TEX43Q6ZNM6 134 aa16.68■□□□□ 0.26
RNF39-202ENST00000376751 EPG5Q9HCE0 2579 aa16.67■□□□□ 0.26
RNF39-202ENST00000376751 ZANQ9Y493 2812 aa16.67■□□□□ 0.26
RNF39-202ENST00000376751 COX6B1P14854 86 aa16.67■□□□□ 0.26
RNF39-202ENST00000376751 TDRG1Q3Y452 100 aa16.67■□□□□ 0.26
RNF39-202ENST00000376751 SAPCD1Q5SSQ6 148 aa16.67■□□□□ 0.26
RNF39-202ENST00000376751 C1orf194Q5T5A4 169 aa16.67■□□□□ 0.26
RNF39-202ENST00000376751 ATP6V0BQ99437 205 aa16.67■□□□□ 0.26
RNF39-202ENST00000376751 TRAV8-2A0A0B4J237 113 aa16.66■□□□□ 0.26
RNF39-202ENST00000376751 KIR2DL5BA0A0G2JN68 375 aa16.66■□□□□ 0.26
RNF39-202ENST00000376751 KIR2DL5BA0A0G2JPC4 375 aa16.66■□□□□ 0.26
RNF39-202ENST00000376751 M0QZ24 198 aa16.66■□□□□ 0.26
RNF39-202ENST00000376751 SLC25A16P16260 332 aa16.66■□□□□ 0.26
RNF39-202ENST00000376751 RNASEKQ6P5S7 137 aaKnown RBP16.66■□□□□ 0.26
RNF39-202ENST00000376751 REC114Q7Z4M0 266 aa16.66■□□□□ 0.26
RNF39-202ENST00000376751 KIR2DL5AQ8N109 375 aa16.66■□□□□ 0.26
RNF39-202ENST00000376751 PTPN13Q12923 2485 aa16.66■□□□□ 0.26
RNF39-202ENST00000376751 TMEM189A5PLL7 270 aa16.66■□□□□ 0.26
RNF39-202ENST00000376751 ARL3P36405 182 aa16.66■□□□□ 0.26
RNF39-202ENST00000376751 TPPP3Q9BW30 176 aa16.66■□□□□ 0.26
RNF39-202ENST00000376751 FBLL1A6NHQ2 334 aaKnown RBP16.65■□□□□ 0.26
RNF39-202ENST00000376751 SLC50A1Q9BRV3 221 aa16.65■□□□□ 0.26
RNF39-202ENST00000376751 KLK15Q9H2R5 256 aa16.65■□□□□ 0.26
RNF39-202ENST00000376751 RIGQ13278 110 aa16.64■□□□□ 0.25
RNF39-202ENST00000376751 GATD1Q8NB37 220 aa16.64■□□□□ 0.25
RNF39-202ENST00000376751 UNQ9165/PRO28630Q6UXU0 137 aa16.64■□□□□ 0.25
RNF39-202ENST00000376751 LCNL1Q6ZST4 164 aa16.64■□□□□ 0.25
RNF39-202ENST00000376751 MAPK1IP1LQ8NDC0 245 aa16.64■□□□□ 0.25
RNF39-202ENST00000376751 M0QZK8 103 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 353 ms