RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 IGKV2-40A0A087WW87 121 aaPredicted RBP13.5□□□□□ -0.25
CTTN-203ENST00000376561 IGKV2D-40P01614 121 aaPredicted RBP13.5□□□□□ -0.25
CTTN-203ENST00000376561 S100A6P06703 90 aa13.5□□□□□ -0.25
CTTN-203ENST00000376561 FAM106AQ4KMX7 169 aa13.5□□□□□ -0.25
CTTN-203ENST00000376561 LCN12Q6JVE5 192 aa13.5□□□□□ -0.25
CTTN-203ENST00000376561 C8orf86Q6ZUL3 223 aa13.5□□□□□ -0.25
CTTN-203ENST00000376561 UBE2E2Q96LR5 201 aa13.5□□□□□ -0.25
CTTN-203ENST00000376561 ESM1Q9NQ30 184 aa13.5□□□□□ -0.25
CTTN-203ENST00000376561 ZNF492Q9P255 531 aa13.5□□□□□ -0.25
CTTN-203ENST00000376561 SMIM27A0A1W2PRY6 76 aa13.49□□□□□ -0.25
CTTN-203ENST00000376561 A0A1W2PS18 150 aa13.49□□□□□ -0.25
CTTN-203ENST00000376561 C19orf71A6NCJ1 209 aa13.49□□□□□ -0.25
CTTN-203ENST00000376561 ZNF705FA8MVS1 300 aaPredicted RBP13.49□□□□□ -0.25
CTTN-203ENST00000376561 TM4SF20Q53R12 229 aa13.49□□□□□ -0.25
CTTN-203ENST00000376561 FRZBQ92765 325 aa13.49□□□□□ -0.25
CTTN-203ENST00000376561 GRAMD2BQ96HH9 432 aa13.49□□□□□ -0.25
CTTN-203ENST00000376561 LGALS1P09382 135 aaKnown RBP13.49□□□□□ -0.25
CTTN-203ENST00000376561 RNF182Q8N6D2 247 aa13.49□□□□□ -0.25
CTTN-203ENST00000376561 ASCL2Q99929 193 aa13.49□□□□□ -0.25
CTTN-203ENST00000376561 SAV1Q9H4B6 383 aaPredicted RBP13.49□□□□□ -0.25
CTTN-203ENST00000376561 IGHV7-4-1A0A0J9YVY3 117 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 HIST1H2BKO60814 126 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 HIST1H2BJP06899 126 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 HIST1H2BOP23527 126 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 HIST1H2BBP33778 126 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 TCL1AP56279 114 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 HIST1H2BDP58876 126 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 SNRPEP62304 92 aaKnown RBP13.48□□□□□ -0.25
CTTN-203ENST00000376561 HIST1H2BCP62807 126 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 HIST2H2BEQ16778 126 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.48□□□□□ -0.25
CTTN-203ENST00000376561 KLHDC1Q8N7A1 406 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 HIST1H2BHQ93079 126 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 HIST1H2BNQ99877 126 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 HIST1H2BMQ99879 126 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 TRAV8-2A0A0B4J237 113 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 K7EMT4 169 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 Q6ZSV7 163 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 ZC2HC1AQ96GY0 325 aa13.48□□□□□ -0.25
CTTN-203ENST00000376561 C5orf52A6NGY3 159 aa13.47□□□□□ -0.25
CTTN-203ENST00000376561 TRGC1P0CF51 173 aa13.47□□□□□ -0.25
CTTN-203ENST00000376561 GBGT1Q8N5D6 347 aa13.47□□□□□ -0.25
CTTN-203ENST00000376561 DAZAP1Q96EP5 407 aaKnown RBP13.47□□□□□ -0.25
CTTN-203ENST00000376561 SMR3AQ99954 134 aa13.47□□□□□ -0.25
CTTN-203ENST00000376561 RHPN1-AS1Q9BWJ2 59 aa13.47□□□□□ -0.25
CTTN-203ENST00000376561 TMEM160Q9NX00 188 aa13.47□□□□□ -0.25
CTTN-203ENST00000376561 ANK3Q12955 4377 aaKnown RBP13.47□□□□□ -0.25
CTTN-203ENST00000376561 FBLL1A6NHQ2 334 aaKnown RBP13.47□□□□□ -0.25
CTTN-203ENST00000376561 P01737 135 aa13.47□□□□□ -0.25
CTTN-203ENST00000376561 ACTL10Q5JWF8 245 aa13.47□□□□□ -0.25
CTTN-203ENST00000376561 VGLL1Q99990 258 aa13.47□□□□□ -0.25
CTTN-203ENST00000376561 RPP21Q9H633 154 aaKnown RBP13.47□□□□□ -0.25
CTTN-203ENST00000376561 TSKUQ8WUA8 353 aa13.46□□□□□ -0.25
CTTN-203ENST00000376561 SMPXQ9UHP9 88 aa13.46□□□□□ -0.25
CTTN-203ENST00000376561 PRAC2D3DTV9 90 aa13.45□□□□□ -0.26
CTTN-203ENST00000376561 SCGB2A2Q13296 93 aa13.45□□□□□ -0.26
CTTN-203ENST00000376561 MRPL53Q96EL3 112 aaKnown RBP13.45□□□□□ -0.26
CTTN-203ENST00000376561 C16orf92Q96LL3 132 aa13.45□□□□□ -0.26
CTTN-203ENST00000376561 C8orf49Q96NF6 230 aa13.45□□□□□ -0.26
CTTN-203ENST00000376561 UFC1Q9Y3C8 167 aa13.45□□□□□ -0.26
CTTN-203ENST00000376561 IGHV4OR15-8A0A075B7B6 117 aa13.45□□□□□ -0.26
CTTN-203ENST00000376561 A0A087WW49 117 aa13.45□□□□□ -0.26
CTTN-203ENST00000376561 NPIPB6E9PJ23 425 aa13.45□□□□□ -0.26
CTTN-203ENST00000376561 FABP9Q0Z7S8 132 aa13.45□□□□□ -0.26
CTTN-203ENST00000376561 CT83Q5H943 113 aa13.45□□□□□ -0.26
CTTN-203ENST00000376561 SPINK4O60575 86 aa13.44□□□□□ -0.26
CTTN-203ENST00000376561 EDN2P20800 178 aa13.44□□□□□ -0.26
CTTN-203ENST00000376561 SAPCD1Q5SSQ6 148 aa13.44□□□□□ -0.26
CTTN-203ENST00000376561 PRR25Q96S07 402 aa13.44□□□□□ -0.26
CTTN-203ENST00000376561 CLEC5AQ9NY25 188 aa13.44□□□□□ -0.26
CTTN-203ENST00000376561 TRAPPC1Q9Y5R8 145 aa13.44□□□□□ -0.26
CTTN-203ENST00000376561 CUBNO60494 3623 aa13.44□□□□□ -0.26
CTTN-203ENST00000376561 RBAKDNA6NC62 111 aa13.44□□□□□ -0.26
CTTN-203ENST00000376561 IZUMO1RA6ND01 250 aa13.44□□□□□ -0.26
CTTN-203ENST00000376561 FRMD6-AS1P0C7T7 363 aa13.44□□□□□ -0.26
CTTN-203ENST00000376561 CRIP1P50238 77 aa13.44□□□□□ -0.26
CTTN-203ENST00000376561 RPL19P84098 196 aaKnown RBP13.44□□□□□ -0.26
CTTN-203ENST00000376561 Q8TAT8 98 aa13.44□□□□□ -0.26
CTTN-203ENST00000376561 NEU1Q99519 415 aa13.44□□□□□ -0.26
CTTN-203ENST00000376561 NOTCH2Q04721 2471 aa13.43□□□□□ -0.26
CTTN-203ENST00000376561 NDUFA6P56556 154 aa13.43□□□□□ -0.26
CTTN-203ENST00000376561 NAT8BQ9UHF3 227 aa13.43□□□□□ -0.26
CTTN-203ENST00000376561 TMEM213A2RRL7 107 aa13.43□□□□□ -0.26
CTTN-203ENST00000376561 HIGD1CA8MV81 97 aa13.43□□□□□ -0.26
CTTN-203ENST00000376561 A8MWL6 223 aa13.43□□□□□ -0.26
CTTN-203ENST00000376561 CT45A10P0DMU9 189 aa13.43□□□□□ -0.26
CTTN-203ENST00000376561 RPL11P62913 178 aaKnown RBP13.43□□□□□ -0.26
CTTN-203ENST00000376561 TCTEX1D4Q5JR98 221 aa13.43□□□□□ -0.26
CTTN-203ENST00000376561 COX8CQ7Z4L0 72 aa13.43□□□□□ -0.26
CTTN-203ENST00000376561 NUP35Q8NFH5 326 aa13.43□□□□□ -0.26
CTTN-203ENST00000376561 OR4B1Q8NGF8 309 aa13.43□□□□□ -0.26
CTTN-203ENST00000376561 NRN1Q9NPD7 142 aa13.43□□□□□ -0.26
CTTN-203ENST00000376561 UBE2CO00762 179 aa13.42□□□□□ -0.26
CTTN-203ENST00000376561 SOCS3O14543 225 aa13.42□□□□□ -0.26
CTTN-203ENST00000376561 SRD5A1P18405 259 aa13.42□□□□□ -0.26
CTTN-203ENST00000376561 CBLN1P23435 193 aa13.42□□□□□ -0.26
CTTN-203ENST00000376561 HOXD3P31249 432 aaPredicted RBP13.42□□□□□ -0.26
CTTN-203ENST00000376561 CDX1P47902 265 aaPredicted RBP13.42□□□□□ -0.26
CTTN-203ENST00000376561 ERCC8Q13216 396 aa13.42□□□□□ -0.26
CTTN-203ENST00000376561 C18orf65Q6ZTR6 163 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms