RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 FAM120AOSQ5T036 256 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 TMEM219Q86XT9 240 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 FER1L6-AS1Q8NA97 138 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 ARPC1AQ92747 370 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 TTTY13Q9BZ97 58 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 ABCA2Q9BZC7 2435 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 PIEZO1Q92508 2521 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 FNDC10F2Z333 226 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 IGHV3-11P01762 117 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 COTL1Q14019 142 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 TMEM30BQ3MIR4 351 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 TEX36Q5VZQ5 186 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 RABAC1Q9UI14 185 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 RPL7P18124 248 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 FOXC2Q99958 501 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 SRD5A1P18405 259 aa11.41□□□□□ -0.58
TNFRSF1B-201ENST00000376259 LCNL1Q6ZST4 164 aa11.41□□□□□ -0.58
TNFRSF1B-201ENST00000376259 ATP5L2Q7Z4Y8 100 aa11.41□□□□□ -0.58
TNFRSF1B-201ENST00000376259 MSRB1Q9NZV6 116 aa11.41□□□□□ -0.58
TNFRSF1B-201ENST00000376259 SH2D1AO60880 128 aa11.41□□□□□ -0.58
TNFRSF1B-201ENST00000376259 IGKV1-17P01599 117 aa11.41□□□□□ -0.58
TNFRSF1B-201ENST00000376259 SPATA12Q7Z6I5 190 aa11.41□□□□□ -0.58
TNFRSF1B-201ENST00000376259 A1L4Q6 167 aa11.4□□□□□ -0.58
TNFRSF1B-201ENST00000376259 ARL6IP6Q8N6S5 226 aa11.4□□□□□ -0.58
TNFRSF1B-201ENST00000376259 IGLV2-23P01705 113 aa11.4□□□□□ -0.58
TNFRSF1B-201ENST00000376259 LEPP41159 167 aa11.4□□□□□ -0.58
TNFRSF1B-201ENST00000376259 LOXL1Q08397 574 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF1B-201ENST00000376259 MTURNQ8N3F0 131 aa11.4□□□□□ -0.58
TNFRSF1B-201ENST00000376259 FAM169BQ8N8A8 192 aa11.4□□□□□ -0.58
TNFRSF1B-201ENST00000376259 CR1LQ2VPA4 569 aa11.4□□□□□ -0.58
TNFRSF1B-201ENST00000376259 NUP37Q8NFH4 326 aa11.4□□□□□ -0.58
TNFRSF1B-201ENST00000376259 C16orf92Q96LL3 132 aa11.4□□□□□ -0.58
TNFRSF1B-201ENST00000376259 NDUFB8O95169 186 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 PAX1P15863 534 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 GATA1P15976 413 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 FAM231DQ6ZW35 169 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 GTSCR1Q86UQ5 136 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 MAP1LC3AQ9H492 121 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 GP9P14770 177 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 TMEM78Q5T7P6 136 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 IFI27L1Q96BM0 104 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 ST20Q9HBF5 79 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 TRBV19A0A075B6N1 114 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 A6NDN8 102 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 PSG3Q16557 428 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 FAM71F2Q6NXP2 309 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 CHCHD1Q96BP2 118 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 VGLL1Q99990 258 aa11.39□□□□□ -0.59
TNFRSF1B-201ENST00000376259 C2orf70A6NJV1 201 aa11.38□□□□□ -0.59
TNFRSF1B-201ENST00000376259 NDUFA3O95167 84 aa11.38□□□□□ -0.59
TNFRSF1B-201ENST00000376259 GOSR1O95249 250 aa11.38□□□□□ -0.59
TNFRSF1B-201ENST00000376259 C15orf32Q32M92 178 aa11.38□□□□□ -0.59
TNFRSF1B-201ENST00000376259 MBD6Q96DN6 1003 aa11.38□□□□□ -0.59
TNFRSF1B-201ENST00000376259 G3V318 75 aa11.38□□□□□ -0.59
TNFRSF1B-201ENST00000376259 TMEM97Q5BJF2 176 aa11.38□□□□□ -0.59
TNFRSF1B-201ENST00000376259 IGFL2Q6UWQ7 119 aa11.38□□□□□ -0.59
TNFRSF1B-201ENST00000376259 ZNF502Q8TBZ5 544 aa11.38□□□□□ -0.59
TNFRSF1B-201ENST00000376259 RHOGP84095 191 aa11.38□□□□□ -0.59
TNFRSF1B-201ENST00000376259 PSG9Q00887 426 aa11.38□□□□□ -0.59
TNFRSF1B-201ENST00000376259 PET117Q6UWS5 81 aa11.38□□□□□ -0.59
TNFRSF1B-201ENST00000376259 TRAV26-2A0A0B4J265 109 aa11.37□□□□□ -0.59
TNFRSF1B-201ENST00000376259 K7ERU9 68 aa11.37□□□□□ -0.59
TNFRSF1B-201ENST00000376259 BMI1P35226 326 aa11.37□□□□□ -0.59
TNFRSF1B-201ENST00000376259 GTF2H5Q6ZYL4 71 aa11.37□□□□□ -0.59
TNFRSF1B-201ENST00000376259 MRPS16Q9Y3D3 137 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1B-201ENST00000376259 THAP8Q8NA92 274 aa11.37□□□□□ -0.59
TNFRSF1B-201ENST00000376259 SHANK2-AS3Q9BTD1 123 aa11.37□□□□□ -0.59
TNFRSF1B-201ENST00000376259 NHP2Q9NX24 153 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1B-201ENST00000376259 PEF1Q9UBV8 284 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1B-201ENST00000376259 ZNF491Q8N8L2 437 aa11.37□□□□□ -0.59
TNFRSF1B-201ENST00000376259 Q8N976 141 aa11.37□□□□□ -0.59
TNFRSF1B-201ENST00000376259 MEGF9Q9H1U4 602 aa11.37□□□□□ -0.59
TNFRSF1B-201ENST00000376259 TGFAP01135 160 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 LTAP01374 205 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 ESDP10768 282 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 C5orf64Q2M2E5 130 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 RASL11AQ6T310 242 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 SCGB1D4Q6XE38 83 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 PIP4P1Q86T03 277 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 ORAOV1Q8WV07 137 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 HBDP02042 147 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 ANKRD39Q53RE8 183 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 MYOZ3Q8TDC0 251 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 SIGLEC8Q9NYZ4 499 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 SOX21Q9Y651 276 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 NPYP01303 97 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 PF4V1P10720 104 aa11.36□□□□□ -0.59
TNFRSF1B-201ENST00000376259 LRBAP50851 2863 aa11.35□□□□□ -0.59
TNFRSF1B-201ENST00000376259 GAGE12BA1L429 117 aa11.35□□□□□ -0.59
TNFRSF1B-201ENST00000376259 SHISA9B4DS77 424 aa11.35□□□□□ -0.59
TNFRSF1B-201ENST00000376259 PCP2Q8IVA1 136 aa11.35□□□□□ -0.59
TNFRSF1B-201ENST00000376259 DKK2Q9UBU2 259 aa11.35□□□□□ -0.59
TNFRSF1B-201ENST00000376259 SFTPCP11686 197 aa11.35□□□□□ -0.59
TNFRSF1B-201ENST00000376259 PLP1P60201 277 aa11.35□□□□□ -0.59
TNFRSF1B-201ENST00000376259 SAPCD1Q5SSQ6 148 aa11.35□□□□□ -0.59
TNFRSF1B-201ENST00000376259 BVES-AS1Q5T3Y7 98 aa11.35□□□□□ -0.59
TNFRSF1B-201ENST00000376259 BRD3OSQ6XYD6 125 aa11.35□□□□□ -0.59
TNFRSF1B-201ENST00000376259 FAM231BA6NCW3 169 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 CTRLP40313 264 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 DLX6P56179 175 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms