RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 HLA-DMBP28068 263 aa7.89□□□□□ -1.15
PDPN-203ENST00000376061 IGFL4Q6B9Z1 124 aa7.89□□□□□ -1.15
PDPN-203ENST00000376061 C2CD4CQ8TF44 421 aa7.89□□□□□ -1.15
PDPN-203ENST00000376061 KRTAP9-2Q9BYQ4 174 aa7.89□□□□□ -1.15
PDPN-203ENST00000376061 PARLQ9H300 379 aa7.89□□□□□ -1.15
PDPN-203ENST00000376061 AAMDCQ9H7C9 122 aa7.89□□□□□ -1.15
PDPN-203ENST00000376061 NRN1Q9NPD7 142 aa7.89□□□□□ -1.15
PDPN-203ENST00000376061 EPDR1Q9UM22 224 aa7.89□□□□□ -1.15
PDPN-203ENST00000376061 IGKV3-7A0A075B6H7 116 aa7.88□□□□□ -1.15
PDPN-203ENST00000376061 RPL11P62913 178 aaKnown RBP7.88□□□□□ -1.15
PDPN-203ENST00000376061 RNF182Q8N6D2 247 aa7.88□□□□□ -1.15
PDPN-203ENST00000376061 LINC00482Q8N8I6 264 aa7.88□□□□□ -1.15
PDPN-203ENST00000376061 CLRN3Q8NCR9 226 aa7.88□□□□□ -1.15
PDPN-203ENST00000376061 DYNLRB2Q8TF09 96 aa7.88□□□□□ -1.15
PDPN-203ENST00000376061 HIST1H2BAQ96A08 127 aa7.88□□□□□ -1.15
PDPN-203ENST00000376061 SMIM7Q9BQ49 75 aa7.88□□□□□ -1.15
PDPN-203ENST00000376061 ATG101Q9BSB4 218 aa7.88□□□□□ -1.15
PDPN-203ENST00000376061 RPH3ALQ9UNE2 315 aa7.88□□□□□ -1.15
PDPN-203ENST00000376061 VWFP04275 2813 aa7.88□□□□□ -1.15
PDPN-203ENST00000376061 TRBV20OR9-2A0A075B6H5 130 aa7.87□□□□□ -1.15
PDPN-203ENST00000376061 ZNF727A8MUV8 499 aa7.87□□□□□ -1.15
PDPN-203ENST00000376061 TCRAP04437 139 aa7.87□□□□□ -1.15
PDPN-203ENST00000376061 AKR1C3P42330 323 aa7.87□□□□□ -1.15
PDPN-203ENST00000376061 GUCA2BQ16661 112 aa7.87□□□□□ -1.15
PDPN-203ENST00000376061 ZNF674Q2M3X9 581 aa7.87□□□□□ -1.15
PDPN-203ENST00000376061 TMEM61Q8N0U2 210 aa7.87□□□□□ -1.15
PDPN-203ENST00000376061 GBGT1Q8N5D6 347 aa7.87□□□□□ -1.15
PDPN-203ENST00000376061 CMTM2Q8TAZ6 248 aa7.87□□□□□ -1.15
PDPN-203ENST00000376061 DCANP1Q8TF63 244 aa7.87□□□□□ -1.15
PDPN-203ENST00000376061 C16orf92Q96LL3 132 aa7.87□□□□□ -1.15
PDPN-203ENST00000376061 MS4A6AQ9H2W1 248 aa7.87□□□□□ -1.15
PDPN-203ENST00000376061 SIGLEC8Q9NYZ4 499 aa7.87□□□□□ -1.15
PDPN-203ENST00000376061 STAB1Q9NY15 2570 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 KRTAP9-6A0A140TA67 174 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 DIRC3C9JPN6 131 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 ISLRO14498 428 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 APOC3P02656 99 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 PRB4P10163 310 aaPredicted RBP7.86□□□□□ -1.15
PDPN-203ENST00000376061 RPL35P42766 123 aaKnown RBP7.86□□□□□ -1.15
PDPN-203ENST00000376061 DEFB114Q30KQ6 69 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 FAM74A3Q4VXF1 159 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 SAMD13Q5VXD3 122 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 GOLT1AQ6ZVE7 132 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 TMEM158Q8WZ71 300 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 MRPL53Q96EL3 112 aaKnown RBP7.86□□□□□ -1.15
PDPN-203ENST00000376061 C20orf173Q96LM9 149 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 LINC00479Q96M42 142 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 ZNF747Q9BV97 191 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 PRELID1Q9Y255 219 aa7.86□□□□□ -1.15
PDPN-203ENST00000376061 TRAV34A0A0B4J273 112 aa7.85□□□□□ -1.15
PDPN-203ENST00000376061 ZNF705FA8MVS1 300 aaPredicted RBP7.85□□□□□ -1.15
PDPN-203ENST00000376061 K7EQG2 157 aa7.85□□□□□ -1.15
PDPN-203ENST00000376061 CSN1S1P47710 185 aa7.85□□□□□ -1.15
PDPN-203ENST00000376061 TFPI2P48307 235 aa7.85□□□□□ -1.15
PDPN-203ENST00000376061 CNN1P51911 297 aaKnown RBP7.85□□□□□ -1.15
PDPN-203ENST00000376061 CD300EQ496F6 205 aaPredicted RBP7.85□□□□□ -1.15
PDPN-203ENST00000376061 CENPWQ5EE01 88 aa7.85□□□□□ -1.15
PDPN-203ENST00000376061 LCN12Q6JVE5 192 aa7.85□□□□□ -1.15
PDPN-203ENST00000376061 FAM24BQ8N5W8 94 aa7.85□□□□□ -1.15
PDPN-203ENST00000376061 IGF2BP2-AS1Q96M15 143 aa7.85□□□□□ -1.15
PDPN-203ENST00000376061 NIPSNAP3BQ9BS92 247 aa7.85□□□□□ -1.15
PDPN-203ENST00000376061 CLEC5AQ9NY25 188 aa7.85□□□□□ -1.15
PDPN-203ENST00000376061 KLF12Q9Y4X4 402 aa7.85□□□□□ -1.15
PDPN-203ENST00000376061 IGKV2-40A0A087WW87 121 aaPredicted RBP7.84□□□□□ -1.15
PDPN-203ENST00000376061 TRAV8-1A0A0A6YYK1 113 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 C9JCJ5 164 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 PRAC2D3DTV9 90 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 TSPAN4O14817 238 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 SAP30O75446 220 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 IGKV2D-40P01614 121 aaPredicted RBP7.84□□□□□ -1.15
PDPN-203ENST00000376061 IGLV2-11P01706 119 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 PSG3Q16557 428 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 TMEM183BQ1AE95 376 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 C12orf54Q6X4T0 127 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 Q86TA4 180 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 WFDC3Q8IUB2 231 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 C3orf56Q8N813 242 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 TMEM75Q8N9X5 138 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 ZNF738Q8NE65 137 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 SPATA3Q8NHX4 192 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 NAT8Q9UHE5 227 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 COL6A5A8TX70 2615 aa7.84□□□□□ -1.15
PDPN-203ENST00000376061 TRAV2A0A0B4J234 112 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 TRAV25A0A0B4J276 109 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 SERTM2A0A1B0GWG4 89 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 IZUMO1RA6ND01 250 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 PGPEP1LA6NFU8 196 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 DNASE2O00115 360 aaPredicted RBP7.84□□□□□ -1.16
PDPN-203ENST00000376061 ID1P41134 155 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 GNG4P50150 75 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 UBE2G1P62253 170 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 TMEM241Q24JQ0 296 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 RBPMS2Q6ZRY4 209 aaKnown RBP7.84□□□□□ -1.16
PDPN-203ENST00000376061 SVBPQ8N300 66 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 TVP23CQ96ET8 276 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 FMC1Q96HJ9 113 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 SGK494Q96LW2 274 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 SDF2L1Q9HCN8 221 aa7.84□□□□□ -1.16
PDPN-203ENST00000376061 TRBV6-1A0A0K0K1D8 114 aa7.83□□□□□ -1.16
PDPN-203ENST00000376061 K7EQM0 130 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms