RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 PDE6HQ13956 83 aa13.48□□□□□ -0.25
VARS-215ENST00000375663 TMEM158Q8WZ71 300 aa13.48□□□□□ -0.25
VARS-215ENST00000375663 YPEL4Q96NS1 127 aa13.48□□□□□ -0.25
VARS-215ENST00000375663 OCIAD2Q56VL3 154 aa13.48□□□□□ -0.25
VARS-215ENST00000375663 LINC00527Q9UJ94 153 aa13.48□□□□□ -0.25
VARS-215ENST00000375663 CHTOPQ9Y3Y2 248 aaKnown RBP13.48□□□□□ -0.25
VARS-215ENST00000375663 LOXP28300 417 aaPredicted RBP13.48□□□□□ -0.25
VARS-215ENST00000375663 PLXNB1O43157 2135 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 ZNF815PA8K554 130 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 SNCGO76070 127 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 FRMD6-AS1P0C7T7 363 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 KLRB1Q12918 225 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 FAM104BQ5XKR9 115 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 VMO1Q7Z5L0 202 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 CYSLTR1Q9Y271 337 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 LY6HO94772 140 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 COL8A2P25067 703 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 TMEM75Q8N9X5 138 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 THAP8Q8NA92 274 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 THBDP07204 575 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 SMAGPQ0VAQ4 97 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 TEX36Q5VZQ5 186 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 DDB2Q92466 427 aa13.47□□□□□ -0.25
VARS-215ENST00000375663 HAX1O00165 279 aa13.46□□□□□ -0.25
VARS-215ENST00000375663 HOXA3O43365 443 aaPredicted RBP13.46□□□□□ -0.25
VARS-215ENST00000375663 WIPF2Q8TF74 440 aaPredicted RBP13.46□□□□□ -0.25
VARS-215ENST00000375663 SIGMAR1Q99720 223 aa13.46□□□□□ -0.25
VARS-215ENST00000375663 E7EQL1 145 aa13.46□□□□□ -0.25
VARS-215ENST00000375663 LINC00311Q8N616 119 aa13.46□□□□□ -0.25
VARS-215ENST00000375663 GEMIN7Q9H840 131 aaKnown RBP13.46□□□□□ -0.25
VARS-215ENST00000375663 ATP5J2P56134 94 aa13.46□□□□□ -0.26
VARS-215ENST00000375663 SRSF8Q9BRL6 282 aaKnown RBP13.46□□□□□ -0.26
VARS-215ENST00000375663 PIMREGQ9BSJ6 248 aa13.46□□□□□ -0.26
VARS-215ENST00000375663 PAX1P15863 534 aa13.45□□□□□ -0.26
VARS-215ENST00000375663 CD300EQ496F6 205 aaPredicted RBP13.45□□□□□ -0.26
VARS-215ENST00000375663 GAGE13Q4V321 117 aa13.45□□□□□ -0.26
VARS-215ENST00000375663 MORN5Q5VZ52 161 aa13.45□□□□□ -0.26
VARS-215ENST00000375663 C8orf49Q96NF6 230 aa13.45□□□□□ -0.26
VARS-215ENST00000375663 PAX8Q06710 450 aa13.45□□□□□ -0.26
VARS-215ENST00000375663 SPRNQ5BIV9 151 aa13.45□□□□□ -0.26
VARS-215ENST00000375663 IGLC1P0CG04 106 aa13.45□□□□□ -0.26
VARS-215ENST00000375663 SETD2Q9BYW2 2564 aaPredicted RBP13.44□□□□□ -0.26
VARS-215ENST00000375663 CD7P09564 240 aa13.44□□□□□ -0.26
VARS-215ENST00000375663 COX8AP10176 69 aa13.44□□□□□ -0.26
VARS-215ENST00000375663 C3orf36Q3SXR2 165 aa13.44□□□□□ -0.26
VARS-215ENST00000375663 TLN1Q9Y490 2541 aaKnown RBP13.44□□□□□ -0.26
VARS-215ENST00000375663 C5orf42Q9H799 3197 aa13.44□□□□□ -0.26
VARS-215ENST00000375663 P0C879 139 aa13.44□□□□□ -0.26
VARS-215ENST00000375663 SIGLEC15Q6ZMC9 328 aa13.44□□□□□ -0.26
VARS-215ENST00000375663 ZC2HC1AQ96GY0 325 aa13.44□□□□□ -0.26
VARS-215ENST00000375663 TNFRSF6BO95407 300 aa13.43□□□□□ -0.26
VARS-215ENST00000375663 TTC32Q5I0X7 151 aa13.43□□□□□ -0.26
VARS-215ENST00000375663 MTURNQ8N3F0 131 aa13.43□□□□□ -0.26
VARS-215ENST00000375663 KLF5Q13887 457 aaPredicted RBP13.43□□□□□ -0.26
VARS-215ENST00000375663 BVES-AS1Q5T3Y7 98 aa13.43□□□□□ -0.26
VARS-215ENST00000375663 CHAC1Q9BUX1 264 aa13.43□□□□□ -0.26
VARS-215ENST00000375663 FAM215AQ9Y5M1 114 aa13.43□□□□□ -0.26
VARS-215ENST00000375663 OOSP1A8MZH6 123 aa13.43□□□□□ -0.26
VARS-215ENST00000375663 CIRBPQ14011 172 aaKnown RBP13.43□□□□□ -0.26
VARS-215ENST00000375663 TMEM14CQ9P0S9 112 aa13.43□□□□□ -0.26
VARS-215ENST00000375663 MUC22E2RYF6 1773 aaPredicted RBP13.42□□□□□ -0.26
VARS-215ENST00000375663 TLN2Q9Y4G6 2542 aa13.42□□□□□ -0.26
VARS-215ENST00000375663 IGHV3OR16-12A0A075B7B8 117 aa13.42□□□□□ -0.26
VARS-215ENST00000375663 IGKV1OR2-108A0A075B7D4 117 aa13.42□□□□□ -0.26
VARS-215ENST00000375663 PRSS46E5RG02 174 aa13.42□□□□□ -0.26
VARS-215ENST00000375663 ERCC8Q13216 396 aa13.42□□□□□ -0.26
VARS-215ENST00000375663 ZNF562Q6V9R5 426 aa13.42□□□□□ -0.26
VARS-215ENST00000375663 H7C1H1 209 aa13.42□□□□□ -0.26
VARS-215ENST00000375663 NDPQ00604 133 aa13.42□□□□□ -0.26
VARS-215ENST00000375663 MRPL51Q4U2R6 128 aaKnown RBP13.42□□□□□ -0.26
VARS-215ENST00000375663 SIGLEC8Q9NYZ4 499 aa13.42□□□□□ -0.26
VARS-215ENST00000375663 IGLC7A0M8Q6 106 aa13.41□□□□□ -0.26
VARS-215ENST00000375663 LTAP01374 205 aa13.41□□□□□ -0.26
VARS-215ENST00000375663 MINOS1Q5TGZ0 78 aa13.41□□□□□ -0.26
VARS-215ENST00000375663 MINOS1-NBL1R4GNA1 71 aa13.41□□□□□ -0.26
VARS-215ENST00000375663 BRWD1-AS2P59051 145 aa13.41□□□□□ -0.26
VARS-215ENST00000375663 CEP295Q9C0D2 2601 aa13.41□□□□□ -0.26
VARS-215ENST00000375663 ESDP10768 282 aa13.41□□□□□ -0.26
VARS-215ENST00000375663 PLNP26678 52 aa13.41□□□□□ -0.26
VARS-215ENST00000375663 CEACAM8P31997 349 aaPredicted RBP13.41□□□□□ -0.26
VARS-215ENST00000375663 TNFRSF18Q9Y5U5 241 aa13.41□□□□□ -0.26
VARS-215ENST00000375663 H3BRM9 83 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 LHBP01229 141 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 PATE2Q6UY27 113 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 M0R1W7 72 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 OVOL1O14753 267 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 PROP1O75360 226 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 PRTN3P24158 256 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 PRSS57Q6UWY2 283 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 FAM167A-AS1Q96KT0 104 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 DYSFO75923 2080 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 HIVEP3Q5T1R4 2406 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 TRAV40A0A0B4J280 105 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 TMEM219Q86XT9 240 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 PRR25Q96S07 402 aa13.4□□□□□ -0.26
VARS-215ENST00000375663 CCL25O15444 150 aa13.4□□□□□ -0.27
VARS-215ENST00000375663 NDUFB8O95169 186 aa13.4□□□□□ -0.27
VARS-215ENST00000375663 LGALS9BQ3B8N2 356 aa13.4□□□□□ -0.27
VARS-215ENST00000375663 LGALS9CQ6DKI2 356 aa13.4□□□□□ -0.27
VARS-215ENST00000375663 SORL1Q92673 2214 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms