RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 IQCJQ1A5X6 159 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 TMEM183BQ1AE95 376 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 PAPPA-AS1Q5QFB9 102 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 HCP5Q6MZN7 132 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 OR8I2Q8N0Y5 310 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 NPBQ8NG41 125 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 SPAG8Q99932 426 aaPredicted RBP3.72□□□□□ -1.81
USP48-202ENST00000374730 FBXL15Q9H469 300 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 DPM3Q9P2X0 92 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 ONECUT1Q9UBC0 465 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 KLF12Q9Y4X4 402 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 ARHGAP32A7KAX9 2087 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 PTPN13Q12923 2485 aa3.71□□□□□ -1.81
USP48-202ENST00000374730 TENM4Q6N022 2769 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 ANKRD17O75179 2603 aaKnown RBP3.71□□□□□ -1.82
USP48-202ENST00000374730 LOC105371242A0A075B767 164 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 IZUMO1RA6ND01 250 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 ZNF705GA8MUZ8 300 aaPredicted RBP3.71□□□□□ -1.82
USP48-202ENST00000374730 K7EIM0 57 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 FCN1O00602 326 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 IGHV3-48P01763 117 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 NBEAP1P0C6P0 100 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 HIST1H1EP10412 219 aaKnown RBP3.71□□□□□ -1.82
USP48-202ENST00000374730 MGST1P10620 155 aaKnown RBP3.71□□□□□ -1.82
USP48-202ENST00000374730 CRISP2P16562 243 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 ORM2P19652 201 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 CDKN1AP38936 164 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 GPR6P46095 362 aaPredicted RBP3.71□□□□□ -1.82
USP48-202ENST00000374730 DLX1P56177 255 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 TPPP2P59282 170 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 RAB4BP61018 213 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 UBE2G1P62253 170 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 RANP62826 216 aaKnown RBP3.71□□□□□ -1.82
USP48-202ENST00000374730 EBI3Q14213 229 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 OR10J3Q5JRS4 329 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 LDLRAD2Q5SZI1 272 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 MINOS1Q5TGZ0 78 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 TMEM136Q6ZRR5 245 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 C19orf35Q6ZS72 473 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 ATP5L2Q7Z4Y8 100 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 BAGE2Q86Y30 109 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 Q8N6K4 173 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 C5orf17Q8NAS9 161 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 OR1B1Q8NGR6 318 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 CMTM2Q8TAZ6 248 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 GRAMD2BQ96HH9 432 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 FMC1Q96HJ9 113 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 NOL4LQ96MY1 436 aaPredicted RBP3.71□□□□□ -1.82
USP48-202ENST00000374730 RBM14Q96PK6 669 aaKnown RBP3.71□□□□□ -1.82
USP48-202ENST00000374730 DUX3Q96PT4 197 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 TPPP3Q9BW30 176 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 RNASE7Q9H1E1 156 aaKnown RBP3.71□□□□□ -1.82
USP48-202ENST00000374730 OTORQ9NRC9 128 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 ZNF492Q9P255 531 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 TP53TG3Q9ULZ0 132 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 EPDR1Q9UM22 224 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 HIGD1AQ9Y241 93 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 MINOS1-NBL1R4GNA1 71 aa3.71□□□□□ -1.82
USP48-202ENST00000374730 ABCA1O95477 2261 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 NBASA2RRP1 2371 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 SPTBN1Q01082 2364 aaKnown RBP3.7□□□□□ -1.82
USP48-202ENST00000374730 IGLV11-55A0A075B6I3 123 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 TRAV30A0A087WSZ9 112 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 A0A087X0K7 114 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 KIR2DL5BA0A0G2JN68 375 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 KIR2DL5BA0A0G2JPC4 375 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 A0A1B0GUS0 222 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 H3BRN7 92 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 SERF1AO75920 110 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 LTAP01374 205 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 IGKV1-17P01599 117 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 TCRAP04437 139 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 SLC25A5P05141 298 aaKnown RBP3.7□□□□□ -1.82
USP48-202ENST00000374730 DDTP30046 118 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 SSTP61278 116 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 ARF6P62330 175 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 DEFA6Q01524 100 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 UBE2V1Q13404 147 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 FXYD3Q14802 87 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 PLGLAQ15195 96 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 MMDQ15546 238 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 USF2Q15853 346 aaPredicted RBP3.7□□□□□ -1.82
USP48-202ENST00000374730 C5orf64Q2M2E5 130 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 CD164L2Q6UWJ8 174 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 ZNF600Q6ZNG1 722 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 S100A7AQ86SG5 101 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 KIR2DL5AQ8N109 375 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 TMEM256Q8N2U0 113 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 TSKUQ8WUA8 353 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 GPR82Q96P67 336 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 RASL11BQ9BPW5 248 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 SHANK2-AS3Q9BTD1 123 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 SLC25A39Q9BZJ4 359 aaPredicted RBP3.7□□□□□ -1.82
USP48-202ENST00000374730 Q9H3A6 140 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 ZNF331Q9NQX6 463 aaPredicted RBP3.7□□□□□ -1.82
USP48-202ENST00000374730 MRPL27Q9P0M9 148 aaKnown RBP3.7□□□□□ -1.82
USP48-202ENST00000374730 NAT8BQ9UHF3 227 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 RNF24Q9Y225 148 aa3.7□□□□□ -1.82
USP48-202ENST00000374730 SOX21Q9Y651 276 aaPredicted RBP3.7□□□□□ -1.82
USP48-202ENST00000374730 HECTD1Q9ULT8 2610 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms