RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 ZNF492Q9P255 531 aa12.94□□□□□ -0.34
PTPN20-203ENST00000374342 SERTM2A0A1B0GWG4 89 aa12.94□□□□□ -0.34
PTPN20-203ENST00000374342 SMIM27A0A1W2PRY6 76 aa12.94□□□□□ -0.34
PTPN20-203ENST00000374342 LINC00322Q6ZN03 302 aaPredicted RBP12.94□□□□□ -0.34
PTPN20-203ENST00000374342 GBGT1Q8N5D6 347 aa12.94□□□□□ -0.34
PTPN20-203ENST00000374342 RNF182Q8N6D2 247 aa12.94□□□□□ -0.34
PTPN20-203ENST00000374342 GRAMD2BQ96HH9 432 aa12.94□□□□□ -0.34
PTPN20-203ENST00000374342 NDUFA6P56556 154 aa12.93□□□□□ -0.34
PTPN20-203ENST00000374342 FABP9Q0Z7S8 132 aa12.93□□□□□ -0.34
PTPN20-203ENST00000374342 FOXE3Q13461 319 aa12.93□□□□□ -0.34
PTPN20-203ENST00000374342 GLMPQ8WWB7 406 aa12.93□□□□□ -0.34
PTPN20-203ENST00000374342 RPP21Q9H633 154 aaKnown RBP12.93□□□□□ -0.34
PTPN20-203ENST00000374342 DNAJC9-AS1A6NH13 148 aa12.92□□□□□ -0.34
PTPN20-203ENST00000374342 ZNF705FA8MVS1 300 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-203ENST00000374342 SPINK4O60575 86 aa12.92□□□□□ -0.34
PTPN20-203ENST00000374342 P01737 135 aa12.92□□□□□ -0.34
PTPN20-203ENST00000374342 C8orf86Q6ZUL3 223 aa12.92□□□□□ -0.34
PTPN20-203ENST00000374342 TMEM86BQ8N661 226 aa12.92□□□□□ -0.34
PTPN20-203ENST00000374342 ZC2HC1AQ96GY0 325 aa12.92□□□□□ -0.34
PTPN20-203ENST00000374342 ZFP30Q9Y2G7 519 aa12.92□□□□□ -0.34
PTPN20-203ENST00000374342 ELANEP08246 267 aa12.92□□□□□ -0.34
PTPN20-203ENST00000374342 AKR1D1P51857 326 aa12.92□□□□□ -0.34
PTPN20-203ENST00000374342 DAZAP1Q96EP5 407 aaKnown RBP12.92□□□□□ -0.34
PTPN20-203ENST00000374342 TRAPPC1Q9Y5R8 145 aa12.92□□□□□ -0.34
PTPN20-203ENST00000374342 C19orf71A6NCJ1 209 aa12.91□□□□□ -0.34
PTPN20-203ENST00000374342 UBE2CO00762 179 aa12.91□□□□□ -0.34
PTPN20-203ENST00000374342 CBLN1P23435 193 aa12.91□□□□□ -0.34
PTPN20-203ENST00000374342 Q8N2B8 174 aa12.91□□□□□ -0.34
PTPN20-203ENST00000374342 ARL6IP6Q8N6S5 226 aa12.91□□□□□ -0.34
PTPN20-203ENST00000374342 C8orf49Q96NF6 230 aa12.91□□□□□ -0.34
PTPN20-203ENST00000374342 MEOX2P50222 304 aa12.9□□□□□ -0.34
PTPN20-203ENST00000374342 TM4SF20Q53R12 229 aa12.9□□□□□ -0.34
PTPN20-203ENST00000374342 LCN12Q6JVE5 192 aa12.9□□□□□ -0.34
PTPN20-203ENST00000374342 Q8TAT8 98 aa12.9□□□□□ -0.34
PTPN20-203ENST00000374342 DAZ1Q9NQZ3 744 aaKnown RBP12.9□□□□□ -0.34
PTPN20-203ENST00000374342 FASNP49327 2511 aaKnown RBP12.9□□□□□ -0.34
PTPN20-203ENST00000374342 SONP18583 2426 aaKnown RBP12.9□□□□□ -0.34
PTPN20-203ENST00000374342 HECTD1Q9ULT8 2610 aa12.9□□□□□ -0.34
PTPN20-203ENST00000374342 TRAV8-2A0A0B4J237 113 aa12.9□□□□□ -0.35
PTPN20-203ENST00000374342 FRMD6-AS1P0C7T7 363 aa12.9□□□□□ -0.35
PTPN20-203ENST00000374342 MRPL54Q6P161 138 aaKnown RBP12.9□□□□□ -0.35
PTPN20-203ENST00000374342 MYOZ3Q8TDC0 251 aa12.9□□□□□ -0.35
PTPN20-203ENST00000374342 TSKUQ8WUA8 353 aa12.9□□□□□ -0.35
PTPN20-203ENST00000374342 VGLL1Q99990 258 aa12.9□□□□□ -0.35
PTPN20-203ENST00000374342 IGHV7-4-1A0A0J9YVY3 117 aa12.89□□□□□ -0.35
PTPN20-203ENST00000374342 A0A1W2PS18 150 aa12.89□□□□□ -0.35
PTPN20-203ENST00000374342 IZUMO1RA6ND01 250 aa12.89□□□□□ -0.35
PTPN20-203ENST00000374342 LGALS1P09382 135 aaKnown RBP12.89□□□□□ -0.35
PTPN20-203ENST00000374342 RPL19P84098 196 aaKnown RBP12.89□□□□□ -0.35
PTPN20-203ENST00000374342 FAM106AQ4KMX7 169 aa12.89□□□□□ -0.35
PTPN20-203ENST00000374342 NEU1Q99519 415 aa12.89□□□□□ -0.35
PTPN20-203ENST00000374342 PRAC2D3DTV9 90 aa12.88□□□□□ -0.35
PTPN20-203ENST00000374342 CT45A10P0DMU9 189 aa12.88□□□□□ -0.35
PTPN20-203ENST00000374342 C16orf92Q96LL3 132 aa12.88□□□□□ -0.35
PTPN20-203ENST00000374342 NAT8BQ9UHF3 227 aa12.88□□□□□ -0.35
PTPN20-203ENST00000374342 AKAP9Q99996 3911 aa12.88□□□□□ -0.35
PTPN20-203ENST00000374342 FAM181BA6NEQ2 426 aa12.88□□□□□ -0.35
PTPN20-203ENST00000374342 HIGD1CA8MV81 97 aa12.88□□□□□ -0.35
PTPN20-203ENST00000374342 SNURFLB1AK76 121 aa12.88□□□□□ -0.35
PTPN20-203ENST00000374342 EDN2P20800 178 aa12.88□□□□□ -0.35
PTPN20-203ENST00000374342 CT83Q5H943 113 aa12.88□□□□□ -0.35
PTPN20-203ENST00000374342 NUP35Q8NFH5 326 aa12.88□□□□□ -0.35
PTPN20-203ENST00000374342 RHPN1-AS1Q9BWJ2 59 aa12.88□□□□□ -0.35
PTPN20-203ENST00000374342 FBLL1A6NHQ2 334 aaKnown RBP12.87□□□□□ -0.35
PTPN20-203ENST00000374342 A8MWL6 223 aa12.87□□□□□ -0.35
PTPN20-203ENST00000374342 GPHB5Q86YW7 130 aa12.87□□□□□ -0.35
PTPN20-203ENST00000374342 MRPL18Q9H0U6 180 aaKnown RBP12.87□□□□□ -0.35
PTPN20-203ENST00000374342 SELENOKQ9Y6D0 94 aa12.87□□□□□ -0.35
PTPN20-203ENST00000374342 NPIPB6E9PJ23 425 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 RPL11P62913 178 aaKnown RBP12.86□□□□□ -0.35
PTPN20-203ENST00000374342 ERCC8Q13216 396 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 TCF24Q7RTU0 167 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 KLHDC1Q8N7A1 406 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 RNF152Q8N8N0 203 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 OR4B1Q8NGF8 309 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 OR2D3Q8NGH3 330 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 UBE2E2Q96LR5 201 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 PRR25Q96S07 402 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 ESM1Q9NQ30 184 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 IGHV4OR15-8A0A075B7B6 117 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 A0A087WW49 117 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 RAB4BP61018 213 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 MRPL53Q96EL3 112 aaKnown RBP12.86□□□□□ -0.35
PTPN20-203ENST00000374342 GPR61Q9BZJ8 451 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 UFC1Q9Y3C8 167 aa12.86□□□□□ -0.35
PTPN20-203ENST00000374342 IGKV3-7A0A075B6H7 116 aa12.85□□□□□ -0.35
PTPN20-203ENST00000374342 K7EMT4 169 aa12.85□□□□□ -0.35
PTPN20-203ENST00000374342 HOXA5P20719 270 aa12.85□□□□□ -0.35
PTPN20-203ENST00000374342 SMUG1Q53HV7 270 aa12.85□□□□□ -0.35
PTPN20-203ENST00000374342 SAPCD1Q5SSQ6 148 aa12.85□□□□□ -0.35
PTPN20-203ENST00000374342 WDR73Q6P4I2 378 aa12.85□□□□□ -0.35
PTPN20-203ENST00000374342 Q6ZSV7 163 aa12.85□□□□□ -0.35
PTPN20-203ENST00000374342 NDFIP1Q9BT67 221 aa12.85□□□□□ -0.35
PTPN20-203ENST00000374342 SMPXQ9UHP9 88 aa12.85□□□□□ -0.35
PTPN20-203ENST00000374342 ACANP16112 2415 aa12.85□□□□□ -0.35
PTPN20-203ENST00000374342 XKRY2A2RUG3 117 aa12.84□□□□□ -0.35
PTPN20-203ENST00000374342 GZMBP10144 247 aa12.84□□□□□ -0.35
PTPN20-203ENST00000374342 CRIP1P50238 77 aa12.84□□□□□ -0.35
PTPN20-203ENST00000374342 GFI1BQ5VTD9 330 aa12.84□□□□□ -0.35
PTPN20-203ENST00000374342 GTSF1Q8WW33 167 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms