RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 ZNF575Q86XF7 245 aa9.97□□□□□ -0.81
UBXN11-207ENST00000374223 TMEM252Q8N6L7 170 aa9.97□□□□□ -0.81
UBXN11-207ENST00000374223 RNASE8Q8TDE3 154 aaKnown RBP9.97□□□□□ -0.81
UBXN11-207ENST00000374223 GGACTQ9BVM4 153 aa9.97□□□□□ -0.81
UBXN11-207ENST00000374223 DNAJC4Q9NNZ3 241 aa9.97□□□□□ -0.81
UBXN11-207ENST00000374223 PPP1R14DQ9NXH3 145 aa9.97□□□□□ -0.81
UBXN11-207ENST00000374223 NDUFB4O95168 129 aa9.96□□□□□ -0.82
UBXN11-207ENST00000374223 NUDT3O95989 172 aa9.96□□□□□ -0.82
UBXN11-207ENST00000374223 PYYP10082 97 aa9.96□□□□□ -0.82
UBXN11-207ENST00000374223 CDKN1BP46527 198 aa9.96□□□□□ -0.82
UBXN11-207ENST00000374223 TAS2R60P59551 318 aa9.96□□□□□ -0.82
UBXN11-207ENST00000374223 NHLH2Q02577 135 aa9.96□□□□□ -0.82
UBXN11-207ENST00000374223 BPIFA4PQ86YQ2 179 aa9.96□□□□□ -0.82
UBXN11-207ENST00000374223 RNF141Q8WVD5 230 aa9.96□□□□□ -0.82
UBXN11-207ENST00000374223 UQCC1Q9NVA1 299 aa9.96□□□□□ -0.82
UBXN11-207ENST00000374223 PTTG2Q9NZH5 202 aa9.96□□□□□ -0.82
UBXN11-207ENST00000374223 TRAV12-3A0A0B4J271 114 aa9.95□□□□□ -0.82
UBXN11-207ENST00000374223 HOXA5P20719 270 aa9.95□□□□□ -0.82
UBXN11-207ENST00000374223 S100A7P31151 101 aa9.95□□□□□ -0.82
UBXN11-207ENST00000374223 BAXQ07812 192 aa9.95□□□□□ -0.82
UBXN11-207ENST00000374223 RNF212Q495C1 297 aa9.95□□□□□ -0.82
UBXN11-207ENST00000374223 PXDC1Q5TGL8 231 aa9.95□□□□□ -0.82
UBXN11-207ENST00000374223 ZNRF2Q8NHG8 242 aa9.95□□□□□ -0.82
UBXN11-207ENST00000374223 SLC50A1Q9BRV3 221 aa9.95□□□□□ -0.82
UBXN11-207ENST00000374223 KRTAP4-5Q9BYR2 181 aa9.95□□□□□ -0.82
UBXN11-207ENST00000374223 LYRM2Q9NU23 88 aaPredicted RBP9.95□□□□□ -0.82
UBXN11-207ENST00000374223 SLC39A9Q9NUM3 307 aa9.95□□□□□ -0.82
UBXN11-207ENST00000374223 LINC00588Q9Y4M8 146 aa9.95□□□□□ -0.82
UBXN11-207ENST00000374223 PXMP4Q9Y6I8 212 aa9.95□□□□□ -0.82
UBXN11-207ENST00000374223 H0YIZ8 118 aa9.94□□□□□ -0.82
UBXN11-207ENST00000374223 CXCL2P19875 107 aa9.94□□□□□ -0.82
UBXN11-207ENST00000374223 FGF7P21781 194 aa9.94□□□□□ -0.82
UBXN11-207ENST00000374223 SULT1A1P50225 295 aa9.94□□□□□ -0.82
UBXN11-207ENST00000374223 TNP2Q05952 138 aa9.94□□□□□ -0.82
UBXN11-207ENST00000374223 EXOC3-AS1Q8N2X6 119 aa9.94□□□□□ -0.82
UBXN11-207ENST00000374223 OR5AC2Q9NZP5 309 aa9.94□□□□□ -0.82
UBXN11-207ENST00000374223 FAM240BA0A1B0GVZ2 78 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 GAGE12BA1L429 117 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 CBY3A6NI87 242 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 NPIPB6E9PJ23 425 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 EIF3GO75821 320 aaKnown RBP eCLIP9.93□□□□□ -0.82
UBXN11-207ENST00000374223 GAGE7O76087 117 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 ATP5G1P05496 136 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 GAGE12FP0CL80 117 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 GAGE12GP0CL81 117 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 GAGE12IP0CL82 117 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 RPL29P47914 159 aaKnown RBP9.93□□□□□ -0.82
UBXN11-207ENST00000374223 ATP5G3P48201 142 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 B2MP61769 119 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 CD300CQ08708 224 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 PRR9Q5T870 116 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 TMEM256Q8N2U0 113 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 LINC00612Q8N6U2 182 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 THAP6Q8TBB0 222 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 C16orf74Q96GX8 76 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 TIMM8BQ9Y5J9 83 aaPredicted RBP9.93□□□□□ -0.82
UBXN11-207ENST00000374223 DNAH5Q8TE73 4624 aa9.93□□□□□ -0.82
UBXN11-207ENST00000374223 TRBV19A0A075B6N1 114 aa9.92□□□□□ -0.82
UBXN11-207ENST00000374223 A0A0J9YY99 117 aa9.92□□□□□ -0.82
UBXN11-207ENST00000374223 MIR17HGQ75NE6 70 aa9.92□□□□□ -0.82
UBXN11-207ENST00000374223 OR10J6PQ8NGY7 276 aa9.92□□□□□ -0.82
UBXN11-207ENST00000374223 TMEM263Q8WUH6 116 aaKnown RBP9.92□□□□□ -0.82
UBXN11-207ENST00000374223 BLNKQ8WV28 456 aa9.92□□□□□ -0.82
UBXN11-207ENST00000374223 FAM167A-AS1Q96KT0 104 aa9.92□□□□□ -0.82
UBXN11-207ENST00000374223 CCDC32Q9BV29 185 aa9.92□□□□□ -0.82
UBXN11-207ENST00000374223 SLC25A2Q9BXI2 301 aa9.92□□□□□ -0.82
UBXN11-207ENST00000374223 KRTAP1-5Q9BYS1 174 aa9.92□□□□□ -0.82
UBXN11-207ENST00000374223 GPN1Q9HCN4 374 aaPredicted RBP9.92□□□□□ -0.82
UBXN11-207ENST00000374223 APOBP04114 4563 aaKnown RBP9.92□□□□□ -0.82
UBXN11-207ENST00000374223 H7BYZ3 331 aa9.91□□□□□ -0.82
UBXN11-207ENST00000374223 BTN1A1Q13410 526 aa9.91□□□□□ -0.82
UBXN11-207ENST00000374223 ASAH1Q13510 395 aa9.91□□□□□ -0.82
UBXN11-207ENST00000374223 LRRC37A5PQ49AS3 106 aa9.91□□□□□ -0.82
UBXN11-207ENST00000374223 C1orf134Q5TEV5 83 aa9.91□□□□□ -0.82
UBXN11-207ENST00000374223 Q6ZRG5 221 aa9.91□□□□□ -0.82
UBXN11-207ENST00000374223 Q6ZTI0 123 aa9.91□□□□□ -0.82
UBXN11-207ENST00000374223 C15orf53Q8NAA6 179 aa9.91□□□□□ -0.82
UBXN11-207ENST00000374223 AGPAT4-IT1Q9H0P7 198 aa9.91□□□□□ -0.82
UBXN11-207ENST00000374223 TRAV26-1A0A087WT03 109 aa9.9□□□□□ -0.82
UBXN11-207ENST00000374223 IGKV2-40A0A087WW87 121 aaPredicted RBP9.9□□□□□ -0.82
UBXN11-207ENST00000374223 IGKV2D-40P01614 121 aaPredicted RBP9.9□□□□□ -0.82
UBXN11-207ENST00000374223 S100A11P31949 105 aa9.9□□□□□ -0.82
UBXN11-207ENST00000374223 OR5I1Q13606 314 aa9.9□□□□□ -0.82
UBXN11-207ENST00000374223 OR1L4Q8NGR5 311 aa9.9□□□□□ -0.82
UBXN11-207ENST00000374223 FAM19A4Q96LR4 140 aa9.9□□□□□ -0.82
UBXN11-207ENST00000374223 VGLL1Q99990 258 aa9.9□□□□□ -0.82
UBXN11-207ENST00000374223 ATG101Q9BSB4 218 aa9.9□□□□□ -0.82
UBXN11-207ENST00000374223 NPCDR1Q9BY65 106 aa9.9□□□□□ -0.82
UBXN11-207ENST00000374223 TP53TG3Q9ULZ0 132 aa9.9□□□□□ -0.82
UBXN11-207ENST00000374223 NBDYA0A0U1RRE5 68 aa9.89□□□□□ -0.83
UBXN11-207ENST00000374223 ZNF324O75467 553 aaPredicted RBP9.89□□□□□ -0.83
UBXN11-207ENST00000374223 FAM3BP58499 235 aaPredicted RBP9.89□□□□□ -0.83
UBXN11-207ENST00000374223 CLINT1Q14677 625 aa9.89□□□□□ -0.83
UBXN11-207ENST00000374223 ZNF493Q6ZR52 646 aa9.89□□□□□ -0.83
UBXN11-207ENST00000374223 LINC00299Q6ZSB3 139 aa9.89□□□□□ -0.83
UBXN11-207ENST00000374223 OR5C1Q8NGR4 320 aa9.89□□□□□ -0.83
UBXN11-207ENST00000374223 TMPRSS5Q9H3S3 457 aa9.89□□□□□ -0.83
UBXN11-207ENST00000374223 GSN-AS1Q9NRJ2 163 aa9.89□□□□□ -0.83
UBXN11-207ENST00000374223 KLF12Q9Y4X4 402 aa9.89□□□□□ -0.83
UBXN11-207ENST00000374223 HIST1H1EP10412 219 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms