RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 PRELID1Q9Y255 219 aa8.7□□□□□ -1.02
HDAC8-201ENST00000373554 BORCS7-ASMTA0A0B4J1R7 106 aa8.69□□□□□ -1.02
HDAC8-201ENST00000373554 SMIM9A6NGZ8 99 aa8.69□□□□□ -1.02
HDAC8-201ENST00000373554 ARPC5O15511 151 aa8.69□□□□□ -1.02
HDAC8-201ENST00000373554 NDUFB4O95168 129 aa8.69□□□□□ -1.02
HDAC8-201ENST00000373554 OR10J4P0C629 311 aa8.69□□□□□ -1.02
HDAC8-201ENST00000373554 NBEAP1P0C6P0 100 aa8.69□□□□□ -1.02
HDAC8-201ENST00000373554 RBMY1A1P0DJD3 496 aaKnown RBP8.69□□□□□ -1.02
HDAC8-201ENST00000373554 RBMY1CP0DJD4 496 aa8.69□□□□□ -1.02
HDAC8-201ENST00000373554 PRB4P10163 310 aaPredicted RBP8.69□□□□□ -1.02
HDAC8-201ENST00000373554 RBMY1FQ15415 496 aaKnown RBP8.69□□□□□ -1.02
HDAC8-201ENST00000373554 RNF141Q8WVD5 230 aa8.69□□□□□ -1.02
HDAC8-201ENST00000373554 NEU1Q99519 415 aa8.69□□□□□ -1.02
HDAC8-201ENST00000373554 PSMG3Q9BT73 122 aaPredicted RBP8.69□□□□□ -1.02
HDAC8-201ENST00000373554 DNAH7Q8WXX0 4024 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 TMEM189A5PLL7 270 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 PRAC2D3DTV9 90 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 G3V3Q6 166 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 M0R3E3 92 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 HBE1P02100 147 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 ATP6V0CP27449 155 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 RAB2AP61019 212 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 ICAM4Q14773 271 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 BAP18Q8IXM2 172 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 EXOC3-AS1Q8N2X6 119 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 OR2G3Q8NGZ4 309 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 FXYD5Q96DB9 178 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 RFNGQ9Y644 331 aa8.68□□□□□ -1.02
HDAC8-201ENST00000373554 TRAV12-2A0A075B6T6 113 aa8.67□□□□□ -1.02
HDAC8-201ENST00000373554 CRXO43186 299 aaPredicted RBP8.67□□□□□ -1.02
HDAC8-201ENST00000373554 TSPOP30536 169 aa8.67□□□□□ -1.02
HDAC8-201ENST00000373554 CDKN1BP46527 198 aa8.67□□□□□ -1.02
HDAC8-201ENST00000373554 NANOS2P60321 138 aaKnown RBP8.67□□□□□ -1.02
HDAC8-201ENST00000373554 SERF2P84101 59 aa8.67□□□□□ -1.02
HDAC8-201ENST00000373554 RRN3P1Q2M238 152 aa8.67□□□□□ -1.02
HDAC8-201ENST00000373554 RPL7L1Q6DKI1 246 aaKnown RBP8.67□□□□□ -1.02
HDAC8-201ENST00000373554 FAM122CQ6P4D5 195 aa8.67□□□□□ -1.02
HDAC8-201ENST00000373554 PQLC2Q6ZP29 291 aa8.67□□□□□ -1.02
HDAC8-201ENST00000373554 C1orf158Q8N1D5 194 aa8.67□□□□□ -1.02
HDAC8-201ENST00000373554 OR10G4Q8NGN3 311 aa8.67□□□□□ -1.02
HDAC8-201ENST00000373554 OR10G9Q8NGN4 311 aa8.67□□□□□ -1.02
HDAC8-201ENST00000373554 OR10G7Q8NGN6 311 aa8.67□□□□□ -1.02
HDAC8-201ENST00000373554 PHLDA1Q8WV24 401 aaPredicted RBP8.67□□□□□ -1.02
HDAC8-201ENST00000373554 GNPNAT1Q96EK6 184 aaPredicted RBP8.67□□□□□ -1.02
HDAC8-201ENST00000373554 KLK5Q9Y337 293 aaPredicted RBP8.67□□□□□ -1.02
HDAC8-201ENST00000373554 NPIPB6E9PJ23 425 aa8.66□□□□□ -1.02
HDAC8-201ENST00000373554 SMLR1H3BR10 107 aa8.66□□□□□ -1.02
HDAC8-201ENST00000373554 TAAR5O14804 337 aa8.66□□□□□ -1.02
HDAC8-201ENST00000373554 JTBO76095 146 aa8.66□□□□□ -1.02
HDAC8-201ENST00000373554 MBP02144 154 aa8.66□□□□□ -1.02
HDAC8-201ENST00000373554 CDC34P49427 236 aaPredicted RBP8.66□□□□□ -1.02
HDAC8-201ENST00000373554 EMP1P54849 157 aa8.66□□□□□ -1.02
HDAC8-201ENST00000373554 CEMP1Q6PRD7 247 aaPredicted RBP8.66□□□□□ -1.02
HDAC8-201ENST00000373554 TMEM256Q8N2U0 113 aa8.66□□□□□ -1.02
HDAC8-201ENST00000373554 RPP25LQ8N5L8 163 aaKnown RBP8.66□□□□□ -1.02
HDAC8-201ENST00000373554 ZNF503Q96F45 646 aa8.66□□□□□ -1.02
HDAC8-201ENST00000373554 PHYHIPLQ96FC7 376 aa8.66□□□□□ -1.02
HDAC8-201ENST00000373554 ODF3Q96PU9 254 aa8.66□□□□□ -1.02
HDAC8-201ENST00000373554 SH3BGRL3Q9H299 93 aa8.66□□□□□ -1.02
HDAC8-201ENST00000373554 LOC102723971A0A1B0GUV8 181 aa8.65□□□□□ -1.02
HDAC8-201ENST00000373554 EIF3GO75821 320 aaKnown RBP eCLIP8.65□□□□□ -1.02
HDAC8-201ENST00000373554 LEPP41159 167 aa8.65□□□□□ -1.02
HDAC8-201ENST00000373554 CSN1S1P47710 185 aa8.65□□□□□ -1.02
HDAC8-201ENST00000373554 RANP62826 216 aaKnown RBP8.65□□□□□ -1.02
HDAC8-201ENST00000373554 LYPD1Q8N2G4 141 aa8.65□□□□□ -1.02
HDAC8-201ENST00000373554 C20orf144Q9BQM9 153 aa8.65□□□□□ -1.02
HDAC8-201ENST00000373554 LCE6AA0A183 80 aa8.64□□□□□ -1.03
HDAC8-201ENST00000373554 TEX48A0A1B0GUV7 120 aa8.64□□□□□ -1.03
HDAC8-201ENST00000373554 C11orf94C9JXX5 98 aa8.64□□□□□ -1.03
HDAC8-201ENST00000373554 HMGB3O15347 200 aaKnown RBP8.64□□□□□ -1.03
HDAC8-201ENST00000373554 SPART-AS1P0CW21 52 aa8.64□□□□□ -1.03
HDAC8-201ENST00000373554 ZNF345Q14585 488 aa8.64□□□□□ -1.03
HDAC8-201ENST00000373554 TMEM78Q5T7P6 136 aa8.64□□□□□ -1.03
HDAC8-201ENST00000373554 LINC01587Q99440 93 aa8.64□□□□□ -1.03
HDAC8-201ENST00000373554 Q9H3A6 140 aa8.64□□□□□ -1.03
HDAC8-201ENST00000373554 CELA1Q9UNI1 258 aa8.64□□□□□ -1.03
HDAC8-201ENST00000373554 STARD9Q9P2P6 4700 aa8.63□□□□□ -1.03
HDAC8-201ENST00000373554 IGKV2-40A0A087WW87 121 aaPredicted RBP8.63□□□□□ -1.03
HDAC8-201ENST00000373554 J3KRW8 73 aa8.63□□□□□ -1.03
HDAC8-201ENST00000373554 IGKV2D-40P01614 121 aaPredicted RBP8.63□□□□□ -1.03
HDAC8-201ENST00000373554 STAG3L2P0CL84 134 aa8.63□□□□□ -1.03
HDAC8-201ENST00000373554 STAG3L3P0CL85 134 aa8.63□□□□□ -1.03
HDAC8-201ENST00000373554 ARL14EPLP0DKL9 152 aa8.63□□□□□ -1.03
HDAC8-201ENST00000373554 CT45A10P0DMU9 189 aa8.63□□□□□ -1.03
HDAC8-201ENST00000373554 FAM74A1Q5RGS3 127 aa8.63□□□□□ -1.03
HDAC8-201ENST00000373554 GFI1BQ5VTD9 330 aa8.63□□□□□ -1.03
HDAC8-201ENST00000373554 Q6ZTC4 211 aa8.63□□□□□ -1.03
HDAC8-201ENST00000373554 RAB24Q969Q5 203 aa8.63□□□□□ -1.03
HDAC8-201ENST00000373554 LINC00477Q96M19 166 aa8.63□□□□□ -1.03
HDAC8-201ENST00000373554 ARPC5LQ9BPX5 153 aa8.63□□□□□ -1.03
HDAC8-201ENST00000373554 ACTR3CQ9C0K3 210 aaPredicted RBP8.63□□□□□ -1.03
HDAC8-201ENST00000373554 YTHDF2Q9Y5A9 579 aaKnown RBP8.63□□□□□ -1.03
HDAC8-201ENST00000373554 CSMD3Q7Z407 3707 aa8.63□□□□□ -1.03
HDAC8-201ENST00000373554 TENM2Q9NT68 2774 aa8.62□□□□□ -1.03
HDAC8-201ENST00000373554 HYDINQ4G0P3 5121 aa8.62□□□□□ -1.03
HDAC8-201ENST00000373554 HMSDA8MTL9 139 aa8.62□□□□□ -1.03
HDAC8-201ENST00000373554 ZNF705GA8MUZ8 300 aaPredicted RBP8.62□□□□□ -1.03
HDAC8-201ENST00000373554 H7BYZ3 331 aa8.62□□□□□ -1.03
HDAC8-201ENST00000373554 TAS2R60P59551 318 aa8.62□□□□□ -1.03
HDAC8-201ENST00000373554 ERCC8Q13216 396 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms