RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 IGHV3-49A0A0A0MS15 119 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 GRIFINA4D1Z8 144 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 A8MWL6 223 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 RAB4BP61018 213 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 PYY3Q5JQD4 70 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 C1orf194Q5T5A4 169 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 TCF24Q7RTU0 167 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 WIPF2Q8TF74 440 aaPredicted RBP15.07■□□□□ 0
HDAC1-201ENST00000373548 IGKV2-40A0A087WW87 121 aaPredicted RBP15.07■□□□□ 0
HDAC1-201ENST00000373548 CHEK1O14757 476 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 IGKV2D-40P01614 121 aaPredicted RBP15.07■□□□□ 0
HDAC1-201ENST00000373548 TMEM95Q3KNT9 176 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 C16orf54Q6UWD8 224 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 LCNL1Q6ZST4 164 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 GTSF1Q8WW33 167 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 PACRGQ96M98 296 aaPredicted RBP15.07■□□□□ 0
HDAC1-201ENST00000373548 ZNF580Q9UK33 172 aa15.07■□□□□ 0
HDAC1-201ENST00000373548 NBPF19A0A087WUL8 3843 aa15.06■□□□□ 0
HDAC1-201ENST00000373548 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.06■□□□□ 0
HDAC1-201ENST00000373548 PCP4L1A6NKN8 68 aa15.06■□□□□ 0
HDAC1-201ENST00000373548 IGHV3-11P01762 117 aa15.06■□□□□ 0
HDAC1-201ENST00000373548 HLA-DQA1P01909 254 aa15.06■□□□□ 0
HDAC1-201ENST00000373548 RASL11AQ6T310 242 aa15.06■□□□□ 0
HDAC1-201ENST00000373548 APCP25054 2843 aa15.06■□□□□ 0
HDAC1-201ENST00000373548 C9orf139Q6ZV77 190 aa15.05■□□□□ 0
HDAC1-201ENST00000373548 TMEM256Q8N2U0 113 aa15.05■□□□□ 0
HDAC1-201ENST00000373548 OR4B1Q8NGF8 309 aa15.05■□□□□ 0
HDAC1-201ENST00000373548 C8orf49Q96NF6 230 aa15.05■□□□□ 0
HDAC1-201ENST00000373548 PLA2G2AP14555 144 aa15.05■□□□□ -0
HDAC1-201ENST00000373548 CRISP2P16562 243 aa15.05■□□□□ -0
HDAC1-201ENST00000373548 NIT2Q9NQR4 276 aa15.05■□□□□ -0
HDAC1-201ENST00000373548 TP53TG3Q9ULZ0 132 aa15.05■□□□□ -0
HDAC1-201ENST00000373548 ZNF705FA8MVS1 300 aaPredicted RBP15.04■□□□□ -0
HDAC1-201ENST00000373548 CRIP1P50238 77 aa15.04■□□□□ -0
HDAC1-201ENST00000373548 GDF5OSQ5U4N7 250 aa15.04■□□□□ -0
HDAC1-201ENST00000373548 HIST2H2BCQ6DN03 193 aa15.04■□□□□ -0
HDAC1-201ENST00000373548 PRSS57Q6UWY2 283 aa15.04■□□□□ -0
HDAC1-201ENST00000373548 UNQ9165/PRO28630Q6UXU0 137 aa15.04■□□□□ -0
HDAC1-201ENST00000373548 OR5R1Q8NH85 324 aa15.04■□□□□ -0
HDAC1-201ENST00000373548 GFRA4Q9GZZ7 299 aa15.04■□□□□ -0
HDAC1-201ENST00000373548 CREBBPQ92793 2442 aa15.04■□□□□ -0
HDAC1-201ENST00000373548 KIAA1644Q3SXP7 199 aa15.04■□□□□ -0
HDAC1-201ENST00000373548 OR4X2Q8NGF9 303 aa15.04■□□□□ -0
HDAC1-201ENST00000373548 OR2D3Q8NGH3 330 aa15.04■□□□□ -0
HDAC1-201ENST00000373548 A0A1B0GXF2 115 aa15.03■□□□□ -0
HDAC1-201ENST00000373548 NDUFA4O00483 81 aa15.03■□□□□ -0
HDAC1-201ENST00000373548 NUPR1O60356 82 aa15.03■□□□□ -0
HDAC1-201ENST00000373548 LCN12Q6JVE5 192 aa15.03■□□□□ -0
HDAC1-201ENST00000373548 ATP5L2Q7Z4Y8 100 aa15.03■□□□□ -0
HDAC1-201ENST00000373548 VGLL1Q99990 258 aa15.03■□□□□ -0
HDAC1-201ENST00000373548 GZMBP10144 247 aa15.02■□□□□ -0
HDAC1-201ENST00000373548 Q6YL49 198 aa15.02■□□□□ -0
HDAC1-201ENST00000373548 SLC50A1Q9BRV3 221 aa15.02■□□□□ -0
HDAC1-201ENST00000373548 VPREB3Q9UKI3 123 aa15.02■□□□□ -0
HDAC1-201ENST00000373548 A0A0G2JLM5 398 aa15.02□□□□□ -0.01
HDAC1-201ENST00000373548 FAM231BA6NCW3 169 aa15.02□□□□□ -0.01
HDAC1-201ENST00000373548 SLAQ13239 276 aa15.02□□□□□ -0.01
HDAC1-201ENST00000373548 RNF182Q8N6D2 247 aa15.02□□□□□ -0.01
HDAC1-201ENST00000373548 PGLYRP4Q96LB8 373 aa15.02□□□□□ -0.01
HDAC1-201ENST00000373548 FBLL1A6NHQ2 334 aaKnown RBP15.01□□□□□ -0.01
HDAC1-201ENST00000373548 APCSP02743 223 aa15.01□□□□□ -0.01
HDAC1-201ENST00000373548 LINC00310P59036 64 aa15.01□□□□□ -0.01
HDAC1-201ENST00000373548 CYB5R2Q6BCY4 276 aa15.01□□□□□ -0.01
HDAC1-201ENST00000373548 RBPMS2Q6ZRY4 209 aaKnown RBP15.01□□□□□ -0.01
HDAC1-201ENST00000373548 J3QKU1 62 aa15.01□□□□□ -0.01
HDAC1-201ENST00000373548 Q0VG73 95 aa15.01□□□□□ -0.01
HDAC1-201ENST00000373548 COX8CQ7Z4L0 72 aa15.01□□□□□ -0.01
HDAC1-201ENST00000373548 Q8TAT8 98 aa15.01□□□□□ -0.01
HDAC1-201ENST00000373548 GLMPQ8WWB7 406 aa15.01□□□□□ -0.01
HDAC1-201ENST00000373548 TMEM18Q96B42 140 aa15.01□□□□□ -0.01
HDAC1-201ENST00000373548 PRR25Q96S07 402 aa15.01□□□□□ -0.01
HDAC1-201ENST00000373548 TRAV8-2A0A0B4J237 113 aa15□□□□□ -0.01
HDAC1-201ENST00000373548 PRAC2D3DTV9 90 aa15□□□□□ -0.01
HDAC1-201ENST00000373548 F2Z2F3 143 aa15□□□□□ -0.01
HDAC1-201ENST00000373548 CT45A10P0DMU9 189 aa15□□□□□ -0.01
HDAC1-201ENST00000373548 CAMPP49913 170 aa15□□□□□ -0.01
HDAC1-201ENST00000373548 SAPCD1Q5SSQ6 148 aa15□□□□□ -0.01
HDAC1-201ENST00000373548 CDPF1Q6NVV7 123 aa15□□□□□ -0.01
HDAC1-201ENST00000373548 PSMB8P28062 276 aa14.99□□□□□ -0.01
HDAC1-201ENST00000373548 C8orf86Q6ZUL3 223 aa14.99□□□□□ -0.01
HDAC1-201ENST00000373548 PSMG3-AS1Q96PY0 264 aa14.99□□□□□ -0.01
HDAC1-201ENST00000373548 SMAD7O15105 426 aaKnown RBP14.99□□□□□ -0.01
HDAC1-201ENST00000373548 HBBP68871 147 aa14.99□□□□□ -0.01
HDAC1-201ENST00000373548 SERF1AO75920 110 aa14.98□□□□□ -0.01
HDAC1-201ENST00000373548 SRIP30626 198 aa14.98□□□□□ -0.01
HDAC1-201ENST00000373548 C10orf99Q6UWK7 81 aa14.98□□□□□ -0.01
HDAC1-201ENST00000373548 SSBP4Q9BWG4 385 aaPredicted RBP14.98□□□□□ -0.01
HDAC1-201ENST00000373548 FOXA3P55318 350 aaPredicted RBP14.98□□□□□ -0.01
HDAC1-201ENST00000373548 FAM209BQ5JX69 171 aa14.98□□□□□ -0.01
HDAC1-201ENST00000373548 BAGE3Q86Y29 109 aa14.98□□□□□ -0.01
HDAC1-201ENST00000373548 HOXA3O43365 443 aaPredicted RBP14.97□□□□□ -0.01
HDAC1-201ENST00000373548 SH2D1AO60880 128 aa14.97□□□□□ -0.01
HDAC1-201ENST00000373548 ESDP10768 282 aa14.97□□□□□ -0.01
HDAC1-201ENST00000373548 ERCC8Q13216 396 aa14.97□□□□□ -0.01
HDAC1-201ENST00000373548 WFDC11Q8NEX6 87 aa14.97□□□□□ -0.01
HDAC1-201ENST00000373548 NPFFR1Q9GZQ6 430 aa14.97□□□□□ -0.01
HDAC1-201ENST00000373548 PRDM13Q9H4Q3 707 aa14.97□□□□□ -0.01
HDAC1-201ENST00000373548 TEX15Q9BXT5 2789 aa14.97□□□□□ -0.01
HDAC1-201ENST00000373548 RBAKDNA6NC62 111 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms