RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 SRSF12Q8WXF0 261 aaKnown RBP7.58□□□□□ -1.2
SF3A3-201ENST00000373019 RPEQ96AT9 228 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 IGKCP01834 107 aa7.57□□□□□ -1.2
SF3A3-201ENST00000373019 IGHG4P01861 327 aa7.57□□□□□ -1.2
SF3A3-201ENST00000373019 ZNF826PQ6ZT77 177 aa7.57□□□□□ -1.2
SF3A3-201ENST00000373019 Q86TA4 180 aa7.57□□□□□ -1.2
SF3A3-201ENST00000373019 RAB1BQ9H0U4 201 aa7.57□□□□□ -1.2
SF3A3-201ENST00000373019 H3BTX0 84 aa7.57□□□□□ -1.2
SF3A3-201ENST00000373019 GRPP07492 148 aa7.57□□□□□ -1.2
SF3A3-201ENST00000373019 PSMG4Q5JS54 123 aa7.57□□□□□ -1.2
SF3A3-201ENST00000373019 FAM159AQ6UWV7 190 aa7.57□□□□□ -1.2
SF3A3-201ENST00000373019 LOXL3P58215 753 aa7.57□□□□□ -1.2
SF3A3-201ENST00000373019 FAM104BQ5XKR9 115 aa7.57□□□□□ -1.2
SF3A3-201ENST00000373019 CXorf67Q86X51 503 aaPredicted RBP7.57□□□□□ -1.2
SF3A3-201ENST00000373019 C11orf53Q8IXP5 236 aa7.57□□□□□ -1.2
SF3A3-201ENST00000373019 HIST1H4GQ99525 98 aa7.57□□□□□ -1.2
SF3A3-201ENST00000373019 AKIRIN1Q9H9L7 192 aaPredicted RBP7.57□□□□□ -1.2
SF3A3-201ENST00000373019 TMEM213A2RRL7 107 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 NTN3O00634 580 aaPredicted RBP7.56□□□□□ -1.2
SF3A3-201ENST00000373019 NPYP01303 97 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 SBSPONQ8IVN8 264 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 ORMDL3Q8N138 153 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 ASCL2Q99929 193 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 SPRY4Q9C004 299 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 SPINT2O43291 252 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 MRPL33O75394 65 aaKnown RBP7.56□□□□□ -1.2
SF3A3-201ENST00000373019 SCRG1O75711 98 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 RFPL3SP0C7P2 107 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 IL11RAQ14626 422 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 MRPL51Q4U2R6 128 aaKnown RBP7.56□□□□□ -1.2
SF3A3-201ENST00000373019 OR1L4Q8NGR5 311 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 RAXQ9Y2V3 346 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 MSRB2Q9Y3D2 182 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 LAMA5O15230 3695 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 AKAP6Q13023 2319 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 LY6G6EA0A0G2JKS1 128 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 TMEM8BA6NDV4 472 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 SMKR1H3BMG3 65 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 HOXA3O43365 443 aaPredicted RBP7.56□□□□□ -1.2
SF3A3-201ENST00000373019 IGHV3-48P01763 117 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 PSMB2P49721 201 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 CRIP1P50238 77 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 OR1L8Q8NGR8 309 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 FLYWCH2Q96CP2 140 aaKnown RBP7.56□□□□□ -1.2
SF3A3-201ENST00000373019 VCX2Q9H322 139 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 FBXL15Q9H469 300 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 MRPL36Q9P0J6 103 aaKnown RBP7.56□□□□□ -1.2
SF3A3-201ENST00000373019 GNG12Q9UBI6 72 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 U3KQA8 63 aa7.56□□□□□ -1.2
SF3A3-201ENST00000373019 IFITM1P13164 125 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 UBE2D3P61077 147 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 UBE2D2P62837 147 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 GAGE2BQ13066 116 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 GAGE2EQ4V326 116 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 RUSC1-AS1Q66K80 236 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 SFTA2Q6UW10 78 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 RPS19BP1Q86WX3 136 aaKnown RBP7.55□□□□□ -1.2
SF3A3-201ENST00000373019 Q9H3A6 140 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 GAGE2DQ9UEU5 116 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 POLEQ07864 2286 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 TRAV40A0A0B4J280 105 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 HOXB4P17483 251 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-201ENST00000373019 FCER1GP30273 86 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 KIR2DS2P43631 304 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 PTPN13Q12923 2485 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 NAV3Q8IVL0 2385 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 GP9P14770 177 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 PRNTQ86SH4 94 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 PPP1R35Q8TAP8 253 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 PRR7Q8TB68 274 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 RASL10AQ92737 203 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 LEAP2Q969E1 77 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 TPPP3Q9BW30 176 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 MAP1LC3AQ9H492 121 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 CHD6Q8TD26 2715 aa7.55□□□□□ -1.2
SF3A3-201ENST00000373019 LINC01546A6NGU7 62 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 POU2AF1Q16633 256 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 Q6ZQT7 251 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 ZZEF1O43149 2961 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 E7EUB6 86 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 PCOLCEQ15113 449 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 ANKRD29Q8N6D5 301 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 NPIPB3Q92617 1050 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 FAM173AQ9BQD7 235 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 TMSB15BA0A087X1C1 80 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 TMEM262E9PQX1 116 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 UPK2O00526 184 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 GAS8-AS1O95177 125 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 IL4P05112 153 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 C6orf15Q6UXA7 325 aaPredicted RBP7.54□□□□□ -1.2
SF3A3-201ENST00000373019 ZFHX4Q86UP3 3567 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 ARFGEF3Q5TH69 2177 aa7.54□□□□□ -1.2
SF3A3-201ENST00000373019 BOD1L1Q8NFC6 3051 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 A4D1N5 150 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 LINC01549A6NIU2 74 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 DPM2O94777 84 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 IGKV1-16P04430 117 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 PRSS1P07477 247 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 SAA2P0DJI9 122 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-201ENST00000373019 TUSC5Q8IXB3 177 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms