RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 RPL27AP46776 148 aaKnown RBP12.52□□□□□ -0.4
PABPC4-202ENST00000372857 FXYD2P54710 66 aa12.52□□□□□ -0.4
PABPC4-202ENST00000372857 TMEM30BQ3MIR4 351 aa12.52□□□□□ -0.4
PABPC4-202ENST00000372857 TMEM133Q9H2Q1 129 aa12.52□□□□□ -0.4
PABPC4-202ENST00000372857 SPTAN1Q13813 2472 aaKnown RBP12.52□□□□□ -0.4
PABPC4-202ENST00000372857 CRYBA4P53673 196 aa12.52□□□□□ -0.41
PABPC4-202ENST00000372857 PIP4P1Q86T03 277 aa12.52□□□□□ -0.41
PABPC4-202ENST00000372857 FAM215AQ9Y5M1 114 aa12.52□□□□□ -0.41
PABPC4-202ENST00000372857 COL6A6A6NMZ7 2263 aa12.52□□□□□ -0.41
PABPC4-202ENST00000372857 HOXB4P17483 251 aaPredicted RBP12.51□□□□□ -0.41
PABPC4-202ENST00000372857 ORMDL3Q8N138 153 aa12.51□□□□□ -0.41
PABPC4-202ENST00000372857 SMIM13P0DJ93 91 aa12.51□□□□□ -0.41
PABPC4-202ENST00000372857 COL25A1Q9BXS0 654 aaPredicted RBP12.51□□□□□ -0.41
PABPC4-202ENST00000372857 DCHS2Q6V1P9 2916 aa12.51□□□□□ -0.41
PABPC4-202ENST00000372857 IGKV2D-26A0A0A0MRZ7 120 aa12.51□□□□□ -0.41
PABPC4-202ENST00000372857 MRPL51Q4U2R6 128 aaKnown RBP12.51□□□□□ -0.41
PABPC4-202ENST00000372857 BCL6BQ8N143 479 aaPredicted RBP12.51□□□□□ -0.41
PABPC4-202ENST00000372857 SIVA1O15304 175 aa12.5□□□□□ -0.41
PABPC4-202ENST00000372857 NDUFS7O75251 213 aa12.5□□□□□ -0.41
PABPC4-202ENST00000372857 NPYP01303 97 aa12.5□□□□□ -0.41
PABPC4-202ENST00000372857 SMIM17P0DL12 118 aa12.5□□□□□ -0.41
PABPC4-202ENST00000372857 PSG3Q16557 428 aa12.5□□□□□ -0.41
PABPC4-202ENST00000372857 FAM104BQ5XKR9 115 aa12.5□□□□□ -0.41
PABPC4-202ENST00000372857 GATD1Q8NB37 220 aa12.5□□□□□ -0.41
PABPC4-202ENST00000372857 MALRD1Q5VYJ5 2156 aa12.5□□□□□ -0.41
PABPC4-202ENST00000372857 RAB9AP51151 201 aa12.5□□□□□ -0.41
PABPC4-202ENST00000372857 ATP6V0BQ99437 205 aa12.5□□□□□ -0.41
PABPC4-202ENST00000372857 TRBV19A0A075B6N1 114 aa12.49□□□□□ -0.41
PABPC4-202ENST00000372857 TMEM75Q8N9X5 138 aa12.49□□□□□ -0.41
PABPC4-202ENST00000372857 ZNF48Q96MX3 618 aaPredicted RBP12.49□□□□□ -0.41
PABPC4-202ENST00000372857 RASL11BQ9BPW5 248 aa12.49□□□□□ -0.41
PABPC4-202ENST00000372857 NGBQ9NPG2 151 aa12.49□□□□□ -0.41
PABPC4-202ENST00000372857 A0A1B0GW15 77 aa12.49□□□□□ -0.41
PABPC4-202ENST00000372857 CT45A10P0DMU9 189 aa12.49□□□□□ -0.41
PABPC4-202ENST00000372857 CKS2P33552 79 aa12.48□□□□□ -0.41
PABPC4-202ENST00000372857 TEX36Q5VZQ5 186 aa12.48□□□□□ -0.41
PABPC4-202ENST00000372857 LYPD2Q6UXB3 125 aa12.48□□□□□ -0.41
PABPC4-202ENST00000372857 ZNF493Q6ZR52 646 aa12.48□□□□□ -0.41
PABPC4-202ENST00000372857 TMEM14CQ9P0S9 112 aa12.48□□□□□ -0.41
PABPC4-202ENST00000372857 K7EQM0 130 aa12.48□□□□□ -0.41
PABPC4-202ENST00000372857 SIGLEC15Q6ZMC9 328 aa12.48□□□□□ -0.41
PABPC4-202ENST00000372857 FAM169BQ8N8A8 192 aa12.48□□□□□ -0.41
PABPC4-202ENST00000372857 PPIAL4EA0A075B759 164 aa12.48□□□□□ -0.41
PABPC4-202ENST00000372857 TMEM189A5PLL7 270 aa12.48□□□□□ -0.41
PABPC4-202ENST00000372857 PPIAL4FP0DN26 164 aa12.48□□□□□ -0.41
PABPC4-202ENST00000372857 SCGB1A1P11684 91 aa12.48□□□□□ -0.41
PABPC4-202ENST00000372857 SHISA2Q6UWI4 295 aa12.48□□□□□ -0.41
PABPC4-202ENST00000372857 SPTBN1Q01082 2364 aaKnown RBP12.47□□□□□ -0.41
PABPC4-202ENST00000372857 NHP2Q9NX24 153 aaKnown RBP12.47□□□□□ -0.41
PABPC4-202ENST00000372857 TSSC4Q9Y5U2 329 aaPredicted RBP12.47□□□□□ -0.41
PABPC4-202ENST00000372857 S4R3C0 116 aa12.47□□□□□ -0.41
PABPC4-202ENST00000372857 PAX8Q06710 450 aa12.47□□□□□ -0.41
PABPC4-202ENST00000372857 Q6AWC8 147 aa12.47□□□□□ -0.41
PABPC4-202ENST00000372857 SMPXQ9UHP9 88 aa12.47□□□□□ -0.41
PABPC4-202ENST00000372857 U3KQK5 164 aa12.47□□□□□ -0.41
PABPC4-202ENST00000372857 CHD8Q9HCK8 2581 aa12.46□□□□□ -0.41
PABPC4-202ENST00000372857 SCNM1Q9BWG6 230 aa12.46□□□□□ -0.41
PABPC4-202ENST00000372857 RALYQ9UKM9 306 aaKnown RBP12.46□□□□□ -0.41
PABPC4-202ENST00000372857 WI2-2373I1.2A0A1W2PRP0 233 aa12.46□□□□□ -0.41
PABPC4-202ENST00000372857 IGKV1-17P01599 117 aa12.46□□□□□ -0.41
PABPC4-202ENST00000372857 TWIST1Q15672 202 aa12.46□□□□□ -0.41
PABPC4-202ENST00000372857 IGFL2Q6UWQ7 119 aa12.46□□□□□ -0.41
PABPC4-202ENST00000372857 CHAC1Q9BUX1 264 aa12.46□□□□□ -0.41
PABPC4-202ENST00000372857 SH2D1AO60880 128 aa12.46□□□□□ -0.42
PABPC4-202ENST00000372857 GAS8-AS1O95177 125 aa12.46□□□□□ -0.42
PABPC4-202ENST00000372857 CCL17Q92583 94 aa12.46□□□□□ -0.42
PABPC4-202ENST00000372857 SPTBN4Q9H254 2564 aa12.45□□□□□ -0.42
PABPC4-202ENST00000372857 CACNA1BQ00975 2339 aa12.45□□□□□ -0.42
PABPC4-202ENST00000372857 TRBV6-1A0A0K0K1D8 114 aa12.45□□□□□ -0.42
PABPC4-202ENST00000372857 GAGE12HA6NDE8 117 aa12.45□□□□□ -0.42
PABPC4-202ENST00000372857 WFDC2Q14508 124 aa12.45□□□□□ -0.42
PABPC4-202ENST00000372857 PVRIGQ6DKI7 326 aa12.45□□□□□ -0.42
PABPC4-202ENST00000372857 MTURNQ8N3F0 131 aa12.45□□□□□ -0.42
PABPC4-202ENST00000372857 NCOR2Q9Y618 2525 aa12.45□□□□□ -0.42
PABPC4-202ENST00000372857 GTSCR1Q86UQ5 136 aa12.45□□□□□ -0.42
PABPC4-202ENST00000372857 VGLL1Q99990 258 aa12.45□□□□□ -0.42
PABPC4-202ENST00000372857 FBXL15Q9H469 300 aa12.45□□□□□ -0.42
PABPC4-202ENST00000372857 SIGLEC9Q9Y336 463 aa12.45□□□□□ -0.42
PABPC4-202ENST00000372857 PTPRQQ9UMZ3 2332 aa12.44□□□□□ -0.42
PABPC4-202ENST00000372857 TEX22C9J3V5 150 aa12.44□□□□□ -0.42
PABPC4-202ENST00000372857 CKS1BP61024 79 aa12.44□□□□□ -0.42
PABPC4-202ENST00000372857 SHANK2-AS3Q9BTD1 123 aa12.44□□□□□ -0.42
PABPC4-202ENST00000372857 PRSS1P07477 247 aa12.44□□□□□ -0.42
PABPC4-202ENST00000372857 MSRB1Q9NZV6 116 aa12.44□□□□□ -0.42
PABPC4-202ENST00000372857 MAP1AP78559 2803 aaPredicted RBP12.44□□□□□ -0.42
PABPC4-202ENST00000372857 IGKV2-40A0A087WW87 121 aaPredicted RBP12.43□□□□□ -0.42
PABPC4-202ENST00000372857 IGKV2D-40P01614 121 aaPredicted RBP12.43□□□□□ -0.42
PABPC4-202ENST00000372857 IL4P05112 153 aa12.43□□□□□ -0.42
PABPC4-202ENST00000372857 CD300EQ496F6 205 aaPredicted RBP12.43□□□□□ -0.42
PABPC4-202ENST00000372857 C1orf122Q6ZSJ8 110 aa12.43□□□□□ -0.42
PABPC4-202ENST00000372857 AGRNO00468 2067 aa12.43□□□□□ -0.42
PABPC4-202ENST00000372857 MBD3L4A6NDZ8 208 aaPredicted RBP12.43□□□□□ -0.42
PABPC4-202ENST00000372857 MBD3L3A6NE82 208 aaPredicted RBP12.43□□□□□ -0.42
PABPC4-202ENST00000372857 MBD3L5A6NJ08 208 aaPredicted RBP12.43□□□□□ -0.42
PABPC4-202ENST00000372857 I3L2K1 104 aa12.43□□□□□ -0.42
PABPC4-202ENST00000372857 NDUFB3O43676 98 aa12.43□□□□□ -0.42
PABPC4-202ENST00000372857 EVI2AP22794 236 aa12.43□□□□□ -0.42
PABPC4-202ENST00000372857 LEPP41159 167 aa12.43□□□□□ -0.42
PABPC4-202ENST00000372857 PRR30Q53SZ7 412 aaPredicted RBP12.43□□□□□ -0.42
PABPC4-202ENST00000372857 MBD3L2Q8NHZ7 208 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms