RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 hADV29S1A0JD25 119 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 H3BMM0 161 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 ANGP03950 147 aaKnown RBP7.88□□□□□ -1.15
COL4A6-202ENST00000372216 RASL11AQ6T310 242 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 UBE2WQ96B02 151 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 NRN1Q9NPD7 142 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 KLF12Q9Y4X4 402 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 LGALS1P09382 135 aaKnown RBP7.88□□□□□ -1.15
COL4A6-202ENST00000372216 TMEM14EPQ6UXP3 125 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 NEGR1Q7Z3B1 354 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 PRSS29PA6NIE9 313 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 TNFRSF6BO95407 300 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 PSG3Q16557 428 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 WDR86Q86TI4 376 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 LINC00518Q8N0U6 118 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 RFNGQ9Y644 331 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 TRAV26-2A0A0B4J265 109 aa7.87□□□□□ -1.15
COL4A6-202ENST00000372216 HAPLN4Q86UW8 402 aa7.87□□□□□ -1.15
COL4A6-202ENST00000372216 IGLV1-44P01699 117 aa7.87□□□□□ -1.15
COL4A6-202ENST00000372216 MST1LQ2TV78 715 aa7.87□□□□□ -1.15
COL4A6-202ENST00000372216 ZNF833PQ6ZTB9 187 aa7.87□□□□□ -1.15
COL4A6-202ENST00000372216 GRNP28799 593 aaKnown RBP7.87□□□□□ -1.15
COL4A6-202ENST00000372216 A0A1W2PPI3 338 aa7.87□□□□□ -1.15
COL4A6-202ENST00000372216 C17orf58Q2M2W7 97 aa7.87□□□□□ -1.15
COL4A6-202ENST00000372216 ASPHD1Q5U4P2 390 aa7.87□□□□□ -1.15
COL4A6-202ENST00000372216 C15orf62A8K5M9 175 aa7.87□□□□□ -1.15
COL4A6-202ENST00000372216 KLF5Q13887 457 aaPredicted RBP7.87□□□□□ -1.15
COL4A6-202ENST00000372216 TEX36Q5VZQ5 186 aa7.87□□□□□ -1.15
COL4A6-202ENST00000372216 CACNA1EQ15878 2313 aa7.87□□□□□ -1.15
COL4A6-202ENST00000372216 LOXP28300 417 aaPredicted RBP7.87□□□□□ -1.15
COL4A6-202ENST00000372216 ZNRF2Q8NHG8 242 aa7.87□□□□□ -1.15
COL4A6-202ENST00000372216 ZNF524Q96C55 264 aa7.87□□□□□ -1.15
COL4A6-202ENST00000372216 A0A0G2JRQ6 117 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 IGHV3-30P01768 117 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 IGHV3-33P01772 117 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 PPBPP02775 128 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 IGHV3-30-3P0DP02 117 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 IGHV3-30-5P0DP03 117 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 FREM3P0C091 2139 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 TRBV25-1A0A075B6N4 114 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 TIMM21Q9BVV7 248 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 TMEM190Q8WZ59 177 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 IFI27L1Q96BM0 104 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 SDK2Q58EX2 2172 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 IGHV4-28A0A0C4DH34 117 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 TCTEX1D4Q5JR98 221 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 AGMATQ9BSE5 352 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 hDV102S1A0JD36 115 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 NDUFB8O95169 186 aa7.86□□□□□ -1.15
COL4A6-202ENST00000372216 SHISA9B4DS77 424 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 LMO1P25800 156 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 SLX1AQ9BQ83 275 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 YLPM1P49750 1951 aaKnown RBP7.85□□□□□ -1.15
COL4A6-202ENST00000372216 F8W735 103 aaPredicted RBP7.85□□□□□ -1.15
COL4A6-202ENST00000372216 CD5LO43866 347 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 TMEM158Q8WZ71 300 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 HELZP42694 1942 aaKnown RBP7.85□□□□□ -1.15
COL4A6-202ENST00000372216 TMEM238C9JI98 176 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 C2orf82Q6UX34 121 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 NOP10Q9NPE3 64 aaKnown RBP7.85□□□□□ -1.15
COL4A6-202ENST00000372216 SCRT2Q9NQ03 307 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 CYTL1Q9NRR1 136 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 KIF26BQ2KJY2 2108 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 TMEM170AQ8WVE7 144 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 GNB1LQ9BYB4 327 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 IGKV1-6A0A0C4DH72 117 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 LRCOL1A6NCL2 159 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 DEFB4AO15263 64 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 TMEM242Q9NWH2 141 aa7.85□□□□□ -1.15
COL4A6-202ENST00000372216 A8MWV9 139 aa7.84□□□□□ -1.15
COL4A6-202ENST00000372216 SHANK2-AS3Q9BTD1 123 aa7.84□□□□□ -1.15
COL4A6-202ENST00000372216 FGF16O43320 207 aa7.84□□□□□ -1.15
COL4A6-202ENST00000372216 XCL1P47992 114 aa7.84□□□□□ -1.15
COL4A6-202ENST00000372216 IGF2-ASQ6U949 168 aa7.84□□□□□ -1.15
COL4A6-202ENST00000372216 DEFB113Q30KQ7 82 aa7.84□□□□□ -1.15
COL4A6-202ENST00000372216 SAMD5Q5TGI4 173 aa7.84□□□□□ -1.15
COL4A6-202ENST00000372216 APRG1Q8IVJ8 170 aa7.84□□□□□ -1.15
COL4A6-202ENST00000372216 IGLV3-9A0A075B6K5 115 aa7.84□□□□□ -1.15
COL4A6-202ENST00000372216 HOXB4P17483 251 aaPredicted RBP7.84□□□□□ -1.15
COL4A6-202ENST00000372216 LYPD1Q8N2G4 141 aa7.84□□□□□ -1.15
COL4A6-202ENST00000372216 RPP25LQ8N5L8 163 aaKnown RBP7.83□□□□□ -1.16
COL4A6-202ENST00000372216 APC2O95996 2303 aa7.83□□□□□ -1.16
COL4A6-202ENST00000372216 VCYO14598 125 aa7.83□□□□□ -1.16
COL4A6-202ENST00000372216 Q6ZRM9 215 aa7.83□□□□□ -1.16
COL4A6-202ENST00000372216 RS1O15537 224 aa7.83□□□□□ -1.16
COL4A6-202ENST00000372216 AMN1Q8IY45 258 aa7.83□□□□□ -1.16
COL4A6-202ENST00000372216 ZNF479Q96JC4 524 aa7.83□□□□□ -1.16
COL4A6-202ENST00000372216 KIF26AQ9ULI4 1882 aaPredicted RBP7.82□□□□□ -1.16
COL4A6-202ENST00000372216 CHCHD1Q96BP2 118 aaKnown RBP7.82□□□□□ -1.16
COL4A6-202ENST00000372216 SMIM2Q9BVW6 85 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 NDUFA4L2Q9NRX3 87 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 IGHV2-5P01817 119 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 ATRAIDQ6UW56 229 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 FER1L5A0AVI2 2057 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 IGLV10-54A0A075B6I4 117 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 FNDC10F2Z333 226 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 NDUFS7O75251 213 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 TMEM14BQ9NUH8 114 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 PLXND1Q9Y4D7 1925 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 SPINK8P0C7L1 97 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms