RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 FAM208BQ5VWN6 2430 aa12.56□□□□□ -0.4
GTF3C4-201ENST00000372146 PRSS29PA6NIE9 313 aa12.56□□□□□ -0.4
GTF3C4-201ENST00000372146 M0R1W7 72 aa12.56□□□□□ -0.4
GTF3C4-201ENST00000372146 ACYP1P07311 99 aa12.56□□□□□ -0.4
GTF3C4-201ENST00000372146 PKIGQ9Y2B9 76 aa12.56□□□□□ -0.4
GTF3C4-201ENST00000372146 NDPQ00604 133 aa12.56□□□□□ -0.4
GTF3C4-201ENST00000372146 RPP25Q9BUL9 199 aaKnown RBP12.56□□□□□ -0.4
GTF3C4-201ENST00000372146 LINC00527Q9UJ94 153 aa12.56□□□□□ -0.4
GTF3C4-201ENST00000372146 RPP25LQ8N5L8 163 aaKnown RBP12.56□□□□□ -0.4
GTF3C4-201ENST00000372146 CYTL1Q9NRR1 136 aa12.56□□□□□ -0.4
GTF3C4-201ENST00000372146 ITGBL1O95965 494 aaPredicted RBP12.55□□□□□ -0.4
GTF3C4-201ENST00000372146 CSPG4Q6UVK1 2322 aa12.55□□□□□ -0.4
GTF3C4-201ENST00000372146 IGLL1P15814 213 aa12.55□□□□□ -0.4
GTF3C4-201ENST00000372146 Q6ZT83 130 aa12.55□□□□□ -0.4
GTF3C4-201ENST00000372146 LILRA1O75019 489 aa12.55□□□□□ -0.4
GTF3C4-201ENST00000372146 RNASE2P10153 161 aaKnown RBP12.55□□□□□ -0.4
GTF3C4-201ENST00000372146 DEFB105AQ8NG35 78 aa12.55□□□□□ -0.4
GTF3C4-201ENST00000372146 BAALC-AS2P0C853 105 aa12.54□□□□□ -0.4
GTF3C4-201ENST00000372146 NTN5Q8WTR8 489 aaPredicted RBP12.54□□□□□ -0.4
GTF3C4-201ENST00000372146 ALPK3Q96L96 1907 aa12.54□□□□□ -0.4
GTF3C4-201ENST00000372146 IGKV3D-7A0A0C4DH55 119 aa12.54□□□□□ -0.4
GTF3C4-201ENST00000372146 TEX48A0A1B0GUV7 120 aa12.54□□□□□ -0.4
GTF3C4-201ENST00000372146 TRPT1Q86TN4 253 aaKnown RBP12.54□□□□□ -0.4
GTF3C4-201ENST00000372146 RHODO00212 210 aa12.54□□□□□ -0.4
GTF3C4-201ENST00000372146 PSMB8P28062 276 aa12.54□□□□□ -0.4
GTF3C4-201ENST00000372146 SH2D6Q7Z4S9 175 aa12.54□□□□□ -0.4
GTF3C4-201ENST00000372146 ARMS2P0C7Q2 107 aa12.54□□□□□ -0.4
GTF3C4-201ENST00000372146 FAM90A1Q86YD7 464 aa12.54□□□□□ -0.4
GTF3C4-201ENST00000372146 RPL35AP18077 110 aaKnown RBP12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 CELA3BP08861 270 aa12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 KLF5Q13887 457 aaPredicted RBP12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 A0A0A6YYD4 124 aa12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 WISP3O95389 354 aaPredicted RBP12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 TRAV26-1A0A087WT03 109 aa12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 MP68P56378 58 aa12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 MDS2Q8NDY4 140 aa12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 TRGV9Q99603 122 aa12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 I3L3M4 83 aa12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 TIMM23O14925 209 aa12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 HGFACQ04756 655 aa12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 C12orf74Q32Q52 190 aa12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 HLA-DRB4P13762 266 aa12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 HLA-DRB4X5D2U9 266 aa12.53□□□□□ -0.4
GTF3C4-201ENST00000372146 SPSB3Q6PJ21 355 aa12.52□□□□□ -0.4
GTF3C4-201ENST00000372146 CXCL10P02778 98 aa12.52□□□□□ -0.4
GTF3C4-201ENST00000372146 CRYGCP07315 174 aa12.52□□□□□ -0.4
GTF3C4-201ENST00000372146 ID3Q02535 119 aa12.52□□□□□ -0.41
GTF3C4-201ENST00000372146 IGHV4-28A0A0C4DH34 117 aa12.52□□□□□ -0.41
GTF3C4-201ENST00000372146 C8orf49Q96NF6 230 aa12.52□□□□□ -0.41
GTF3C4-201ENST00000372146 SEC61GP60059 68 aa12.52□□□□□ -0.41
GTF3C4-201ENST00000372146 FAM168AQ92567 244 aa12.52□□□□□ -0.41
GTF3C4-201ENST00000372146 LINC00477Q96M19 166 aa12.52□□□□□ -0.41
GTF3C4-201ENST00000372146 IL17RELQ6ZVW7 336 aa12.52□□□□□ -0.41
GTF3C4-201ENST00000372146 IL9P15248 144 aa12.52□□□□□ -0.41
GTF3C4-201ENST00000372146 UBE2E2Q96LR5 201 aa12.52□□□□□ -0.41
GTF3C4-201ENST00000372146 TRAV26-2A0A0B4J265 109 aa12.51□□□□□ -0.41
GTF3C4-201ENST00000372146 CCL3L1P16619 93 aa12.51□□□□□ -0.41
GTF3C4-201ENST00000372146 ZNF106Q9H2Y7 1883 aaKnown RBP12.51□□□□□ -0.41
GTF3C4-201ENST00000372146 CECR9P0C854 216 aa12.51□□□□□ -0.41
GTF3C4-201ENST00000372146 C19orf48Q6RUI8 117 aa12.51□□□□□ -0.41
GTF3C4-201ENST00000372146 CFHR4Q92496 578 aa12.51□□□□□ -0.41
GTF3C4-201ENST00000372146 ZNF501Q96CX3 271 aaPredicted RBP12.51□□□□□ -0.41
GTF3C4-201ENST00000372146 TANC1Q9C0D5 1861 aa12.51□□□□□ -0.41
GTF3C4-201ENST00000372146 CTSBP07858 339 aa12.51□□□□□ -0.41
GTF3C4-201ENST00000372146 FHL5Q5TD97 284 aa12.51□□□□□ -0.41
GTF3C4-201ENST00000372146 NSUN5P1Q3KNT7 163 aa12.51□□□□□ -0.41
GTF3C4-201ENST00000372146 TMEM75Q8N9X5 138 aa12.51□□□□□ -0.41
GTF3C4-201ENST00000372146 TAL2Q16559 108 aa12.5□□□□□ -0.41
GTF3C4-201ENST00000372146 J3QW42 95 aa12.5□□□□□ -0.41
GTF3C4-201ENST00000372146 TFF1P04155 84 aa12.5□□□□□ -0.41
GTF3C4-201ENST00000372146 THBDP07204 575 aa12.5□□□□□ -0.41
GTF3C4-201ENST00000372146 LINC01560Q8TB33 94 aa12.5□□□□□ -0.41
GTF3C4-201ENST00000372146 LINC00479Q96M42 142 aa12.5□□□□□ -0.41
GTF3C4-201ENST00000372146 SRSF2Q01130 221 aaKnown RBP12.5□□□□□ -0.41
GTF3C4-201ENST00000372146 Q6ZVH6 145 aa12.5□□□□□ -0.41
GTF3C4-201ENST00000372146 NEU4Q8WWR8 484 aaPredicted RBP12.5□□□□□ -0.41
GTF3C4-201ENST00000372146 IGHV2OR16-5A0A0B4J2B6 119 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 HERV-K104P63124 156 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 C7orf69Q9H7B7 122 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 NDUFA12Q9UI09 145 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 WDR83OSQ9Y284 106 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 NXPH4O95158 308 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 Q86TA4 180 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 IGFBPL1Q8WX77 278 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 SHANK3Q9BYB0 1731 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 TMEM213A2RRL7 107 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 SAP30O75446 220 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 NPYP01303 97 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 LINC00271P0C7V0 271 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 TRBV7-1A0A0A6YYK4 115 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 SIVA1O15304 175 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 IGKV1D-43A0A0B4J1Z2 117 aa12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 KIF26AQ9ULI4 1882 aaPredicted RBP12.49□□□□□ -0.41
GTF3C4-201ENST00000372146 COL11A2P13942 1736 aaPredicted RBP12.48□□□□□ -0.41
GTF3C4-201ENST00000372146 A0A087WV48 116 aa12.48□□□□□ -0.41
GTF3C4-201ENST00000372146 MST1P26927 711 aa12.48□□□□□ -0.41
GTF3C4-201ENST00000372146 C2orf66Q6UXQ4 117 aa12.48□□□□□ -0.41
GTF3C4-201ENST00000372146 IGHV2-70DA0A0C4DH43 119 aa12.48□□□□□ -0.41
GTF3C4-201ENST00000372146 SUPT4H1P63272 117 aaKnown RBP12.48□□□□□ -0.41
GTF3C4-201ENST00000372146 SLC22A18ASQ8N1D0 253 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms