RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 C5orf56Q8N8D9 126 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 DUX5Q96PT3 197 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 HSPB9Q9BQS6 159 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 PRSS22Q9GZN4 317 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 MEGF9Q9H1U4 602 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 AAMDCQ9H7C9 122 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 RABAC1Q9UI14 185 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 ZFP30Q9Y2G7 519 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 MGAM2Q2M2H8 2515 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 PAFAH1B2P68402 229 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 OR10J3Q5JRS4 329 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 FAM209BQ5JX69 171 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 SHISA2Q6UWI4 295 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 ZNF502Q8TBZ5 544 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 DAZAP1Q96EP5 407 aaKnown RBP10.94□□□□□ -0.66
LDB3-204ENST00000372066 ZNF414Q96IQ9 312 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 P01737 135 aa10.93□□□□□ -0.66
LDB3-204ENST00000372066 CTSGP08311 255 aa10.93□□□□□ -0.66
LDB3-204ENST00000372066 TCL1AP56279 114 aa10.93□□□□□ -0.66
LDB3-204ENST00000372066 PRR27Q6MZM9 219 aa10.93□□□□□ -0.66
LDB3-204ENST00000372066 TRBV7-1A0A0A6YYK4 115 aa10.92□□□□□ -0.66
LDB3-204ENST00000372066 OR2T8A6NH00 312 aa10.92□□□□□ -0.66
LDB3-204ENST00000372066 NPIPB6E9PJ23 425 aa10.92□□□□□ -0.66
LDB3-204ENST00000372066 ECSCRQ19T08 205 aa10.92□□□□□ -0.66
LDB3-204ENST00000372066 PRR31Q5SQ13 230 aa10.92□□□□□ -0.66
LDB3-204ENST00000372066 GOLT1AQ6ZVE7 132 aa10.92□□□□□ -0.66
LDB3-204ENST00000372066 BCL6BQ8N143 479 aaPredicted RBP10.92□□□□□ -0.66
LDB3-204ENST00000372066 EXOC3-AS1Q8N2X6 119 aa10.92□□□□□ -0.66
LDB3-204ENST00000372066 EEF1AKMT3Q96AZ1 226 aa10.92□□□□□ -0.66
LDB3-204ENST00000372066 TRAV40A0A0B4J280 105 aa10.91□□□□□ -0.66
LDB3-204ENST00000372066 H3BTX0 84 aa10.91□□□□□ -0.66
LDB3-204ENST00000372066 IGLV2-11P01706 119 aa10.91□□□□□ -0.66
LDB3-204ENST00000372066 SNRPCP09234 159 aaKnown RBP10.91□□□□□ -0.66
LDB3-204ENST00000372066 CSN1S1P47710 185 aa10.91□□□□□ -0.66
LDB3-204ENST00000372066 TPPP2P59282 170 aa10.91□□□□□ -0.66
LDB3-204ENST00000372066 RHOGP84095 191 aa10.91□□□□□ -0.66
LDB3-204ENST00000372066 PSG3Q16557 428 aa10.91□□□□□ -0.66
LDB3-204ENST00000372066 C15orf32Q32M92 178 aa10.91□□□□□ -0.66
LDB3-204ENST00000372066 MRPL54Q6P161 138 aaKnown RBP10.91□□□□□ -0.66
LDB3-204ENST00000372066 NUP35Q8NFH5 326 aa10.91□□□□□ -0.66
LDB3-204ENST00000372066 NEU1Q99519 415 aa10.91□□□□□ -0.66
LDB3-204ENST00000372066 S4R3C0 116 aa10.91□□□□□ -0.66
LDB3-204ENST00000372066 DNAJC9-AS1A6NH13 148 aa10.9□□□□□ -0.66
LDB3-204ENST00000372066 M0QZK8 103 aa10.9□□□□□ -0.66
LDB3-204ENST00000372066 BRI3O95415 125 aa10.9□□□□□ -0.66
LDB3-204ENST00000372066 A0A1B0GXF2 115 aa10.9□□□□□ -0.67
LDB3-204ENST00000372066 FAM223BA6NKX1 122 aa10.9□□□□□ -0.67
LDB3-204ENST00000372066 HIGD1CA8MV81 97 aa10.9□□□□□ -0.67
LDB3-204ENST00000372066 DIRC3C9JPN6 131 aa10.9□□□□□ -0.67
LDB3-204ENST00000372066 CA1P00915 261 aaPredicted RBP10.9□□□□□ -0.67
LDB3-204ENST00000372066 APCSP02743 223 aa10.9□□□□□ -0.67
LDB3-204ENST00000372066 RAB4BP61018 213 aa10.9□□□□□ -0.67
LDB3-204ENST00000372066 PKIAP61925 76 aa10.9□□□□□ -0.67
LDB3-204ENST00000372066 LBHQ53QV2 105 aaPredicted RBP10.9□□□□□ -0.67
LDB3-204ENST00000372066 C16orf54Q6UWD8 224 aa10.9□□□□□ -0.67
LDB3-204ENST00000372066 FAM223AQ8IWN6 122 aa10.9□□□□□ -0.67
LDB3-204ENST00000372066 LINC00469Q8N7U9 141 aa10.9□□□□□ -0.67
LDB3-204ENST00000372066 PRDM13Q9H4Q3 707 aa10.9□□□□□ -0.67
LDB3-204ENST00000372066 PSG8Q9UQ74 426 aa10.9□□□□□ -0.67
LDB3-204ENST00000372066 A0A087X0K7 114 aa10.89□□□□□ -0.67
LDB3-204ENST00000372066 GRIFINA4D1Z8 144 aa10.89□□□□□ -0.67
LDB3-204ENST00000372066 H3BUA1 57 aa10.89□□□□□ -0.67
LDB3-204ENST00000372066 GZMBP10144 247 aa10.89□□□□□ -0.67
LDB3-204ENST00000372066 RELQ04864 619 aaPredicted RBP10.89□□□□□ -0.67
LDB3-204ENST00000372066 IQCJQ1A5X6 159 aa10.89□□□□□ -0.67
LDB3-204ENST00000372066 C19orf54Q5BKX5 351 aa10.89□□□□□ -0.67
LDB3-204ENST00000372066 RBPMS2Q6ZRY4 209 aaKnown RBP10.89□□□□□ -0.67
LDB3-204ENST00000372066 PRNTQ86SH4 94 aa10.89□□□□□ -0.67
LDB3-204ENST00000372066 BAGE3Q86Y29 109 aa10.89□□□□□ -0.67
LDB3-204ENST00000372066 TMEM256Q8N2U0 113 aa10.89□□□□□ -0.67
LDB3-204ENST00000372066 ZFAND3Q9H8U3 227 aa10.89□□□□□ -0.67
LDB3-204ENST00000372066 MEGF8Q7Z7M0 2845 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 IGHV3OR16-10A0A075B7F0 116 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 TRAV41A0A0B4J266 112 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 TSTD3H0UI37 97 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 SPINK4O60575 86 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 GPR183P32249 361 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 HBBP68871 147 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 SLC35B1P78383 322 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 DEFA6Q01524 100 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 C1orf194Q5T5A4 169 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 Q6AWC8 147 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 COX8CQ7Z4L0 72 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 SGK494Q96LW2 274 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 C17orf77Q96MU5 243 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 TP53TG3Q9ULZ0 132 aa10.88□□□□□ -0.67
LDB3-204ENST00000372066 SERF1AO75920 110 aa10.87□□□□□ -0.67
LDB3-204ENST00000372066 IGHV3-23P01764 117 aa10.87□□□□□ -0.67
LDB3-204ENST00000372066 IGF1P05019 195 aa10.87□□□□□ -0.67
LDB3-204ENST00000372066 RNASE1P07998 156 aaKnown RBP10.87□□□□□ -0.67
LDB3-204ENST00000372066 FOXA3P55318 350 aaPredicted RBP10.87□□□□□ -0.67
LDB3-204ENST00000372066 PIFOQ8TCI5 191 aa10.87□□□□□ -0.67
LDB3-204ENST00000372066 TRAV8-1A0A0A6YYK1 113 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 FRMD6-AS1P0C7T7 363 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 CT45A10P0DMU9 189 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 ATP5G2Q06055 141 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 SAPCD1Q5SSQ6 148 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 FAM162BQ5T6X4 162 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 TOMM20LQ6UXN7 152 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms