RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 CLEC3BP05452 202 aa15.96■□□□□ 0.15
VEGFA-204ENST00000372064 RIGQ13278 110 aa15.96■□□□□ 0.15
VEGFA-204ENST00000372064 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.96■□□□□ 0.15
VEGFA-204ENST00000372064 CCL19Q99731 98 aa15.96■□□□□ 0.15
VEGFA-204ENST00000372064 IGKV2-40A0A087WW87 121 aaPredicted RBP15.95■□□□□ 0.14
VEGFA-204ENST00000372064 C2orf70A6NJV1 201 aa15.95■□□□□ 0.14
VEGFA-204ENST00000372064 IGKV2D-40P01614 121 aaPredicted RBP15.95■□□□□ 0.14
VEGFA-204ENST00000372064 ZNF705AQ6ZN79 300 aaPredicted RBP15.95■□□□□ 0.14
VEGFA-204ENST00000372064 CCDC140Q96MF4 163 aa15.95■□□□□ 0.14
VEGFA-204ENST00000372064 SPG11Q96JI7 2443 aa15.95■□□□□ 0.14
VEGFA-204ENST00000372064 VPS13CQ709C8 3753 aa15.95■□□□□ 0.14
VEGFA-204ENST00000372064 SAPCD1Q5SSQ6 148 aa15.95■□□□□ 0.14
VEGFA-204ENST00000372064 DMRTA1Q5VZB9 504 aa15.95■□□□□ 0.14
VEGFA-204ENST00000372064 IGFL4Q6B9Z1 124 aa15.95■□□□□ 0.14
VEGFA-204ENST00000372064 BRD3OSQ6XYD6 125 aa15.95■□□□□ 0.14
VEGFA-204ENST00000372064 PIMREGQ9BSJ6 248 aa15.95■□□□□ 0.14
VEGFA-204ENST00000372064 A0A087X0K7 114 aa15.94■□□□□ 0.14
VEGFA-204ENST00000372064 BTF3P20290 206 aaKnown RBP15.94■□□□□ 0.14
VEGFA-204ENST00000372064 RAB9AP51151 201 aa15.94■□□□□ 0.14
VEGFA-204ENST00000372064 PRR25Q96S07 402 aa15.94■□□□□ 0.14
VEGFA-204ENST00000372064 SPATA45Q537H7 98 aa15.94■□□□□ 0.14
VEGFA-204ENST00000372064 M0QZ24 198 aa15.93■□□□□ 0.14
VEGFA-204ENST00000372064 BUB3O43684 328 aa15.93■□□□□ 0.14
VEGFA-204ENST00000372064 SH2D1AO60880 128 aa15.93■□□□□ 0.14
VEGFA-204ENST00000372064 HLA-DMBP28068 263 aa15.93■□□□□ 0.14
VEGFA-204ENST00000372064 CLEC19AQ6UXS0 136 aa15.93■□□□□ 0.14
VEGFA-204ENST00000372064 TRAV40A0A0B4J280 105 aa15.93■□□□□ 0.14
VEGFA-204ENST00000372064 RELQ04864 619 aaPredicted RBP15.93■□□□□ 0.14
VEGFA-204ENST00000372064 PMCHL1Q16048 86 aa15.93■□□□□ 0.14
VEGFA-204ENST00000372064 ZFHX3Q15911 3703 aa15.93■□□□□ 0.14
VEGFA-204ENST00000372064 IGHV1-69DA0A0B4J2H0 117 aa15.92■□□□□ 0.14
VEGFA-204ENST00000372064 IGHV1-24A0A0C4DH33 117 aa15.92■□□□□ 0.14
VEGFA-204ENST00000372064 CLPSL1A2RUU4 121 aa15.92■□□□□ 0.14
VEGFA-204ENST00000372064 IGHV1-69P01742 117 aa15.92■□□□□ 0.14
VEGFA-204ENST00000372064 LINC00614P0C842 121 aa15.92■□□□□ 0.14
VEGFA-204ENST00000372064 C10orf105Q8TEF2 133 aa15.92■□□□□ 0.14
VEGFA-204ENST00000372064 ZNF493Q6ZR52 646 aa15.92■□□□□ 0.14
VEGFA-204ENST00000372064 TRBV7-1A0A0A6YYK4 115 aa15.91■□□□□ 0.14
VEGFA-204ENST00000372064 TMEM189A5PLL7 270 aa15.91■□□□□ 0.14
VEGFA-204ENST00000372064 GOSR1O95249 250 aa15.91■□□□□ 0.14
VEGFA-204ENST00000372064 C19orf54Q5BKX5 351 aa15.91■□□□□ 0.14
VEGFA-204ENST00000372064 CYB5R2Q6BCY4 276 aa15.91■□□□□ 0.14
VEGFA-204ENST00000372064 LCN12Q6JVE5 192 aa15.91■□□□□ 0.14
VEGFA-204ENST00000372064 PIFOQ8TCI5 191 aa15.91■□□□□ 0.14
VEGFA-204ENST00000372064 EEF1AKMT3Q96AZ1 226 aa15.91■□□□□ 0.14
VEGFA-204ENST00000372064 NUTF2P61970 127 aaKnown RBP15.91■□□□□ 0.14
VEGFA-204ENST00000372064 VGLL1Q99990 258 aa15.91■□□□□ 0.14
VEGFA-204ENST00000372064 MOB4Q9Y3A3 225 aa15.91■□□□□ 0.14
VEGFA-204ENST00000372064 RNF224P0DH78 156 aa15.91■□□□□ 0.14
VEGFA-204ENST00000372064 LINC00527Q9UJ94 153 aa15.91■□□□□ 0.14
VEGFA-204ENST00000372064 IGSF10Q6WRI0 2623 aa15.9■□□□□ 0.14
VEGFA-204ENST00000372064 DOPEY1Q5JWR5 2465 aa15.9■□□□□ 0.14
VEGFA-204ENST00000372064 M0QZK8 103 aa15.9■□□□□ 0.14
VEGFA-204ENST00000372064 CRXO43186 299 aaPredicted RBP15.9■□□□□ 0.14
VEGFA-204ENST00000372064 CRIP2P52943 208 aaPredicted RBP15.9■□□□□ 0.14
VEGFA-204ENST00000372064 CELSR1Q9NYQ6 3014 aa15.89■□□□□ 0.13
VEGFA-204ENST00000372064 IGHV3-66A0A0C4DH42 116 aa15.89■□□□□ 0.13
VEGFA-204ENST00000372064 ATP5J2P56134 94 aa15.89■□□□□ 0.13
VEGFA-204ENST00000372064 Q8TAT8 98 aa15.89■□□□□ 0.13
VEGFA-204ENST00000372064 TPPP3Q9BW30 176 aa15.89■□□□□ 0.13
VEGFA-204ENST00000372064 CLEC5AQ9NY25 188 aa15.89■□□□□ 0.13
VEGFA-204ENST00000372064 ACACBO00763 2458 aa15.89■□□□□ 0.13
VEGFA-204ENST00000372064 IGHV4-30-2A0A087WSY4 118 aa15.89■□□□□ 0.13
VEGFA-204ENST00000372064 LYZL1Q6UWQ5 148 aa15.89■□□□□ 0.13
VEGFA-204ENST00000372064 USP9XQ93008 2570 aaPredicted RBP15.89■□□□□ 0.13
VEGFA-204ENST00000372064 IGLC3P0DOY3 106 aa15.88■□□□□ 0.13
VEGFA-204ENST00000372064 IGHV4-38-2P0DP08 117 aa15.88■□□□□ 0.13
VEGFA-204ENST00000372064 CLEC2AQ6UVW9 174 aa15.88■□□□□ 0.13
VEGFA-204ENST00000372064 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.88■□□□□ 0.13
VEGFA-204ENST00000372064 ATP6V0BQ99437 205 aa15.88■□□□□ 0.13
VEGFA-204ENST00000372064 TMEM70Q9BUB7 260 aa15.88■□□□□ 0.13
VEGFA-204ENST00000372064 FLNCQ14315 2725 aa15.88■□□□□ 0.13
VEGFA-204ENST00000372064 IGHV3OR16-13A0A075B7E8 117 aa15.88■□□□□ 0.13
VEGFA-204ENST00000372064 TMSB15BA0A087X1C1 80 aa15.88■□□□□ 0.13
VEGFA-204ENST00000372064 IGHV3-74A0A0B4J1X5 117 aa15.88■□□□□ 0.13
VEGFA-204ENST00000372064 SPATA12Q7Z6I5 190 aa15.88■□□□□ 0.13
VEGFA-204ENST00000372064 MEGF9Q9H1U4 602 aa15.88■□□□□ 0.13
VEGFA-204ENST00000372064 ZNF80P51504 273 aaPredicted RBP15.88■□□□□ 0.13
VEGFA-204ENST00000372064 SSTP61278 116 aa15.88■□□□□ 0.13
VEGFA-204ENST00000372064 SRSF2Q01130 221 aaKnown RBP15.88■□□□□ 0.13
VEGFA-204ENST00000372064 NDUFS8O00217 210 aa15.87■□□□□ 0.13
VEGFA-204ENST00000372064 UQCR10Q9UDW1 63 aa15.87■□□□□ 0.13
VEGFA-204ENST00000372064 RBAKDNA6NC62 111 aa15.87■□□□□ 0.13
VEGFA-204ENST00000372064 OR5AL1P0C617 328 aa15.87■□□□□ 0.13
VEGFA-204ENST00000372064 BMI1P35226 326 aa15.87■□□□□ 0.13
VEGFA-204ENST00000372064 RPS20P60866 119 aaKnown RBP15.87■□□□□ 0.13
VEGFA-204ENST00000372064 ATOH7Q8N100 152 aa15.87■□□□□ 0.13
VEGFA-204ENST00000372064 SLC50A1Q9BRV3 221 aa15.87■□□□□ 0.13
VEGFA-204ENST00000372064 TRAV41A0A0B4J266 112 aa15.86■□□□□ 0.13
VEGFA-204ENST00000372064 TMEM8BA6NDV4 472 aa15.86■□□□□ 0.13
VEGFA-204ENST00000372064 ZNF575Q86XF7 245 aa15.86■□□□□ 0.13
VEGFA-204ENST00000372064 KLHDC1Q8N7A1 406 aa15.86■□□□□ 0.13
VEGFA-204ENST00000372064 PSMG3-AS1Q96PY0 264 aa15.86■□□□□ 0.13
VEGFA-204ENST00000372064 ZNF207O43670 478 aaKnown RBP15.86■□□□□ 0.13
VEGFA-204ENST00000372064 LEPROTL1O95214 131 aa15.86■□□□□ 0.13
VEGFA-204ENST00000372064 ATP5G2Q06055 141 aa15.86■□□□□ 0.13
VEGFA-204ENST00000372064 TRAV9-2A0A087WT02 112 aa15.85■□□□□ 0.13
VEGFA-204ENST00000372064 IGHV3-49A0A0A0MS15 119 aa15.85■□□□□ 0.13
VEGFA-204ENST00000372064 FAM223BA6NKX1 122 aa15.85■□□□□ 0.13
VEGFA-204ENST00000372064 ZNF138P52744 262 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms