RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 CGB7P0DN87 165 aa7.42□□□□□ -1.22
HMGCLL1-204ENST00000370852 HLA-DRB4P13762 266 aa7.42□□□□□ -1.22
HMGCLL1-204ENST00000370852 CYB561P49447 251 aa7.42□□□□□ -1.22
HMGCLL1-204ENST00000370852 MSMPQ1L6U9 139 aa7.42□□□□□ -1.22
HMGCLL1-204ENST00000370852 ZNF493Q6ZR52 646 aa7.42□□□□□ -1.22
HMGCLL1-204ENST00000370852 MOGAT3Q86VF5 341 aa7.42□□□□□ -1.22
HMGCLL1-204ENST00000370852 TMEM75Q8N9X5 138 aa7.42□□□□□ -1.22
HMGCLL1-204ENST00000370852 DEFB108BQ8NET1 73 aa7.42□□□□□ -1.22
HMGCLL1-204ENST00000370852 PPP1R35Q8TAP8 253 aa7.42□□□□□ -1.22
HMGCLL1-204ENST00000370852 TMEM158Q8WZ71 300 aa7.42□□□□□ -1.22
HMGCLL1-204ENST00000370852 HLA-DRB4X5D2U9 266 aa7.42□□□□□ -1.22
HMGCLL1-204ENST00000370852 TRAV4A0A0B4J268 109 aa7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 H3BVH4 76 aa7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 LTBRP36941 435 aa7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 MEOX1P50221 254 aa7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 ERHP84090 104 aaKnown RBP7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 TWIST1Q15672 202 aa7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 POU2AF1Q16633 256 aa7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 ZFAND6Q6FIF0 208 aa7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 C1orf122Q6ZSJ8 110 aa7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 ZCCHC24Q8N2G6 241 aaKnown RBP7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 THAP8Q8NA92 274 aa7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 HARBI1Q96MB7 349 aa7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 ZNF71Q9NQZ8 489 aaPredicted RBP7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 LYZP61626 148 aa7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 Q6ZQT7 251 aa7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 TNRC18O15417 2968 aaPredicted RBP7.41□□□□□ -1.22
HMGCLL1-204ENST00000370852 MUC3AQ02505 3323 aa7.4□□□□□ -1.22
HMGCLL1-204ENST00000370852 HOXA3O43365 443 aaPredicted RBP7.4□□□□□ -1.22
HMGCLL1-204ENST00000370852 DPM2O94777 84 aa7.4□□□□□ -1.22
HMGCLL1-204ENST00000370852 IGHV1-2P23083 117 aa7.4□□□□□ -1.22
HMGCLL1-204ENST00000370852 ZNF575Q86XF7 245 aa7.4□□□□□ -1.22
HMGCLL1-204ENST00000370852 TEX29Q8N6K0 151 aa7.4□□□□□ -1.22
HMGCLL1-204ENST00000370852 CITED1Q99966 193 aa7.4□□□□□ -1.22
HMGCLL1-204ENST00000370852 A0A1W2PPI3 338 aa7.4□□□□□ -1.23
HMGCLL1-204ENST00000370852 EFNA4P52798 201 aa7.4□□□□□ -1.23
HMGCLL1-204ENST00000370852 ZGRF1Q86YA3 2104 aa7.4□□□□□ -1.23
HMGCLL1-204ENST00000370852 RNF185Q96GF1 192 aa7.4□□□□□ -1.23
HMGCLL1-204ENST00000370852 RAI1Q7Z5J4 1906 aaPredicted RBP7.4□□□□□ -1.23
HMGCLL1-204ENST00000370852 MED13Q9UHV7 2174 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 TCL1BO95988 128 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 HOXB4P17483 251 aaPredicted RBP7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 ANKRD29Q8N6D5 301 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 PIFOQ8TCI5 191 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 PLEKHB2Q96CS7 222 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 TTTY12Q9BZ98 90 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 DEFB127Q9H1M4 99 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 TMEM133Q9H2Q1 129 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 PPDPFQ9H3Y8 114 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 OTORQ9NRC9 128 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 SSUH2Q9Y2M2 353 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 RELNP78509 3460 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 SH2D1AO60880 128 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 FOLR3P41439 243 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 CRIP2P52943 208 aaPredicted RBP7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 NDUFV3P56181 108 aaKnown RBP7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 PRB3Q04118 309 aaPredicted RBP7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 FAM159AQ6UWV7 190 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 DLX4Q92988 240 aaPredicted RBP7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 SPRY4Q9C004 299 aa7.39□□□□□ -1.23
HMGCLL1-204ENST00000370852 SVEP1Q4LDE5 3571 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 A0A087WX48 190 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 IGHV3-72A0A0B4J1Y9 119 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 VSTM5A8MXK1 200 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 SCGB2A1O75556 95 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 EGR2P11161 476 aaPredicted RBP7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 ZNF80P51504 273 aaPredicted RBP7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 SRSF1Q07955 248 aaKnown RBP eCLIP7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 IGFL4Q6B9Z1 124 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 OR10X1Q8NGY0 326 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 PPDPFLQ8WWR9 84 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 PROCRQ9UNN8 238 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 TNFRSF18Q9Y5U5 241 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 TRAV26-2A0A0B4J265 109 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 FABP5P3A8MUU1 101 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 IL4P05112 153 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 ZNF688P0C7X2 276 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 FAM216BQ8N7L0 139 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 ATP6V0E2Q8NHE4 81 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 Q8TAT8 98 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 SLC25A39Q9BZJ4 359 aaPredicted RBP7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 S4R3C0 116 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 CACNA1EQ15878 2313 aa7.38□□□□□ -1.23
HMGCLL1-204ENST00000370852 SRRM5B3KS81 715 aa7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 TNFRSF6BO95407 300 aa7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 MRGPRG-AS1Q2M3A8 158 aa7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 TEN1Q86WV5 123 aa7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 C8orf46Q8TAG6 207 aa7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 CCL13Q99616 98 aa7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 IGKV2-40A0A087WW87 121 aaPredicted RBP7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 GAGE12JA6NER3 117 aa7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 GAGE7O76087 117 aa7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 IGKV2D-40P01614 121 aaPredicted RBP7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 CLEC3BP05452 202 aa7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 LGALS1P09382 135 aaKnown RBP7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 GAGE12FP0CL80 117 aa7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 GAGE12GP0CL81 117 aa7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 GAGE12IP0CL82 117 aa7.37□□□□□ -1.23
HMGCLL1-204ENST00000370852 CNTFRP26992 372 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms