RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 GLRXP35754 106 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 C3orf36Q3SXR2 165 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 ANXA2RQ3ZCQ2 193 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 OTORQ9NRC9 128 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 GAGE12HA6NDE8 117 aa8.3□□□□□ -1.08
PRPF38B-201ENST00000370021 RAB9AP51151 201 aa8.3□□□□□ -1.08
PRPF38B-201ENST00000370021 EMP1P54849 157 aa8.3□□□□□ -1.08
PRPF38B-201ENST00000370021 MRPL16Q9NX20 251 aaKnown RBP8.3□□□□□ -1.08
PRPF38B-201ENST00000370021 ZFHX4Q86UP3 3567 aa8.3□□□□□ -1.08
PRPF38B-201ENST00000370021 TRAV17A0A0B4J275 112 aa8.3□□□□□ -1.08
PRPF38B-201ENST00000370021 MRPL51Q4U2R6 128 aaKnown RBP8.3□□□□□ -1.08
PRPF38B-201ENST00000370021 C1orf210Q8IVY1 113 aa8.3□□□□□ -1.08
PRPF38B-201ENST00000370021 S100A4P26447 101 aaKnown RBP8.3□□□□□ -1.08
PRPF38B-201ENST00000370021 HLA-DMBP28068 263 aa8.3□□□□□ -1.08
PRPF38B-201ENST00000370021 RBPJQ06330 500 aa8.3□□□□□ -1.08
PRPF38B-201ENST00000370021 SPANXN1Q5VSR9 72 aa8.3□□□□□ -1.08
PRPF38B-201ENST00000370021 VKORC1Q9BQB6 163 aa8.3□□□□□ -1.08
PRPF38B-201ENST00000370021 TRAV26-2A0A0B4J265 109 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 FNDC10F2Z333 226 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 GAGE13Q4V321 117 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 TTC9CQ8N5M4 171 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 OR9G4Q8NGQ1 327 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 TMEM158Q8WZ71 300 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 NDUFS7O75251 213 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 CEACAM3P40198 252 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 ZNF71Q9NQZ8 489 aaPredicted RBP8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 IGKV1D-37A0A075B6S9 117 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 SPAARA0A1B0GVQ0 90 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 TMEM8BA6NDV4 472 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 NPIPB6E9PJ23 425 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 SH2D1AO60880 128 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 MGPP08493 103 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 MDS2Q8NDY4 140 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 NACAE9PAV3 2078 aa8.29□□□□□ -1.08
PRPF38B-201ENST00000370021 MAP1AP78559 2803 aaPredicted RBP8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 IGKCP01834 107 aa8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 PPP1R27Q86WC6 154 aa8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 TMEM167AQ8TBQ9 72 aa8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 LINC00312Q9Y6C7 94 aa8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 IGKV2D-26A0A0A0MRZ7 120 aa8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 Q1RN00 199 aa8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 RNF125Q96EQ8 232 aa8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 BEX4Q9NWD9 120 aaPredicted RBP8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 ADGRG4Q8IZF6 3080 aa8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 HAX1O00165 279 aa8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 FTH1P19P0C7X4 201 aa8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 ERCC8Q13216 396 aa8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 VGLL1Q99990 258 aa8.28□□□□□ -1.08
PRPF38B-201ENST00000370021 M0R381 172 aa8.27□□□□□ -1.09
PRPF38B-201ENST00000370021 MC5RP33032 325 aa8.27□□□□□ -1.09
PRPF38B-201ENST00000370021 EFNA4P52798 201 aa8.27□□□□□ -1.09
PRPF38B-201ENST00000370021 PTPRBP23467 1997 aa8.27□□□□□ -1.09
PRPF38B-201ENST00000370021 TLN1Q9Y490 2541 aaKnown RBP8.27□□□□□ -1.09
PRPF38B-201ENST00000370021 ATP5IP56385 69 aaPredicted RBP8.27□□□□□ -1.09
PRPF38B-201ENST00000370021 FAM104BQ5XKR9 115 aa8.27□□□□□ -1.09
PRPF38B-201ENST00000370021 SLC25A15Q9Y619 301 aa8.27□□□□□ -1.09
PRPF38B-201ENST00000370021 ANKHD1Q8IWZ3 2542 aaKnown RBP8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 OR11H12B2RN74 326 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 GAS8-AS1O95177 125 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 WT1P19544 449 aaPredicted RBP8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 INSL3P51460 131 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 ZNF474Q6S9Z5 364 aaPredicted RBP8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 OR11H1Q8NG94 326 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 OR11H2Q8NH07 326 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 A0A1W2PNU3 283 aaPredicted RBP8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 NDUFS8O00217 210 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 ECSCRQ19T08 205 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 MRPL35Q9NZE8 188 aaKnown RBP8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 TRBV25-1A0A075B6N4 114 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 TRAV26-1A0A087WT03 109 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 F5H697 171 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 LY6HO94772 140 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 DPM2O94777 84 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 GP9P14770 177 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 LGALS7P47929 136 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 CD300EQ496F6 205 aaPredicted RBP8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 C1orf122Q6ZSJ8 110 aa8.26□□□□□ -1.09
PRPF38B-201ENST00000370021 PSMB11A5LHX3 300 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 C19orf71A6NCJ1 209 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 CRXO43186 299 aaPredicted RBP8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 BOD1L2Q8IYS8 172 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 MLST8Q9BVC4 326 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 SPINK8P0C7L1 97 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 SYT8Q8NBV8 401 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 PTH2Q96A98 100 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 ATP6V0BQ99437 205 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 TRGV9Q99603 122 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 PRSS22Q9GZN4 317 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 PGPEP1Q9NXJ5 209 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 ZNF492Q9P255 531 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 ATRXP46100 2492 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 PRSS47A8MTI9 375 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 SMIM17P0DL12 118 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 RNF182Q8N6D2 247 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 GFRA4Q9GZZ7 299 aa8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 GEMIN7Q9H840 131 aaKnown RBP8.25□□□□□ -1.09
PRPF38B-201ENST00000370021 TM4SF5O14894 197 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 LGALS9BQ3B8N2 356 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 LGALS9CQ6DKI2 356 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 C22orf34Q6ZV56 151 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms