RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 HEATR1Q9H583 2144 aaKnown RBP12.74□□□□□ -0.37
CHD1L-203ENST00000369259 K7EM74 188 aa12.73□□□□□ -0.37
CHD1L-203ENST00000369259 MT-ATP8P03928 68 aa12.73□□□□□ -0.37
CHD1L-203ENST00000369259 PPIFP30405 207 aaKnown RBP12.73□□□□□ -0.37
CHD1L-203ENST00000369259 SPRY4Q9C004 299 aa12.73□□□□□ -0.37
CHD1L-203ENST00000369259 NXT2Q9NPJ8 142 aaKnown RBP12.73□□□□□ -0.37
CHD1L-203ENST00000369259 TMEM160Q9NX00 188 aa12.73□□□□□ -0.37
CHD1L-203ENST00000369259 RPL27AP46776 148 aaKnown RBP12.73□□□□□ -0.37
CHD1L-203ENST00000369259 SHANK2-AS3Q9BTD1 123 aa12.73□□□□□ -0.37
CHD1L-203ENST00000369259 VPS13AQ96RL7 3174 aa12.72□□□□□ -0.37
CHD1L-203ENST00000369259 TRAV40A0A0B4J280 105 aa12.72□□□□□ -0.37
CHD1L-203ENST00000369259 M0R3E3 92 aa12.72□□□□□ -0.37
CHD1L-203ENST00000369259 IGFBP4P22692 258 aa12.72□□□□□ -0.37
CHD1L-203ENST00000369259 ERG28Q9UKR5 140 aa12.72□□□□□ -0.37
CHD1L-203ENST00000369259 CCL3L1P16619 93 aa12.72□□□□□ -0.37
CHD1L-203ENST00000369259 RNF185Q96GF1 192 aa12.72□□□□□ -0.37
CHD1L-203ENST00000369259 RASL11BQ9BPW5 248 aa12.72□□□□□ -0.37
CHD1L-203ENST00000369259 URB1O60287 2271 aaKnown RBP12.71□□□□□ -0.37
CHD1L-203ENST00000369259 CFAP126Q5VTH2 177 aa12.71□□□□□ -0.37
CHD1L-203ENST00000369259 LCNL1Q6ZST4 164 aa12.71□□□□□ -0.37
CHD1L-203ENST00000369259 Q6ZUT4 128 aa12.71□□□□□ -0.37
CHD1L-203ENST00000369259 TMEM105Q8N8V8 129 aa12.71□□□□□ -0.37
CHD1L-203ENST00000369259 TMEM158Q8WZ71 300 aa12.71□□□□□ -0.37
CHD1L-203ENST00000369259 TRBV7-3A0A075B6L6 115 aa12.71□□□□□ -0.38
CHD1L-203ENST00000369259 PATE3B3GLJ2 98 aa12.71□□□□□ -0.38
CHD1L-203ENST00000369259 RBP4P02753 201 aa12.71□□□□□ -0.38
CHD1L-203ENST00000369259 RNF183Q96D59 192 aa12.71□□□□□ -0.38
CHD1L-203ENST00000369259 AHCTF1Q8WYP5 2266 aa12.71□□□□□ -0.38
CHD1L-203ENST00000369259 H3BRN7 92 aa12.7□□□□□ -0.38
CHD1L-203ENST00000369259 TNFRSF6BO95407 300 aa12.7□□□□□ -0.38
CHD1L-203ENST00000369259 SMCPP49901 116 aaPredicted RBP12.7□□□□□ -0.38
CHD1L-203ENST00000369259 TNFAIP6P98066 277 aaPredicted RBP12.7□□□□□ -0.38
CHD1L-203ENST00000369259 NFE4Q86UQ8 179 aa12.7□□□□□ -0.38
CHD1L-203ENST00000369259 FAM169BQ8N8A8 192 aa12.7□□□□□ -0.38
CHD1L-203ENST00000369259 C9orf106Q8NAJ2 232 aa12.7□□□□□ -0.38
CHD1L-203ENST00000369259 MRPL35Q9NZE8 188 aaKnown RBP12.7□□□□□ -0.38
CHD1L-203ENST00000369259 GAS8-AS1O95177 125 aa12.7□□□□□ -0.38
CHD1L-203ENST00000369259 XGP55808 180 aa12.7□□□□□ -0.38
CHD1L-203ENST00000369259 SLC25A15Q9Y619 301 aa12.7□□□□□ -0.38
CHD1L-203ENST00000369259 MED13Q9UHV7 2174 aa12.7□□□□□ -0.38
CHD1L-203ENST00000369259 PLXNB1O43157 2135 aa12.69□□□□□ -0.38
CHD1L-203ENST00000369259 SVILO95425 2214 aa12.69□□□□□ -0.38
CHD1L-203ENST00000369259 ENSAO43768 121 aaKnown RBP12.69□□□□□ -0.38
CHD1L-203ENST00000369259 EGR2P11161 476 aaPredicted RBP12.69□□□□□ -0.38
CHD1L-203ENST00000369259 GATA3P23771 443 aa12.69□□□□□ -0.38
CHD1L-203ENST00000369259 GLRXP35754 106 aa12.69□□□□□ -0.38
CHD1L-203ENST00000369259 MORN3Q6PF18 240 aaPredicted RBP12.69□□□□□ -0.38
CHD1L-203ENST00000369259 LINC01619G3V211 115 aa12.69□□□□□ -0.38
CHD1L-203ENST00000369259 HOXA3O43365 443 aaPredicted RBP12.69□□□□□ -0.38
CHD1L-203ENST00000369259 IGLC6P0CF74 106 aa12.69□□□□□ -0.38
CHD1L-203ENST00000369259 FHL3Q13643 280 aa12.69□□□□□ -0.38
CHD1L-203ENST00000369259 PLGLAQ15195 96 aa12.69□□□□□ -0.38
CHD1L-203ENST00000369259 RAI1Q7Z5J4 1906 aaPredicted RBP12.68□□□□□ -0.38
CHD1L-203ENST00000369259 MRPS12O15235 138 aaKnown RBP12.68□□□□□ -0.38
CHD1L-203ENST00000369259 CEACAM4O75871 244 aa12.68□□□□□ -0.38
CHD1L-203ENST00000369259 IGKV1-17P01599 117 aa12.68□□□□□ -0.38
CHD1L-203ENST00000369259 TEX36Q5VZQ5 186 aa12.68□□□□□ -0.38
CHD1L-203ENST00000369259 COX8CQ7Z4L0 72 aa12.68□□□□□ -0.38
CHD1L-203ENST00000369259 LINC00311Q8N616 119 aa12.68□□□□□ -0.38
CHD1L-203ENST00000369259 DLX4Q92988 240 aaPredicted RBP12.68□□□□□ -0.38
CHD1L-203ENST00000369259 MSRB1Q9NZV6 116 aa12.68□□□□□ -0.38
CHD1L-203ENST00000369259 IGLV3-9A0A075B6K5 115 aa12.67□□□□□ -0.38
CHD1L-203ENST00000369259 NCBP2LA6PVI3 153 aaKnown RBP12.67□□□□□ -0.38
CHD1L-203ENST00000369259 TMEM200BQ69YZ2 307 aa12.67□□□□□ -0.38
CHD1L-203ENST00000369259 RPEQ96AT9 228 aa12.67□□□□□ -0.38
CHD1L-203ENST00000369259 AAMDCQ9H7C9 122 aa12.67□□□□□ -0.38
CHD1L-203ENST00000369259 I3L2K1 104 aa12.67□□□□□ -0.38
CHD1L-203ENST00000369259 M0R1B8 84 aa12.67□□□□□ -0.38
CHD1L-203ENST00000369259 GLMPQ8WWB7 406 aa12.67□□□□□ -0.38
CHD1L-203ENST00000369259 IGHV3-72A0A0B4J1Y9 119 aa12.66□□□□□ -0.38
CHD1L-203ENST00000369259 IGHV1-46P01743 117 aa12.66□□□□□ -0.38
CHD1L-203ENST00000369259 IL4P05112 153 aa12.66□□□□□ -0.38
CHD1L-203ENST00000369259 Q8N8P6 123 aa12.66□□□□□ -0.38
CHD1L-203ENST00000369259 PGPEP1Q9NXJ5 209 aa12.66□□□□□ -0.38
CHD1L-203ENST00000369259 SS18L2Q9UHA2 77 aa12.66□□□□□ -0.38
CHD1L-203ENST00000369259 AGRNO00468 2067 aa12.66□□□□□ -0.38
CHD1L-203ENST00000369259 C8orf31Q8N9H6 132 aa12.66□□□□□ -0.38
CHD1L-203ENST00000369259 MYOZ3Q8TDC0 251 aa12.66□□□□□ -0.38
CHD1L-203ENST00000369259 A0A087WX48 190 aa12.65□□□□□ -0.38
CHD1L-203ENST00000369259 TEX22C9J3V5 150 aa12.65□□□□□ -0.38
CHD1L-203ENST00000369259 WT1P19544 449 aaPredicted RBP12.65□□□□□ -0.38
CHD1L-203ENST00000369259 PDE6HQ13956 83 aa12.65□□□□□ -0.38
CHD1L-203ENST00000369259 CFAP161Q6P656 301 aa12.65□□□□□ -0.38
CHD1L-203ENST00000369259 ANAPC13Q9BS18 74 aa12.65□□□□□ -0.38
CHD1L-203ENST00000369259 CRYGBP07316 175 aa12.65□□□□□ -0.38
CHD1L-203ENST00000369259 PLNP26678 52 aa12.65□□□□□ -0.38
CHD1L-203ENST00000369259 PRR25Q96S07 402 aa12.65□□□□□ -0.38
CHD1L-203ENST00000369259 CNFNQ9BYD5 112 aa12.65□□□□□ -0.38
CHD1L-203ENST00000369259 PROCRQ9UNN8 238 aa12.65□□□□□ -0.38
CHD1L-203ENST00000369259 IGLV2-18A0A075B6J9 118 aa12.64□□□□□ -0.39
CHD1L-203ENST00000369259 MYMXA0A1B0GTQ4 84 aa12.64□□□□□ -0.39
CHD1L-203ENST00000369259 IGHG3P01860 377 aa12.64□□□□□ -0.39
CHD1L-203ENST00000369259 GATA1P15976 413 aaPredicted RBP12.64□□□□□ -0.39
CHD1L-203ENST00000369259 CNTFRP26992 372 aa12.64□□□□□ -0.39
CHD1L-203ENST00000369259 ZNF575Q86XF7 245 aa12.64□□□□□ -0.39
CHD1L-203ENST00000369259 PPDPFLQ8WWR9 84 aa12.64□□□□□ -0.39
CHD1L-203ENST00000369259 VCX2Q9H322 139 aa12.64□□□□□ -0.39
CHD1L-203ENST00000369259 ZNF576Q9H609 170 aa12.64□□□□□ -0.39
CHD1L-203ENST00000369259 INTS1Q8N201 2190 aaKnown RBP12.64□□□□□ -0.39
CHD1L-203ENST00000369259 ABCA1O95477 2261 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms