RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 IGHV3-23P01764 117 aa6.71□□□□□ -1.33
TPM3-213ENST00000368545 CTSGP08311 255 aa6.71□□□□□ -1.33
TPM3-213ENST00000368545 OR10J4P0C629 311 aa6.71□□□□□ -1.33
TPM3-213ENST00000368545 GPR183P32249 361 aa6.71□□□□□ -1.33
TPM3-213ENST00000368545 TPPP2P59282 170 aa6.71□□□□□ -1.33
TPM3-213ENST00000368545 FOXE3Q13461 319 aa6.71□□□□□ -1.33
TPM3-213ENST00000368545 RHEBQ15382 184 aa6.71□□□□□ -1.33
TPM3-213ENST00000368545 TMEM190Q8WZ59 177 aa6.71□□□□□ -1.33
TPM3-213ENST00000368545 NOL4LQ96MY1 436 aaPredicted RBP6.71□□□□□ -1.33
TPM3-213ENST00000368545 TMEM14CQ9P0S9 112 aa6.71□□□□□ -1.33
TPM3-213ENST00000368545 LINC00527Q9UJ94 153 aa6.71□□□□□ -1.33
TPM3-213ENST00000368545 TRAV5A0A0B4J249 113 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 GAGE12JA6NER3 117 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 H3BQ15 152 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 M0R036 132 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 TGOLN2O43493 480 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 SCO1O75880 301 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 ATP5G3P48201 142 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 ZNF415Q09FC8 603 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 ATRAIDQ6UW56 229 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 SIGLECL1Q8N7X8 197 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 TVP23CQ96ET8 276 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 SMIM7Q9BQ49 75 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 TCEAL7Q9BRU2 100 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 SHANK2-AS3Q9BTD1 123 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 PARLQ9H300 379 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 YTHDF2Q9Y5A9 579 aaKnown RBP6.71□□□□□ -1.34
TPM3-213ENST00000368545 PUS1Q9Y606 427 aaKnown RBP eCLIP6.71□□□□□ -1.34
TPM3-213ENST00000368545 TLN2Q9Y4G6 2542 aa6.71□□□□□ -1.34
TPM3-213ENST00000368545 hDV102S1A0JD36 115 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 ZNF727A8MUV8 499 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 B4DEV8 164 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 GP9P14770 177 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 BPIFA4PQ86YQ2 179 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 GBGT1Q8N5D6 347 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 NEXN-AS1Q8NBZ9 246 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 C11orf52Q96A22 123 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 FXYD5Q96DB9 178 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 NAT8Q9UHE5 227 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 IGHG4P01861 327 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 PYYP10082 97 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 RAB9AP51151 201 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 SLC35B1P78383 322 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 KIAA0141Q14154 515 aaPredicted RBP6.7□□□□□ -1.34
TPM3-213ENST00000368545 USF2Q15853 346 aaPredicted RBP6.7□□□□□ -1.34
TPM3-213ENST00000368545 CLEC19AQ6UXS0 136 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 RPUSD4Q96CM3 377 aaKnown RBP6.7□□□□□ -1.34
TPM3-213ENST00000368545 CHRDL1Q9BU40 450 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 GSN-AS1Q9NRJ2 163 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 RABAC1Q9UI14 185 aa6.7□□□□□ -1.34
TPM3-213ENST00000368545 BTN1A1Q13410 526 aa6.69□□□□□ -1.34
TPM3-213ENST00000368545 IGFL4Q6B9Z1 124 aa6.69□□□□□ -1.34
TPM3-213ENST00000368545 Q8N2B8 174 aa6.69□□□□□ -1.34
TPM3-213ENST00000368545 OR4F17Q8NGA8 305 aa6.69□□□□□ -1.34
TPM3-213ENST00000368545 ZNF702PQ9H963 129 aa6.69□□□□□ -1.34
TPM3-213ENST00000368545 GNB4Q9HAV0 340 aa6.69□□□□□ -1.34
TPM3-213ENST00000368545 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.68□□□□□ -1.34
TPM3-213ENST00000368545 ZNF98A6NK75 572 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 GGTLC3B5MD39 225 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 NBEAP1P0C6P0 100 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 HIST1H1EP10412 219 aaKnown RBP6.68□□□□□ -1.34
TPM3-213ENST00000368545 PSMB8P28062 276 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 SSTP61278 116 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 TMEM241Q24JQ0 296 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 ZNF343Q6P1L6 599 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 STHQ8IWL8 128 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 TPPP3Q9BW30 176 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 SDF2L1Q9HCN8 221 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 RPS10P5Q9NQ39 176 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 A0A087WWC5 75 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 C7orf77A4D0Y5 90 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 RPL7P18124 248 aaKnown RBP6.68□□□□□ -1.34
TPM3-213ENST00000368545 PDE6HQ13956 83 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 LEMD1Q68G75 181 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 TOMM20LQ6UXN7 152 aa6.68□□□□□ -1.34
TPM3-213ENST00000368545 ANK3Q12955 4377 aaKnown RBP6.68□□□□□ -1.34
TPM3-213ENST00000368545 DNAJC9-AS1A6NH13 148 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 NPPCP23582 126 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 LYPD1Q8N2G4 141 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 GPR82Q96P67 336 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 SPAG8Q99932 426 aaPredicted RBP6.67□□□□□ -1.34
TPM3-213ENST00000368545 C20orf24Q9BUV8 137 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 SMCO4Q9NRQ5 59 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 A0A0U1RRA0 63 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 C9JCJ5 164 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 DNASE2O00115 360 aaPredicted RBP6.67□□□□□ -1.34
TPM3-213ENST00000368545 NDUFA4O00483 81 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 IGLC2P0DOY2 106 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 MYCNOSP40205 109 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 ZNF329Q86UD4 541 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 BLNKQ8WV28 456 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 HIST1H2BAQ96A08 127 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 METTL26Q96S19 204 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 LY96Q9Y6Y9 160 aa6.67□□□□□ -1.34
TPM3-213ENST00000368545 TRBV19A0A075B6N1 114 aa6.66□□□□□ -1.34
TPM3-213ENST00000368545 PCP4L1A6NKN8 68 aa6.66□□□□□ -1.34
TPM3-213ENST00000368545 PPP5D1E7EU14 171 aa6.66□□□□□ -1.34
TPM3-213ENST00000368545 NDUFA7O95182 113 aa6.66□□□□□ -1.34
TPM3-213ENST00000368545 CRYBB3P26998 211 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms