RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 A0A1W2PPM0 123 aa0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 H7BYZ3 331 aa0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 IFNA4P05014 189 aa0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 FOXI2Q6ZQN5 318 aa0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 ZCCHC23Q6ZST2 131 aa0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 ANGPTL5Q86XS5 388 aa0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 STX19Q8N4C7 294 aa0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 FAM216BQ8N7L0 139 aa0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 OR10AG1Q8NH19 301 aa0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 ZNF431Q8TF32 576 aaPredicted RBP0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 BORCS8Q96FH0 119 aa0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 OR2H1Q9GZK4 316 aa0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 MED11Q9P086 117 aa0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 PIK3C2AO00443 1686 aa0.49□□□□□ -2.33
ECHDC1-201ENST00000368287 MUC5BQ9HC84 5762 aaPredicted RBP0.49□□□□□ -2.33
ECHDC1-201ENST00000368287 TECPR2O15040 1411 aa0.49□□□□□ -2.33
ECHDC1-201ENST00000368287 IGLV3-1P01715 115 aa0.49□□□□□ -2.33
ECHDC1-201ENST00000368287 TCTAP57738 103 aa0.49□□□□□ -2.33
ECHDC1-201ENST00000368287 C3orf33Q6P1S2 294 aa0.49□□□□□ -2.33
ECHDC1-201ENST00000368287 LINC00269Q8N2A0 174 aa0.49□□□□□ -2.33
ECHDC1-201ENST00000368287 FAM24BQ8N5W8 94 aa0.49□□□□□ -2.33
ECHDC1-201ENST00000368287 DYDC1Q8WWB3 177 aa0.49□□□□□ -2.33
ECHDC1-201ENST00000368287 BIN3Q9NQY0 253 aa0.49□□□□□ -2.33
ECHDC1-201ENST00000368287 ASH1LQ9NR48 2969 aaKnown RBP0.49□□□□□ -2.33
ECHDC1-201ENST00000368287 SYNMO15061 1565 aa0.49□□□□□ -2.33
ECHDC1-201ENST00000368287 ERBINQ96RT1 1412 aa0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 GPR31O00270 319 aa0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 CST7O76096 145 aa0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 MT-ND6P03923 174 aa0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 SERPINB1P30740 379 aa0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 RPL35P42766 123 aaKnown RBP0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 CIRBPQ14011 172 aaKnown RBP0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 SPATA45Q537H7 98 aa0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 LINC00575Q6W349 94 aa0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 PRR15Q8IV56 129 aa0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 OR10AC1Q8NH08 325 aa0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 BOLA2Q9H3K6 86 aa0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 LRTM1Q9HBL6 345 aa0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 NIT2Q9NQR4 276 aa0.48□□□□□ -2.33
ECHDC1-201ENST00000368287 BCL9O00512 1426 aa0.47□□□□□ -2.33
ECHDC1-201ENST00000368287 RTL9Q8NET4 1388 aa0.47□□□□□ -2.33
ECHDC1-201ENST00000368287 NUPR2A6NF83 97 aa0.47□□□□□ -2.33
ECHDC1-201ENST00000368287 LYRM1O43325 122 aa0.47□□□□□ -2.33
ECHDC1-201ENST00000368287 FXYD4P59646 89 aa0.47□□□□□ -2.33
ECHDC1-201ENST00000368287 VBP1P61758 197 aa0.47□□□□□ -2.33
ECHDC1-201ENST00000368287 DIAPH2-AS1Q14236 149 aa0.47□□□□□ -2.33
ECHDC1-201ENST00000368287 VMA21Q3ZAQ7 101 aa0.47□□□□□ -2.33
ECHDC1-201ENST00000368287 DCUN1D2Q6PH85 259 aa0.47□□□□□ -2.33
ECHDC1-201ENST00000368287 IL20Q9NYY1 176 aa0.47□□□□□ -2.33
ECHDC1-201ENST00000368287 NAT8BQ9UHF3 227 aa0.47□□□□□ -2.33
ECHDC1-201ENST00000368287 FRAS1Q86XX4 4008 aa0.47□□□□□ -2.33
ECHDC1-201ENST00000368287 A0A0D9SG42 100 aa0.46□□□□□ -2.34
ECHDC1-201ENST00000368287 TRDV1A0A1B0GX56 115 aa0.46□□□□□ -2.34
ECHDC1-201ENST00000368287 MAP1LC3B2A6NCE7 125 aa0.46□□□□□ -2.34
ECHDC1-201ENST00000368287 E5RI56 91 aa0.46□□□□□ -2.34
ECHDC1-201ENST00000368287 GABARAPH6UMI1 98 aa0.46□□□□□ -2.34
ECHDC1-201ENST00000368287 OCIAD2Q56VL3 154 aa0.46□□□□□ -2.34
ECHDC1-201ENST00000368287 TRIQKQ629K1 86 aa0.46□□□□□ -2.34
ECHDC1-201ENST00000368287 SPATA8Q6RVD6 105 aa0.46□□□□□ -2.34
ECHDC1-201ENST00000368287 C10orf95Q9H7T3 257 aa0.46□□□□□ -2.34
ECHDC1-201ENST00000368287 NUBP2Q9Y5Y2 271 aa0.46□□□□□ -2.34
ECHDC1-201ENST00000368287 APCP25054 2843 aa0.45□□□□□ -2.34
ECHDC1-201ENST00000368287 A0A096LPI6 279 aa0.45□□□□□ -2.34
ECHDC1-201ENST00000368287 PPP5D1E7EU14 171 aa0.45□□□□□ -2.34
ECHDC1-201ENST00000368287 H3BQV1 296 aa0.45□□□□□ -2.34
ECHDC1-201ENST00000368287 K7EIL1 84 aa0.45□□□□□ -2.34
ECHDC1-201ENST00000368287 KPNA4O00629 521 aaPredicted RBP0.45□□□□□ -2.34
ECHDC1-201ENST00000368287 FABP2P12104 132 aa0.45□□□□□ -2.34
ECHDC1-201ENST00000368287 TMEM78Q5T7P6 136 aa0.45□□□□□ -2.34
ECHDC1-201ENST00000368287 CCL4L1Q8NHW4 92 aa0.45□□□□□ -2.34
ECHDC1-201ENST00000368287 DIRC1Q969H9 104 aa0.45□□□□□ -2.34
ECHDC1-201ENST00000368287 CST11Q9H112 138 aa0.45□□□□□ -2.34
ECHDC1-201ENST00000368287 TPRKBQ9Y3C4 175 aa0.45□□□□□ -2.34
ECHDC1-201ENST00000368287 IGHV3-33P01772 117 aa0.44□□□□□ -2.34
ECHDC1-201ENST00000368287 FABP4P15090 132 aa0.44□□□□□ -2.34
ECHDC1-201ENST00000368287 S100A11P31949 105 aa0.44□□□□□ -2.34
ECHDC1-201ENST00000368287 HRCT1Q6UXD1 115 aa0.44□□□□□ -2.34
ECHDC1-201ENST00000368287 CROCCP2Q86T23 111 aa0.44□□□□□ -2.34
ECHDC1-201ENST00000368287 STX12Q86Y82 276 aa0.44□□□□□ -2.34
ECHDC1-201ENST00000368287 OR4C12Q96R67 309 aa0.44□□□□□ -2.34
ECHDC1-201ENST00000368287 PCBD2Q9H0N5 130 aa0.44□□□□□ -2.34
ECHDC1-201ENST00000368287 TCEAL2Q9H3H9 227 aaPredicted RBP0.44□□□□□ -2.34
ECHDC1-201ENST00000368287 YTHDC2Q9H6S0 1430 aaKnown RBP0.44□□□□□ -2.34
ECHDC1-201ENST00000368287 ANK1P16157 1881 aa0.44□□□□□ -2.34
ECHDC1-201ENST00000368287 CTTNBP2Q8WZ74 1663 aa0.43□□□□□ -2.34
ECHDC1-201ENST00000368287 A0A1W2PRE2 83 aa0.43□□□□□ -2.34
ECHDC1-201ENST00000368287 Q86TA4 180 aa0.43□□□□□ -2.34
ECHDC1-201ENST00000368287 RMND5BQ96G75 393 aaPredicted RBP0.43□□□□□ -2.34
ECHDC1-201ENST00000368287 TRAPPC8Q9Y2L5 1435 aa0.43□□□□□ -2.34
ECHDC1-201ENST00000368287 USP54Q70EL1 1684 aa0.43□□□□□ -2.34
ECHDC1-201ENST00000368287 KNTC1P50748 2209 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 TRPM7Q96QT4 1865 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 TRBV30A0A0K0K1B3 111 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 ZNF727A8MUV8 499 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 RPL37AP61513 92 aaKnown RBP0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 MRPS36P82909 103 aaKnown RBP0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 NEDD8Q15843 81 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 TEX29Q8N6K0 151 aa0.42□□□□□ -2.34
ECHDC1-201ENST00000368287 OR5H6Q8NGV6 325 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms