RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 GTSF1Q8WW33 167 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 Q9H3A6 140 aa9.12□□□□□ -0.95
USF1-201ENST00000368019 TNFRSF13BO14836 293 aaPredicted RBP9.11□□□□□ -0.95
USF1-201ENST00000368019 TAX1BP3O14907 124 aa9.11□□□□□ -0.95
USF1-201ENST00000368019 CRYGBP07316 175 aa9.11□□□□□ -0.95
USF1-201ENST00000368019 GNG5P63218 68 aa9.11□□□□□ -0.95
USF1-201ENST00000368019 SEC11AP67812 179 aa9.11□□□□□ -0.95
USF1-201ENST00000368019 SSBP2P81877 361 aaPredicted RBP9.11□□□□□ -0.95
USF1-201ENST00000368019 COTL1Q14019 142 aa9.11□□□□□ -0.95
USF1-201ENST00000368019 MAJINQ3KP22 176 aa9.11□□□□□ -0.95
USF1-201ENST00000368019 FAM201AQ5SY85 155 aa9.11□□□□□ -0.95
USF1-201ENST00000368019 PRR27Q6MZM9 219 aa9.11□□□□□ -0.95
USF1-201ENST00000368019 TMEM75Q8N9X5 138 aa9.11□□□□□ -0.95
USF1-201ENST00000368019 NEU4Q8WWR8 484 aaPredicted RBP9.11□□□□□ -0.95
USF1-201ENST00000368019 NPFFR1Q9GZQ6 430 aa9.11□□□□□ -0.95
USF1-201ENST00000368019 RAB1BQ9H0U4 201 aa9.11□□□□□ -0.95
USF1-201ENST00000368019 KAAG1Q9UBP8 84 aa9.11□□□□□ -0.95
USF1-201ENST00000368019 PPIAL4AQ9Y536 164 aa9.11□□□□□ -0.95
USF1-201ENST00000368019 E7EUB6 86 aa9.1□□□□□ -0.95
USF1-201ENST00000368019 COL8A2P25067 703 aa9.1□□□□□ -0.95
USF1-201ENST00000368019 GPR6P46095 362 aaPredicted RBP9.1□□□□□ -0.95
USF1-201ENST00000368019 RPL27AP46776 148 aaKnown RBP9.1□□□□□ -0.95
USF1-201ENST00000368019 DUX4L9Q6RFH8 374 aaPredicted RBP9.1□□□□□ -0.95
USF1-201ENST00000368019 VHLLQ6RSH7 139 aa9.1□□□□□ -0.95
USF1-201ENST00000368019 TCF24Q7RTU0 167 aa9.1□□□□□ -0.95
USF1-201ENST00000368019 OR1N2Q8NGR9 330 aa9.1□□□□□ -0.95
USF1-201ENST00000368019 RNF5Q99942 180 aa9.1□□□□□ -0.95
USF1-201ENST00000368019 SSBP4Q9BWG4 385 aaPredicted RBP9.1□□□□□ -0.95
USF1-201ENST00000368019 CLEC5AQ9NY25 188 aa9.1□□□□□ -0.95
USF1-201ENST00000368019 HIGD1AQ9Y241 93 aa9.1□□□□□ -0.95
USF1-201ENST00000368019 WNK2Q9Y3S1 2297 aa9.1□□□□□ -0.95
USF1-201ENST00000368019 A0A1B0GUT8 65 aa9.09□□□□□ -0.95
USF1-201ENST00000368019 SERTM2A0A1B0GWG4 89 aa9.09□□□□□ -0.95
USF1-201ENST00000368019 FBLL1A6NHQ2 334 aaKnown RBP9.09□□□□□ -0.95
USF1-201ENST00000368019 COX8AP10176 69 aa9.09□□□□□ -0.95
USF1-201ENST00000368019 CSN1S1P47710 185 aa9.09□□□□□ -0.95
USF1-201ENST00000368019 DLX6P56179 175 aa9.09□□□□□ -0.95
USF1-201ENST00000368019 MRGPRG-AS1Q2M3A8 158 aa9.09□□□□□ -0.95
USF1-201ENST00000368019 ZNF493Q6ZR52 646 aa9.09□□□□□ -0.95
USF1-201ENST00000368019 KIR3DL3Q8N743 410 aa9.09□□□□□ -0.95
USF1-201ENST00000368019 OR1B1Q8NGR6 318 aa9.09□□□□□ -0.95
USF1-201ENST00000368019 MRPL36Q9P0J6 103 aaKnown RBP9.09□□□□□ -0.95
USF1-201ENST00000368019 PEF1Q9UBV8 284 aaKnown RBP9.09□□□□□ -0.95
USF1-201ENST00000368019 PPIAL4EA0A075B759 164 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 C17orf100A8MU93 164 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 PPIAL4DF5H284 164 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 K7EQM0 130 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 SIVA1O15304 175 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 NDUFB3O43676 98 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 IGLV2-11P01706 119 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 PPIAL4FP0DN26 164 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 CEACAM3P40198 252 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 VAMP3Q15836 100 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 TMEM155Q4W5P6 130 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 MPV17L2Q567V2 206 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 TMEM200BQ69YZ2 307 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 LINC00322Q6ZN03 302 aaPredicted RBP9.08□□□□□ -0.96
USF1-201ENST00000368019 S100A7AQ86SG5 101 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 LINC01356Q8N9X3 169 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 OR10AG1Q8NH19 301 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 PGLYRP4Q96LB8 373 aa9.08□□□□□ -0.96
USF1-201ENST00000368019 F11RQ9Y624 299 aaKnown RBP9.08□□□□□ -0.96
USF1-201ENST00000368019 VSTM5A8MXK1 200 aa9.07□□□□□ -0.96
USF1-201ENST00000368019 TMEM178BH3BS89 294 aa9.07□□□□□ -0.96
USF1-201ENST00000368019 NUDT3O95989 172 aa9.07□□□□□ -0.96
USF1-201ENST00000368019 ORM2P19652 201 aa9.07□□□□□ -0.96
USF1-201ENST00000368019 COX8CQ7Z4L0 72 aa9.07□□□□□ -0.96
USF1-201ENST00000368019 DEFB108BQ8NET1 73 aa9.07□□□□□ -0.96
USF1-201ENST00000368019 ZNF747Q9BV97 191 aa9.07□□□□□ -0.96
USF1-201ENST00000368019 AP5S1Q9NUS5 200 aa9.07□□□□□ -0.96
USF1-201ENST00000368019 PKD1L1Q8TDX9 2849 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 LYNX1G3V0Z9 82 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 SLC25A17O43808 307 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 RBP4P02753 201 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 IGLC1P0CG04 106 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 LYNX1P0DP58 116 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 CCL3L1P16619 93 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 HTR1DP28221 377 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 GPR183P32249 361 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 LGALS9BQ3B8N2 356 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 LINC01559Q495D7 138 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 C10orf55Q5SWW7 151 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 LGALS9CQ6DKI2 356 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 SMIM15Q7Z3B0 74 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 PIFOQ8TCI5 191 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 BLNKQ8WV28 456 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 U3KQK5 164 aa9.06□□□□□ -0.96
USF1-201ENST00000368019 hDV102S1A0JD36 115 aa9.05□□□□□ -0.96
USF1-201ENST00000368019 SH2D7A6NKC9 451 aaPredicted RBP9.05□□□□□ -0.96
USF1-201ENST00000368019 H3BRN7 92 aa9.05□□□□□ -0.96
USF1-201ENST00000368019 PDE6HQ13956 83 aa9.05□□□□□ -0.96
USF1-201ENST00000368019 BPIFA4PQ86YQ2 179 aa9.05□□□□□ -0.96
USF1-201ENST00000368019 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.05□□□□□ -0.96
USF1-201ENST00000368019 OR9G4Q8NGQ1 327 aa9.05□□□□□ -0.96
USF1-201ENST00000368019 ZNF48Q96MX3 618 aaPredicted RBP9.05□□□□□ -0.96
USF1-201ENST00000368019 SHANK2-AS3Q9BTD1 123 aa9.05□□□□□ -0.96
USF1-201ENST00000368019 SLC25A39Q9BZJ4 359 aaPredicted RBP9.05□□□□□ -0.96
USF1-201ENST00000368019 CST9LQ9H4G1 147 aa9.05□□□□□ -0.96
USF1-201ENST00000368019 DYNLRB1Q9NP97 96 aa9.05□□□□□ -0.96
USF1-201ENST00000368019 ZNRD1Q9P1U0 126 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms