RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 TMEM126AQ9H061 195 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 A0A087WV48 116 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 LCN12Q6JVE5 192 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 C1QTNF4Q9BXJ3 329 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 EPOPA6NHQ4 379 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 IFITM1P13164 125 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 CEACAM8P31997 349 aaPredicted RBP5.99□□□□□ -1.45
SYNE1-208ENST00000367256 SMKR1H3BMG3 65 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 ATP6V0BQ99437 205 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 MUC4Q99102 2169 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 TCF15Q12870 199 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 Q86TA4 180 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 C11orf44Q8N8P7 122 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 LY6G5BQ8NDX9 201 aa5.99□□□□□ -1.45
SYNE1-208ENST00000367256 RPUSD1Q9UJJ7 312 aaKnown RBP5.99□□□□□ -1.45
SYNE1-208ENST00000367256 CACNA1AO00555 2505 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 CRLF1O75462 422 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 NDUFC2O95298 119 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 TMEM256Q8N2U0 113 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 SONP18583 2426 aaKnown RBP5.98□□□□□ -1.45
SYNE1-208ENST00000367256 C9orf118A6NHY6 69 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 PRSS47A8MTI9 375 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 FCN3O75636 299 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 hADV29S1A0JD25 119 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 DSCR9P59020 149 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 C9orf139Q6ZV77 190 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 TNRC6BQ9UPQ9 1833 aaKnown RBP5.98□□□□□ -1.45
SYNE1-208ENST00000367256 MRPL14Q6P1L8 145 aaKnown RBP5.98□□□□□ -1.45
SYNE1-208ENST00000367256 CSPG4Q6UVK1 2322 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 A0A1W2PR77 199 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 TCTEX1D4Q5JR98 221 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 COL4A1P02462 1669 aa5.98□□□□□ -1.45
SYNE1-208ENST00000367256 IGHV1-3A0A0C4DH29 117 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 IGHV1-8P0DP01 117 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 DSCR8Q96T75 97 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 SRRM5B3KS81 715 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 ZNF561-AS1K7EIQ3 104 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 TMEM141Q96I45 108 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 COLQQ9Y215 455 aaPredicted RBP5.97□□□□□ -1.45
SYNE1-208ENST00000367256 PTPN13Q12923 2485 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 LOC102723996A0A087X1L8 192 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 IGHV1-24A0A0C4DH33 117 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 TGFBR3LH3BV60 316 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 QRFPP83859 136 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 TAL2Q16559 108 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 TRPT1Q86TN4 253 aaKnown RBP5.97□□□□□ -1.45
SYNE1-208ENST00000367256 KLHL30-AS1Q8NEE0 82 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 USMG5Q96IX5 58 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 LINC00477Q96M19 166 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 IGHV1-18A0A0C4DH31 117 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 IGHG3P01860 377 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 TMEM75Q8N9X5 138 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 UTF1Q5T230 341 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 MESP1Q9BRJ9 268 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 H0YJW9 148 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 K7EP34 96 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 TP53TG1Q9Y2A0 90 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 IGHV1-46P01743 117 aa5.97□□□□□ -1.45
SYNE1-208ENST00000367256 KIAA1671Q9BY89 1806 aa5.96□□□□□ -1.45
SYNE1-208ENST00000367256 IGKV1D-8A0A087WSZ0 117 aa5.96□□□□□ -1.45
SYNE1-208ENST00000367256 LYNX1G3V0Z9 82 aa5.96□□□□□ -1.45
SYNE1-208ENST00000367256 LYNX1P0DP58 116 aa5.96□□□□□ -1.45
SYNE1-208ENST00000367256 LINC00527Q9UJ94 153 aa5.96□□□□□ -1.45
SYNE1-208ENST00000367256 POLR3KQ9Y2Y1 108 aaPredicted RBP5.96□□□□□ -1.45
SYNE1-208ENST00000367256 IGHV2-5P01817 119 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 DEFB130BP0DP73 79 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 DEFB130AP0DP74 79 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 KLRD1Q13241 179 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 ZC2HC1BQ5TFG8 222 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 OR11H6Q8NGC7 330 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 UBL5Q9BZL1 73 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 SPRR3Q9UBC9 169 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 IGKV1-5P01602 117 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 TMEM200BQ69YZ2 307 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 ADCYAP1P18509 176 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 FAM231DQ6ZW35 169 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 SIVA1O15304 175 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 DAZ1Q9NQZ3 744 aaKnown RBP5.96□□□□□ -1.46
SYNE1-208ENST00000367256 MINOS1Q5TGZ0 78 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 PRSS57Q6UWY2 283 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 FGFBP3Q8TAT2 258 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 MSRB2Q9Y3D2 182 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 MINOS1-NBL1R4GNA1 71 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 I3L3M4 83 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 EREGO14944 169 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 IGHG4P01861 327 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 EGR2P11161 476 aaPredicted RBP5.96□□□□□ -1.46
SYNE1-208ENST00000367256 LINC01545Q5VT33 79 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 IL17RELQ6ZVW7 336 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 RFNGQ9Y644 331 aa5.96□□□□□ -1.46
SYNE1-208ENST00000367256 CSRP2Q16527 193 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 C5orf47Q569G3 176 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 BMPERQ8N8U9 685 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 MST1P26927 711 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 C10orf55Q5SWW7 151 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 AMN1Q8IY45 258 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 MYO9AB2RTY4 2548 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 SRSF2Q01130 221 aaKnown RBP5.95□□□□□ -1.46
SYNE1-208ENST00000367256 C5orf64Q2M2E5 130 aa5.95□□□□□ -1.46
SYNE1-208ENST00000367256 TRAV25A0A0B4J276 109 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms