RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 PKHD1L1Q86WI1 4243 aa-0.72□□□□□ -2.52
RNU6-1048P-201ENST00000364054 CPDO75976 1380 aa-0.72□□□□□ -2.53
RNU6-1048P-201ENST00000364054 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 NBPF19A0A087WUL8 3843 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 PLXNA2O75051 1894 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 FRMPD1Q5SYB0 1578 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 TRAV26-2A0A0B4J265 109 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 DUXBA0A1W2PPF3 345 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 ADAP1O75689 374 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 HLA-DRB1P01911 266 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 IVLP07476 585 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 RBP1P09455 135 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 SMIM10L2AP0DMW4 78 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 SMIM10L2BP0DMW5 78 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 PYYP10082 97 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 GCHFRP30047 84 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 AP3S2P59780 193 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 SNRPD2P62316 118 aaKnown RBP-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 RANP62826 216 aaKnown RBP-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 DCDP81605 110 aaKnown RBP-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 RSU1Q15404 277 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 BCL2L15Q5TBC7 163 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 DNM1P34Q6PK57 102 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 LRRN1Q6UXK5 716 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 PDZD9Q8IXQ8 264 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 OR4K15Q8NH41 348 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 C2orf50Q96LR7 162 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 UPF3BQ9BZI7 483 aaKnown RBP-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 TMEM126AQ9H061 195 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 TMEM133Q9H2Q1 129 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 C1orf109Q9NX04 203 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 FBXO5Q9UKT4 447 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 GVINP1Q7Z2Y8 2422 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 USP9XQ93008 2570 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 WNK3Q9BYP7 1800 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 ARAP1Q96P48 1450 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 WDR7Q9Y4E6 1490 aa-0.73□□□□□ -2.53
RNU6-1048P-201ENST00000364054 LAMA3Q16787 3333 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 TACC2O95359 2948 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 ZNF142P52746 1687 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 KDM3BQ7LBC6 1761 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 N4BP2Q86UW6 1770 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 FXYD6-FXYD2A0A087WZ82 144 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 TEX49A0A1B0GTD5 131 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 MKRN2OSH3BPM6 223 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 APOC4-APOC2K7ER74 178 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 SPINK4O60575 86 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 CRYZL1O95825 349 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 ORM1P02763 201 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 COX4I1P13073 169 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 SDC4P31431 198 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 PHBP35232 272 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 RPL5P46777 297 aaKnown RBP-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 CLDN12P56749 244 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 NAA20P61599 178 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 EMX2Q04743 252 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 AESQ08117 197 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 KLRD1Q13241 179 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 SLAMF1Q13291 335 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 PMAIP1Q13794 54 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 DIAPH2-AS1Q14236 149 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 ZNHIT3Q15649 155 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 DEFB135Q30KP9 77 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 FAM74A4Q5TZK3 123 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 CST9Q5W186 159 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 CSAG1Q6PB30 78 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 IZUMO2Q6UXV1 221 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 Q6ZRX8 168 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 GOLT1AQ6ZVE7 132 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 COMMD7Q86VX2 200 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 CD302Q8IX05 232 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 C20orf196Q8IYI0 205 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 C12orf45Q8N5I9 185 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 CHCHD1Q96BP2 118 aaKnown RBP-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 SMIM19Q96E16 107 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 DMAC1Q96GE9 116 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 TMEM141Q96I45 108 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 TREM1Q9NP99 234 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 BET1LQ9NYM9 111 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 MRPL36Q9P0J6 103 aaKnown RBP-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 MUC17Q685J3 4493 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 DNAH3Q8TD57 4116 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 GOLGA3Q08378 1498 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 USF3Q68DE3 2245 aa-0.74□□□□□ -2.53
RNU6-1048P-201ENST00000364054 PAPPAQ13219 1627 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 PLCE1Q9P212 2302 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 KDM5AP29375 1690 aaKnown RBP-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 AKAP11Q9UKA4 1901 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 TRGV1A0A0A0MS02 117 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 TRBV10-3A0A0K0K1G6 114 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 LOC107984640A0A0U1RRK4 108 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 TINCRA0A1B0GVN0 87 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 BBIP1A8MTZ0 92 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 TMEM14DPA8MWL7 114 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 EEF1E1-BLOC1S5C9J1V9 151 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 LRRN3E7EW58 273 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 H0Y980 276 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 BIRC5O15392 142 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 LYRM1O43325 122 aa-0.75□□□□□ -2.53
RNU6-1048P-201ENST00000364054 TPST1O60507 370 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms