RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 PARD6GQ9BYG4 376 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-553P-201ENST00000364047 LAMA3Q16787 3333 aa-0.7□□□□□ -2.52
RNU6-553P-201ENST00000364047 USP9XQ93008 2570 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-553P-201ENST00000364047 PDZD2O15018 2839 aa-0.7□□□□□ -2.52
RNU6-553P-201ENST00000364047 JMJD1CQ15652 2540 aa-0.71□□□□□ -2.52
RNU6-553P-201ENST00000364047 MYO15AQ9UKN7 3530 aa-0.71□□□□□ -2.52
RNU6-553P-201ENST00000364047 RPP14O95059 124 aaKnown RBP-0.71□□□□□ -2.52
RNU6-553P-201ENST00000364047 IGHV3-33P01772 117 aa-0.71□□□□□ -2.52
RNU6-553P-201ENST00000364047 RPS17P08708 135 aaKnown RBP-0.71□□□□□ -2.52
RNU6-553P-201ENST00000364047 ANGPTL5Q86XS5 388 aa-0.71□□□□□ -2.52
RNU6-553P-201ENST00000364047 C10orf111Q8N326 155 aa-0.71□□□□□ -2.52
RNU6-553P-201ENST00000364047 LPAR5Q9H1C0 372 aa-0.71□□□□□ -2.52
RNU6-553P-201ENST00000364047 KNTC1P50748 2209 aa-0.71□□□□□ -2.52
RNU6-553P-201ENST00000364047 FREM3P0C091 2139 aa-0.71□□□□□ -2.52
RNU6-553P-201ENST00000364047 ZGRF1Q86YA3 2104 aa-0.71□□□□□ -2.52
RNU6-553P-201ENST00000364047 ANKRD11Q6UB99 2663 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-553P-201ENST00000364047 hDV103S1A0JD37 113 aa-0.72□□□□□ -2.52
RNU6-553P-201ENST00000364047 PDE6GP18545 87 aa-0.72□□□□□ -2.52
RNU6-553P-201ENST00000364047 ZNF714Q96N38 554 aa-0.72□□□□□ -2.52
RNU6-553P-201ENST00000364047 ABCA12Q86UK0 2595 aa-0.73□□□□□ -2.53
RNU6-553P-201ENST00000364047 EPG5Q9HCE0 2579 aa-0.73□□□□□ -2.53
RNU6-553P-201ENST00000364047 A0A0J9YY99 117 aa-0.73□□□□□ -2.53
RNU6-553P-201ENST00000364047 HAND1O96004 215 aa-0.73□□□□□ -2.53
RNU6-553P-201ENST00000364047 IFNA7P01567 189 aa-0.73□□□□□ -2.53
RNU6-553P-201ENST00000364047 MIR22HGQ0VDD5 57 aa-0.73□□□□□ -2.53
RNU6-553P-201ENST00000364047 POPDC3Q9HBV1 291 aa-0.73□□□□□ -2.53
RNU6-553P-201ENST00000364047 MIA2Q96PC5 1412 aa-0.73□□□□□ -2.53
RNU6-553P-201ENST00000364047 MGAM2Q2M2H8 2515 aa-0.74□□□□□ -2.53
RNU6-553P-201ENST00000364047 CEBPGP53567 150 aa-0.74□□□□□ -2.53
RNU6-553P-201ENST00000364047 RPL37P61927 97 aaKnown RBP-0.74□□□□□ -2.53
RNU6-553P-201ENST00000364047 FOXI2Q6ZQN5 318 aa-0.74□□□□□ -2.53
RNU6-553P-201ENST00000364047 ZHX1-C8orf76Q96EF9 292 aa-0.74□□□□□ -2.53
RNU6-553P-201ENST00000364047 PROK2Q9HC23 129 aa-0.74□□□□□ -2.53
RNU6-553P-201ENST00000364047 FLGP20930 4061 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-553P-201ENST00000364047 CCDC144AA2RUR9 1427 aa-0.74□□□□□ -2.53
RNU6-553P-201ENST00000364047 KDM6BO15054 1643 aa-0.75□□□□□ -2.53
RNU6-553P-201ENST00000364047 SETXQ7Z333 2677 aaKnown RBP-0.75□□□□□ -2.53
RNU6-553P-201ENST00000364047 NIPBLQ6KC79 2804 aaeCLIP-0.75□□□□□ -2.53
RNU6-553P-201ENST00000364047 PRORSD1PA6NEY8 169 aa-0.75□□□□□ -2.53
RNU6-553P-201ENST00000364047 SULT1C4O75897 302 aa-0.75□□□□□ -2.53
RNU6-553P-201ENST00000364047 TCRBP04435 133 aa-0.75□□□□□ -2.53
RNU6-553P-201ENST00000364047 LSM6P62312 80 aaKnown RBP-0.75□□□□□ -2.53
RNU6-553P-201ENST00000364047 KLRD1Q13241 179 aa-0.75□□□□□ -2.53
RNU6-553P-201ENST00000364047 PLEKHB2Q96CS7 222 aa-0.75□□□□□ -2.53
RNU6-553P-201ENST00000364047 ARL5BQ96KC2 179 aa-0.75□□□□□ -2.53
RNU6-553P-201ENST00000364047 SIGMAR1Q99720 223 aa-0.75□□□□□ -2.53
RNU6-553P-201ENST00000364047 WDR87Q6ZQQ6 2873 aa-0.75□□□□□ -2.53
RNU6-553P-201ENST00000364047 LAMA1P25391 3075 aa-0.75□□□□□ -2.53
RNU6-553P-201ENST00000364047 CACNA1CQ13936 2221 aa-0.76□□□□□ -2.53
RNU6-553P-201ENST00000364047 NBPF19A0A087WUL8 3843 aa-0.76□□□□□ -2.53
RNU6-553P-201ENST00000364047 CRHP06850 196 aa-0.76□□□□□ -2.53
RNU6-553P-201ENST00000364047 NFYBP25208 207 aa-0.76□□□□□ -2.53
RNU6-553P-201ENST00000364047 GLYATL3Q5SZD4 288 aa-0.76□□□□□ -2.53
RNU6-553P-201ENST00000364047 CACYBPQ9HB71 228 aaKnown RBP-0.76□□□□□ -2.53
RNU6-553P-201ENST00000364047 COL24A1Q17RW2 1714 aa-0.76□□□□□ -2.53
RNU6-553P-201ENST00000364047 SPTBP11277 2137 aa-0.76□□□□□ -2.53
RNU6-553P-201ENST00000364047 BPTFQ12830 3046 aa-0.76□□□□□ -2.53
RNU6-553P-201ENST00000364047 CACNA1HO95180 2353 aa-0.77□□□□□ -2.53
RNU6-553P-201ENST00000364047 CEP164Q9UPV0 1460 aa-0.77□□□□□ -2.53
RNU6-553P-201ENST00000364047 DUXBA0A1W2PPF3 345 aa-0.77□□□□□ -2.53
RNU6-553P-201ENST00000364047 A6NN06 94 aa-0.77□□□□□ -2.53
RNU6-553P-201ENST00000364047 MALSU1Q96EH3 234 aa-0.77□□□□□ -2.53
RNU6-553P-201ENST00000364047 BTF3L4Q96K17 158 aa-0.77□□□□□ -2.53
RNU6-553P-201ENST00000364047 U3KQA8 63 aa-0.77□□□□□ -2.53
RNU6-553P-201ENST00000364047 ATRQ13535 2644 aa-0.77□□□□□ -2.53
RNU6-553P-201ENST00000364047 HMGB3O15347 200 aaKnown RBP-0.78□□□□□ -2.53
RNU6-553P-201ENST00000364047 XAF1Q6GPH4 301 aa-0.78□□□□□ -2.53
RNU6-553P-201ENST00000364047 GOLT1AQ6ZVE7 132 aa-0.78□□□□□ -2.53
RNU6-553P-201ENST00000364047 C5orf17Q8NAS9 161 aa-0.78□□□□□ -2.53
RNU6-553P-201ENST00000364047 PPTC7Q8NI37 304 aa-0.78□□□□□ -2.53
RNU6-553P-201ENST00000364047 NMNAT1Q9HAN9 279 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-553P-201ENST00000364047 ZNF292O60281 2723 aa-0.79□□□□□ -2.54
RNU6-553P-201ENST00000364047 ZFYVE9O95405 1425 aa-0.79□□□□□ -2.54
RNU6-553P-201ENST00000364047 ADCY9O60503 1353 aa-0.79□□□□□ -2.54
RNU6-553P-201ENST00000364047 NF1P21359 2839 aa-0.79□□□□□ -2.54
RNU6-553P-201ENST00000364047 TMBIM6P55061 237 aa-0.79□□□□□ -2.54
RNU6-553P-201ENST00000364047 ARPP19P56211 112 aa-0.79□□□□□ -2.54
RNU6-553P-201ENST00000364047 PTRHD1Q6GMV3 140 aaKnown RBP-0.79□□□□□ -2.54
RNU6-553P-201ENST00000364047 LYSTQ99698 3801 aa-0.79□□□□□ -2.54
RNU6-553P-201ENST00000364047 BCORL1Q5H9F3 1711 aa-0.79□□□□□ -2.54
RNU6-553P-201ENST00000364047 HECTD4Q9Y4D8 3996 aa-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 PRRC2CQ9Y520 2896 aaKnown RBP-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 MAP1BP46821 2468 aaKnown RBP-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 RER1O15258 196 aa-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 LYRM1O43325 122 aa-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 IGHV3-30P01768 117 aa-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 IFNA4P05014 189 aa-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 CXCL1P09341 107 aa-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 IGHV3-30-5P0DP03 117 aa-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 IDO1P14902 403 aa-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 VMO1Q7Z5L0 202 aa-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 IFT20Q8IY31 132 aa-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 OR10X1Q8NGY0 326 aa-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 CST11Q9H112 138 aa-0.8□□□□□ -2.54
RNU6-553P-201ENST00000364047 CUBNO60494 3623 aa-0.81□□□□□ -2.54
RNU6-553P-201ENST00000364047 FLNBO75369 2602 aaKnown RBP-0.81□□□□□ -2.54
RNU6-553P-201ENST00000364047 BANF1O75531 89 aa-0.81□□□□□ -2.54
RNU6-553P-201ENST00000364047 SPRR2DP22532 72 aa-0.81□□□□□ -2.54
RNU6-553P-201ENST00000364047 DIAPH2-AS1Q14236 149 aa-0.81□□□□□ -2.54
RNU6-553P-201ENST00000364047 TAF1AQ15573 450 aaPredicted RBP-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms