RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 Q86TA4 180 aa10.13□□□□□ -0.79
VAMP1-201ENST00000361716 RAB9BQ9NP90 201 aa10.13□□□□□ -0.79
VAMP1-201ENST00000361716 ANKHD1Q8IWZ3 2542 aaKnown RBP10.13□□□□□ -0.79
VAMP1-201ENST00000361716 PSMB2P49721 201 aa10.13□□□□□ -0.79
VAMP1-201ENST00000361716 RUSC1-AS1Q66K80 236 aa10.13□□□□□ -0.79
VAMP1-201ENST00000361716 PTH2Q96A98 100 aa10.13□□□□□ -0.79
VAMP1-201ENST00000361716 RNF183Q96D59 192 aa10.13□□□□□ -0.79
VAMP1-201ENST00000361716 DSCAMO60469 2012 aa10.12□□□□□ -0.79
VAMP1-201ENST00000361716 PRR33A8MZF0 331 aa10.12□□□□□ -0.79
VAMP1-201ENST00000361716 B5MCH6 92 aa10.12□□□□□ -0.79
VAMP1-201ENST00000361716 NDUFS7O75251 213 aa10.12□□□□□ -0.79
VAMP1-201ENST00000361716 ANAPC13Q9BS18 74 aa10.12□□□□□ -0.79
VAMP1-201ENST00000361716 C7orf69Q9H7B7 122 aa10.12□□□□□ -0.79
VAMP1-201ENST00000361716 HAX1O00165 279 aa10.12□□□□□ -0.79
VAMP1-201ENST00000361716 IGKV3-15P01624 115 aa10.12□□□□□ -0.79
VAMP1-201ENST00000361716 MT-ATP8P03928 68 aa10.12□□□□□ -0.79
VAMP1-201ENST00000361716 TCF15Q12870 199 aa10.12□□□□□ -0.79
VAMP1-201ENST00000361716 HES1Q14469 280 aa10.12□□□□□ -0.79
VAMP1-201ENST00000361716 PIP4P2Q8N4L2 257 aa10.12□□□□□ -0.79
VAMP1-201ENST00000361716 DDB2Q92466 427 aa10.12□□□□□ -0.79
VAMP1-201ENST00000361716 ARHGAP32A7KAX9 2087 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 TRBV25-1A0A075B6N4 114 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 NPYP01303 97 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 LGALS9BQ3B8N2 356 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 LGALS9CQ6DKI2 356 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 SLC25A48Q6ZT89 311 aaKnown RBP10.11□□□□□ -0.79
VAMP1-201ENST00000361716 PRR7Q8TB68 274 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 ZNF714Q96N38 554 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 C8orf49Q96NF6 230 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 ZFYVE26Q68DK2 2539 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 TMEM189A5PLL7 270 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 IGLL5B9A064 214 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 SCGB1A1P11684 91 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 CYSLTR1Q9Y271 337 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 TRAV40A0A0B4J280 105 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 PLA2G2CQ5R387 149 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 CACNG8Q8WXS5 425 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 PRSS22Q9GZN4 317 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 MRPL16Q9NX20 251 aaKnown RBP10.11□□□□□ -0.79
VAMP1-201ENST00000361716 HIGD1AQ9Y241 93 aa10.11□□□□□ -0.79
VAMP1-201ENST00000361716 C19orf71A6NCJ1 209 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 F8W1H4 67 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 FOXI2Q6ZQN5 318 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 PRSS33Q8NF86 280 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 MLST8Q9BVC4 326 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 A0A096LNJ9 63 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 TRAV17A0A0B4J275 112 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 LYNX1G3V0Z9 82 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 ORM1P02763 201 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 LYNX1P0DP58 116 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 DEFB104AQ8WTQ1 72 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 IGHV3-23P01764 117 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 CNTFRP26992 372 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 VMA21Q3ZAQ7 101 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 TTC9CQ8N5M4 171 aa10.1□□□□□ -0.79
VAMP1-201ENST00000361716 SCGB2A1O75556 95 aa10.09□□□□□ -0.79
VAMP1-201ENST00000361716 WT1P19544 449 aaPredicted RBP10.09□□□□□ -0.79
VAMP1-201ENST00000361716 MRPL51Q4U2R6 128 aaKnown RBP10.09□□□□□ -0.79
VAMP1-201ENST00000361716 RITA1Q96K30 269 aa10.09□□□□□ -0.79
VAMP1-201ENST00000361716 PTPRQQ9UMZ3 2332 aa10.09□□□□□ -0.79
VAMP1-201ENST00000361716 TMEM8BA6NDV4 472 aa10.09□□□□□ -0.79
VAMP1-201ENST00000361716 NDUFB3O43676 98 aa10.09□□□□□ -0.79
VAMP1-201ENST00000361716 GATA1P15976 413 aaPredicted RBP10.09□□□□□ -0.79
VAMP1-201ENST00000361716 KLF17Q5JT82 389 aaPredicted RBP10.09□□□□□ -0.79
VAMP1-201ENST00000361716 PRRG2O14669 202 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 IGKCP01834 107 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 C12orf74Q32Q52 190 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 IGFL4Q6B9Z1 124 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 C8orf86Q6ZUL3 223 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 CEND1Q8N111 149 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 SMPXQ9UHP9 88 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 PSG8Q9UQ74 426 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 COL27A1Q8IZC6 1860 aaPredicted RBP10.08□□□□□ -0.8
VAMP1-201ENST00000361716 IGHV3OR16-13A0A075B7E8 117 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 IGHV3-74A0A0B4J1X5 117 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 ARL3P36405 182 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 FBXL15Q9H469 300 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 ZNF71Q9NQZ8 489 aaPredicted RBP10.08□□□□□ -0.8
VAMP1-201ENST00000361716 IGHV1-46P01743 117 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 C3orf36Q3SXR2 165 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 GFRA4Q9GZZ7 299 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 PGPEP1Q9NXJ5 209 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 MSRB1Q9NZV6 116 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 UFC1Q9Y3C8 167 aa10.08□□□□□ -0.8
VAMP1-201ENST00000361716 IGKV1D-37A0A075B6S9 117 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 SCGB1C2P0DMR2 95 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 SRSF9Q13242 221 aaKnown RBP eCLIP10.07□□□□□ -0.8
VAMP1-201ENST00000361716 CT83Q5H943 113 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 LYPD2Q6UXB3 125 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 SCGB1D4Q6XE38 83 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 TMEM75Q8N9X5 138 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 OR4C13Q8NGP0 309 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 Q8TAT8 98 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 OSR1Q8TAX0 266 aaPredicted RBP10.07□□□□□ -0.8
VAMP1-201ENST00000361716 CGB1A6NKQ9 187 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 NPIPB5A8MRT5 1133 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 NDUFA4L2Q9NRX3 87 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 ZNF492Q9P255 531 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 H7C2G1 150 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 J3KRW8 73 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms