RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 ESM1Q9NQ30 184 aa16.3■□□□□ 0.2
CDC42BPB-201ENST00000361246 RLFQ13129 1914 aa16.3■□□□□ 0.2
CDC42BPB-201ENST00000361246 ANAPC1Q9H1A4 1944 aa16.3■□□□□ 0.2
CDC42BPB-201ENST00000361246 NEGR1Q7Z3B1 354 aa16.3■□□□□ 0.2
CDC42BPB-201ENST00000361246 TMEM158Q8WZ71 300 aa16.3■□□□□ 0.2
CDC42BPB-201ENST00000361246 IGHV4-30-2A0A087WSY4 118 aa16.3■□□□□ 0.2
CDC42BPB-201ENST00000361246 RNF5Q99942 180 aa16.3■□□□□ 0.2
CDC42BPB-201ENST00000361246 NXPH4O95158 308 aa16.29■□□□□ 0.2
CDC42BPB-201ENST00000361246 NUP35Q8NFH5 326 aa16.29■□□□□ 0.2
CDC42BPB-201ENST00000361246 RASL10AQ92737 203 aa16.29■□□□□ 0.2
CDC42BPB-201ENST00000361246 APRG1Q8IVJ8 170 aa16.29■□□□□ 0.2
CDC42BPB-201ENST00000361246 ZNRF2Q8NHG8 242 aa16.29■□□□□ 0.2
CDC42BPB-201ENST00000361246 MS4A6AQ9H2W1 248 aa16.29■□□□□ 0.2
CDC42BPB-201ENST00000361246 FAM215AQ9Y5M1 114 aa16.29■□□□□ 0.2
CDC42BPB-201ENST00000361246 VCYO14598 125 aa16.28■□□□□ 0.2
CDC42BPB-201ENST00000361246 Q6ZQT7 251 aa16.28■□□□□ 0.2
CDC42BPB-201ENST00000361246 DKK4Q9UBT3 224 aa16.28■□□□□ 0.2
CDC42BPB-201ENST00000361246 THAP8Q8NA92 274 aa16.28■□□□□ 0.2
CDC42BPB-201ENST00000361246 CCL24O00175 119 aa16.28■□□□□ 0.2
CDC42BPB-201ENST00000361246 DOCK11Q5JSL3 2073 aa16.27■□□□□ 0.2
CDC42BPB-201ENST00000361246 TANC1Q9C0D5 1861 aa16.27■□□□□ 0.2
CDC42BPB-201ENST00000361246 IGHV4-38-2P0DP08 117 aa16.27■□□□□ 0.2
CDC42BPB-201ENST00000361246 HOXB4P17483 251 aaPredicted RBP16.27■□□□□ 0.2
CDC42BPB-201ENST00000361246 MMP23AO75900 390 aa16.27■□□□□ 0.2
CDC42BPB-201ENST00000361246 PRIMA1Q86XR5 153 aa16.27■□□□□ 0.2
CDC42BPB-201ENST00000361246 C15orf62A8K5M9 175 aa16.27■□□□□ 0.19
CDC42BPB-201ENST00000361246 SLURP1P55000 103 aa16.27■□□□□ 0.19
CDC42BPB-201ENST00000361246 IGKV2D-24A0A075B6R9 120 aa16.27■□□□□ 0.19
CDC42BPB-201ENST00000361246 NOP10Q9NPE3 64 aaKnown RBP16.27■□□□□ 0.19
CDC42BPB-201ENST00000361246 hDV102S1A0JD36 115 aa16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 NOTCH4Q99466 2003 aa16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 WDR86Q86TI4 376 aa16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 NKAPP1Q8N9T2 125 aa16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 ZNF48Q96MX3 618 aaPredicted RBP16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 RPL32P62910 135 aaKnown RBP16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 SPRNQ5BIV9 151 aa16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 PIP4P1Q86T03 277 aa16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 PKDREJQ9NTG1 2253 aa16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 LIME1Q9H400 295 aa16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 NACAE9PAV3 2078 aa16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 IGFL3Q6UXB1 125 aa16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 ZNF562Q6V9R5 426 aa16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 ROS1P08922 2347 aa16.26■□□□□ 0.19
CDC42BPB-201ENST00000361246 ANGP03950 147 aaKnown RBP16.25■□□□□ 0.19
CDC42BPB-201ENST00000361246 C17orf58Q2M2W7 97 aa16.25■□□□□ 0.19
CDC42BPB-201ENST00000361246 VWC2Q2TAL6 325 aa16.25■□□□□ 0.19
CDC42BPB-201ENST00000361246 PPBPP02775 128 aa16.25■□□□□ 0.19
CDC42BPB-201ENST00000361246 ERG28Q9UKR5 140 aa16.25■□□□□ 0.19
CDC42BPB-201ENST00000361246 IGLV3-9A0A075B6K5 115 aa16.25■□□□□ 0.19
CDC42BPB-201ENST00000361246 TRBV25-1A0A075B6N4 114 aa16.25■□□□□ 0.19
CDC42BPB-201ENST00000361246 TMEM213A2RRL7 107 aa16.25■□□□□ 0.19
CDC42BPB-201ENST00000361246 SUMO4Q6EEV6 95 aa16.25■□□□□ 0.19
CDC42BPB-201ENST00000361246 TRAV8-4A0A0B4J246 113 aa16.25■□□□□ 0.19
CDC42BPB-201ENST00000361246 ANAPC10Q9UM13 185 aa16.25■□□□□ 0.19
CDC42BPB-201ENST00000361246 ITGB1BP1O14713 200 aa16.24■□□□□ 0.19
CDC42BPB-201ENST00000361246 STAG3L3P0CL85 134 aa16.24■□□□□ 0.19
CDC42BPB-201ENST00000361246 TSSC4Q9Y5U2 329 aaPredicted RBP16.24■□□□□ 0.19
CDC42BPB-201ENST00000361246 NCKAP5O14513 1909 aa16.24■□□□□ 0.19
CDC42BPB-201ENST00000361246 SPRY2O43597 315 aa16.24■□□□□ 0.19
CDC42BPB-201ENST00000361246 SPOCK3Q9BQ16 436 aa16.24■□□□□ 0.19
CDC42BPB-201ENST00000361246 TMEM242Q9NWH2 141 aa16.24■□□□□ 0.19
CDC42BPB-201ENST00000361246 PCNX1Q96RV3 2341 aa16.24■□□□□ 0.19
CDC42BPB-201ENST00000361246 HEATR5AQ86XA9 2040 aa16.23■□□□□ 0.19
CDC42BPB-201ENST00000361246 LOXP28300 417 aaPredicted RBP16.23■□□□□ 0.19
CDC42BPB-201ENST00000361246 GNB1LQ9BYB4 327 aa16.23■□□□□ 0.19
CDC42BPB-201ENST00000361246 Q6ZRM9 215 aa16.23■□□□□ 0.19
CDC42BPB-201ENST00000361246 ATP6V0BQ99437 205 aa16.23■□□□□ 0.19
CDC42BPB-201ENST00000361246 LEPROTO15243 131 aa16.23■□□□□ 0.19
CDC42BPB-201ENST00000361246 HIST2H2BCQ6DN03 193 aa16.23■□□□□ 0.19
CDC42BPB-201ENST00000361246 TMEM170AQ8WVE7 144 aa16.23■□□□□ 0.19
CDC42BPB-201ENST00000361246 MEGF9Q9H1U4 602 aa16.22■□□□□ 0.19
CDC42BPB-201ENST00000361246 J3QLI3 93 aa16.22■□□□□ 0.19
CDC42BPB-201ENST00000361246 F6UB75 175 aa16.22■□□□□ 0.19
CDC42BPB-201ENST00000361246 TMEM126AQ9H061 195 aa16.22■□□□□ 0.19
CDC42BPB-201ENST00000361246 TRAV8-3A0A0A6YYJ7 113 aa16.22■□□□□ 0.19
CDC42BPB-201ENST00000361246 IGHV4-61A0A0C4DH41 118 aa16.22■□□□□ 0.19
CDC42BPB-201ENST00000361246 PMVKQ15126 192 aa16.22■□□□□ 0.19
CDC42BPB-201ENST00000361246 TIMM21Q9BVV7 248 aa16.22■□□□□ 0.19
CDC42BPB-201ENST00000361246 CXCL1P09341 107 aa16.21■□□□□ 0.19
CDC42BPB-201ENST00000361246 TRAV9-2A0A087WT02 112 aa16.21■□□□□ 0.19
CDC42BPB-201ENST00000361246 TRAV25A0A0B4J276 109 aa16.21■□□□□ 0.19
CDC42BPB-201ENST00000361246 NMSQ5H8A3 153 aa16.21■□□□□ 0.19
CDC42BPB-201ENST00000361246 SHANK2-AS3Q9BTD1 123 aa16.21■□□□□ 0.19
CDC42BPB-201ENST00000361246 C22orf46C9J442 243 aa16.21■□□□□ 0.19
CDC42BPB-201ENST00000361246 DEFB4AO15263 64 aa16.21■□□□□ 0.19
CDC42BPB-201ENST00000361246 FBLN5Q9UBX5 448 aa16.21■□□□□ 0.18
CDC42BPB-201ENST00000361246 SHISA9B4DS77 424 aa16.2■□□□□ 0.18
CDC42BPB-201ENST00000361246 RASL11AQ6T310 242 aa16.2■□□□□ 0.18
CDC42BPB-201ENST00000361246 ZNF524Q96C55 264 aa16.2■□□□□ 0.18
CDC42BPB-201ENST00000361246 A0A087WWC5 75 aa16.2■□□□□ 0.18
CDC42BPB-201ENST00000361246 RIF1Q5UIP0 2472 aaKnown RBP16.2■□□□□ 0.18
CDC42BPB-201ENST00000361246 CHD3Q12873 2000 aaKnown RBP16.2■□□□□ 0.18
CDC42BPB-201ENST00000361246 GHRHP01286 108 aa16.19■□□□□ 0.18
CDC42BPB-201ENST00000361246 CARHSP1Q9Y2V2 147 aaKnown RBP16.19■□□□□ 0.18
CDC42BPB-201ENST00000361246 ZFP36P26651 326 aaKnown RBP16.19■□□□□ 0.18
CDC42BPB-201ENST00000361246 CHCHD1Q96BP2 118 aaKnown RBP16.19■□□□□ 0.18
CDC42BPB-201ENST00000361246 TRAV9-1A0A075B6T8 112 aa16.19■□□□□ 0.18
CDC42BPB-201ENST00000361246 A0A1B0GUS0 222 aa16.19■□□□□ 0.18
CDC42BPB-201ENST00000361246 DEFB105AQ8NG35 78 aa16.19■□□□□ 0.18
CDC42BPB-201ENST00000361246 TMEM238C9JI98 176 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms