RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 TRAV1-1A0A0B4J248 108 aa9.05□□□□□ -0.96
COL11A1-202ENST00000358392 PRSS29PA6NIE9 313 aa9.05□□□□□ -0.96
COL11A1-202ENST00000358392 CEND1Q8N111 149 aa9.05□□□□□ -0.96
COL11A1-202ENST00000358392 PPDPFLQ8WWR9 84 aa9.05□□□□□ -0.96
COL11A1-202ENST00000358392 DOCK3Q8IZD9 2030 aa9.05□□□□□ -0.96
COL11A1-202ENST00000358392 TMEM14EPQ6UXP3 125 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 SPACA3Q8IXA5 215 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 AKAP6Q13023 2319 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 IGHV1-24A0A0C4DH33 117 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 C2orf66Q6UXQ4 117 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 Q71RC1 249 aaPredicted RBP9.04□□□□□ -0.96
COL11A1-202ENST00000358392 MBD3L4A6NDZ8 208 aaPredicted RBP9.04□□□□□ -0.96
COL11A1-202ENST00000358392 MBD3L3A6NE82 208 aaPredicted RBP9.04□□□□□ -0.96
COL11A1-202ENST00000358392 MBD3L5A6NJ08 208 aaPredicted RBP9.04□□□□□ -0.96
COL11A1-202ENST00000358392 SAA4P35542 130 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 MBD3L2Q8NHZ7 208 aaPredicted RBP9.04□□□□□ -0.96
COL11A1-202ENST00000358392 C1QTNF4Q9BXJ3 329 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 SRRM5B3KS81 715 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 C20orf204Q6ZNR8 217 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 GGNQ86UU5 652 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 C1orf43Q9BWL3 253 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 NHSL1Q5SYE7 1610 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 IGKV1-39P01597 117 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 IGKV1D-39P04432 117 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 HLA-DRB4P13762 266 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 CSRP3P50461 194 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 GAS1P54826 345 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 HLA-DRB4X5D2U9 266 aa9.04□□□□□ -0.96
COL11A1-202ENST00000358392 SHISA9B4DS77 424 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 EFNA4P52798 201 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 HS3ST6Q96QI5 342 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 ARFGEF3Q5TH69 2177 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 A0A0G2JNJ9 132 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 RNASE2P10153 161 aaKnown RBP9.03□□□□□ -0.96
COL11A1-202ENST00000358392 MRPL51Q4U2R6 128 aaKnown RBP9.03□□□□□ -0.96
COL11A1-202ENST00000358392 LHFPL1Q86WI0 220 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 Q9UFV3 132 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 ANK1P16157 1881 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 C3orf56Q8N813 242 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 LTBP4Q8N2S1 1624 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 K7EP13 123 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 ANKRD29Q8N6D5 301 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 CFHR1Q03591 330 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 MINOS1Q5TGZ0 78 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 TMEM105Q8N8V8 129 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 USMG5Q96IX5 58 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 DAZ1Q9NQZ3 744 aaKnown RBP9.03□□□□□ -0.96
COL11A1-202ENST00000358392 MINOS1-NBL1R4GNA1 71 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 EGR2P11161 476 aaPredicted RBP9.03□□□□□ -0.96
COL11A1-202ENST00000358392 TMEM75Q8N9X5 138 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 C18orf32Q8TCD1 76 aa9.03□□□□□ -0.96
COL11A1-202ENST00000358392 TMEM141Q96I45 108 aa9.02□□□□□ -0.96
COL11A1-202ENST00000358392 E9PLN8 166 aa9.02□□□□□ -0.97
COL11A1-202ENST00000358392 AMTNQ6UX39 209 aa9.02□□□□□ -0.97
COL11A1-202ENST00000358392 FBLN5Q9UBX5 448 aa9.02□□□□□ -0.97
COL11A1-202ENST00000358392 GAGE12HA6NDE8 117 aa9.02□□□□□ -0.97
COL11A1-202ENST00000358392 F8W1H4 67 aa9.02□□□□□ -0.97
COL11A1-202ENST00000358392 CHKB-CPT1BH3BT56 60 aa9.02□□□□□ -0.97
COL11A1-202ENST00000358392 RNF166Q96A37 237 aaPredicted RBP9.02□□□□□ -0.97
COL11A1-202ENST00000358392 COL18A1P39060 1754 aa9.02□□□□□ -0.97
COL11A1-202ENST00000358392 UTF1Q5T230 341 aa9.02□□□□□ -0.97
COL11A1-202ENST00000358392 Q6P435 159 aa9.02□□□□□ -0.97
COL11A1-202ENST00000358392 IGF2BP2-AS1Q96M15 143 aa9.02□□□□□ -0.97
COL11A1-202ENST00000358392 IGKV1D-17A0A075B6S4 117 aa9.02□□□□□ -0.97
COL11A1-202ENST00000358392 BPESC1Q9GZL8 116 aa9.02□□□□□ -0.97
COL11A1-202ENST00000358392 A0A1W2PPM0 123 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 K7EP34 96 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 TEX36Q5VZQ5 186 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 Q8N8P6 123 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 C22orf46C9J442 243 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 ATP6V0E1O15342 81 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 MST1P26927 711 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 SHANK2-AS3Q9BTD1 123 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 TMEM243Q9BU79 118 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 SMIM2Q9BVW6 85 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 GFRA4Q9GZZ7 299 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 NDUFA12Q9UI09 145 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 A0A1W2PPI3 338 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 B4DSR2 109 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 ANGP03950 147 aaKnown RBP9.01□□□□□ -0.97
COL11A1-202ENST00000358392 LYPD1Q8N2G4 141 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 KLHDC3Q9BQ90 382 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 IL18BPO95998 194 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 TMEM258P61165 79 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 Q6ZRM9 215 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 Q6ZWC4 215 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 FAM110DQ8TAY7 271 aaPredicted RBP9.01□□□□□ -0.97
COL11A1-202ENST00000358392 LY96Q9Y6Y9 160 aa9.01□□□□□ -0.97
COL11A1-202ENST00000358392 PRSS46E5RG02 174 aa9□□□□□ -0.97
COL11A1-202ENST00000358392 IGLC2P0DOY2 106 aa9□□□□□ -0.97
COL11A1-202ENST00000358392 IGLC3P0DOY3 106 aa9□□□□□ -0.97
COL11A1-202ENST00000358392 HEATR5AQ86XA9 2040 aa9□□□□□ -0.97
COL11A1-202ENST00000358392 WFDC9Q8NEX5 89 aa9□□□□□ -0.97
COL11A1-202ENST00000358392 BVES-AS1Q5T3Y7 98 aa9□□□□□ -0.97
COL11A1-202ENST00000358392 KLF2Q9Y5W3 355 aaPredicted RBP9□□□□□ -0.97
COL11A1-202ENST00000358392 UBR3Q6ZT12 1888 aa9□□□□□ -0.97
COL11A1-202ENST00000358392 COL4A1P02462 1669 aa9□□□□□ -0.97
COL11A1-202ENST00000358392 C9JQL5 133 aa9□□□□□ -0.97
COL11A1-202ENST00000358392 DSCR9P59020 149 aa9□□□□□ -0.97
COL11A1-202ENST00000358392 PRO1854Q9UHT4 67 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms