RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 OTORQ9NRC9 128 aa11.3□□□□□ -0.6
TPM1-206ENST00000358278 F6UB75 175 aa11.29□□□□□ -0.6
TPM1-206ENST00000358278 DEFA6Q01524 100 aa11.29□□□□□ -0.6
TPM1-206ENST00000358278 FOXI2Q6ZQN5 318 aa11.29□□□□□ -0.6
TPM1-206ENST00000358278 MRPL53Q96EL3 112 aaKnown RBP11.29□□□□□ -0.6
TPM1-206ENST00000358278 SAV1Q9H4B6 383 aaPredicted RBP11.29□□□□□ -0.6
TPM1-206ENST00000358278 A0A1W2PRE2 83 aa11.29□□□□□ -0.6
TPM1-206ENST00000358278 PGPA6NDG6 321 aa11.29□□□□□ -0.6
TPM1-206ENST00000358278 PRB4P10163 310 aaPredicted RBP11.29□□□□□ -0.6
TPM1-206ENST00000358278 CSN1S1P47710 185 aa11.29□□□□□ -0.6
TPM1-206ENST00000358278 PPT1P50897 306 aa11.29□□□□□ -0.6
TPM1-206ENST00000358278 CMTM2Q8TAZ6 248 aa11.29□□□□□ -0.6
TPM1-206ENST00000358278 CITED4Q96RK1 184 aa11.29□□□□□ -0.6
TPM1-206ENST00000358278 DEFB121Q5J5C9 76 aa11.28□□□□□ -0.6
TPM1-206ENST00000358278 GDF5OSQ5U4N7 250 aa11.28□□□□□ -0.6
TPM1-206ENST00000358278 CST9LP1Q5W188 147 aa11.28□□□□□ -0.6
TPM1-206ENST00000358278 MRAPQ8TCY5 172 aa11.28□□□□□ -0.6
TPM1-206ENST00000358278 GNG13Q9P2W3 67 aa11.28□□□□□ -0.6
TPM1-206ENST00000358278 RPH3ALQ9UNE2 315 aa11.28□□□□□ -0.6
TPM1-206ENST00000358278 YTHDF2Q9Y5A9 579 aaKnown RBP11.28□□□□□ -0.6
TPM1-206ENST00000358278 A0A0J9YX75 114 aa11.27□□□□□ -0.61
TPM1-206ENST00000358278 FAM74A7A6NL05 159 aa11.27□□□□□ -0.61
TPM1-206ENST00000358278 GGTLC3B5MD39 225 aa11.27□□□□□ -0.61
TPM1-206ENST00000358278 SLC25A5P05141 298 aaKnown RBP11.27□□□□□ -0.61
TPM1-206ENST00000358278 HLA-DRB4P13762 266 aa11.27□□□□□ -0.61
TPM1-206ENST00000358278 CCL20P78556 96 aa11.27□□□□□ -0.61
TPM1-206ENST00000358278 HIST1H1AQ02539 215 aaPredicted RBP11.27□□□□□ -0.61
TPM1-206ENST00000358278 OR4B1Q8NGF8 309 aa11.27□□□□□ -0.61
TPM1-206ENST00000358278 OR8A1Q8NGG7 326 aa11.27□□□□□ -0.61
TPM1-206ENST00000358278 OR10J6PQ8NGY7 276 aa11.27□□□□□ -0.61
TPM1-206ENST00000358278 NKX6-2Q9C056 277 aaPredicted RBP11.27□□□□□ -0.61
TPM1-206ENST00000358278 MANBALQ9NQG1 85 aa11.27□□□□□ -0.61
TPM1-206ENST00000358278 ARL2-SNX15V9GYD0 113 aa11.27□□□□□ -0.61
TPM1-206ENST00000358278 HLA-DRB4X5D2U9 266 aa11.27□□□□□ -0.61
TPM1-206ENST00000358278 FBN3Q75N90 2809 aa11.27□□□□□ -0.61
TPM1-206ENST00000358278 PAGE4O60829 102 aa11.26□□□□□ -0.61
TPM1-206ENST00000358278 ZNF705DP0CH99 300 aaPredicted RBP11.26□□□□□ -0.61
TPM1-206ENST00000358278 ZNF705BP0CI00 300 aaPredicted RBP11.26□□□□□ -0.61
TPM1-206ENST00000358278 RPL35AP18077 110 aaKnown RBP11.26□□□□□ -0.61
TPM1-206ENST00000358278 SUMO1P63165 101 aaKnown RBP11.26□□□□□ -0.61
TPM1-206ENST00000358278 C5orf17Q8NAS9 161 aa11.26□□□□□ -0.61
TPM1-206ENST00000358278 RXFP4Q8TDU9 374 aa11.26□□□□□ -0.61
TPM1-206ENST00000358278 PCNPQ8WW12 178 aaKnown RBP11.26□□□□□ -0.61
TPM1-206ENST00000358278 PRAC2D3DTV9 90 aa11.26□□□□□ -0.61
TPM1-206ENST00000358278 H3BMM0 161 aa11.26□□□□□ -0.61
TPM1-206ENST00000358278 IFNA1P01562 189 aa11.26□□□□□ -0.61
TPM1-206ENST00000358278 IGKV3-20P01619 116 aa11.26□□□□□ -0.61
TPM1-206ENST00000358278 LOC102724200A0A096LPH7 203 aaPredicted RBP11.25□□□□□ -0.61
TPM1-206ENST00000358278 A8MZ25 164 aa11.25□□□□□ -0.61
TPM1-206ENST00000358278 DUSP14O95147 198 aaKnown RBP11.25□□□□□ -0.61
TPM1-206ENST00000358278 FRMD6-AS1P0C7T7 363 aa11.25□□□□□ -0.61
TPM1-206ENST00000358278 CNN1P51911 297 aaKnown RBP11.25□□□□□ -0.61
TPM1-206ENST00000358278 ZNF767PQ75MW2 155 aa11.25□□□□□ -0.61
TPM1-206ENST00000358278 TRPT1Q86TN4 253 aaKnown RBP11.25□□□□□ -0.61
TPM1-206ENST00000358278 NBEAL2Q6ZNJ1 2754 aa11.24□□□□□ -0.61
TPM1-206ENST00000358278 IGKV2-40A0A087WW87 121 aaPredicted RBP11.24□□□□□ -0.61
TPM1-206ENST00000358278 RBMY1BA6NDE4 496 aaKnown RBP11.24□□□□□ -0.61
TPM1-206ENST00000358278 RBMY1EA6NEQ0 496 aaKnown RBP11.24□□□□□ -0.61
TPM1-206ENST00000358278 IGKV2D-40P01614 121 aaPredicted RBP11.24□□□□□ -0.61
TPM1-206ENST00000358278 RBMY1DP0C7P1 496 aaKnown RBP11.24□□□□□ -0.61
TPM1-206ENST00000358278 RAB14P61106 215 aa11.24□□□□□ -0.61
TPM1-206ENST00000358278 GNG5P63218 68 aa11.24□□□□□ -0.61
TPM1-206ENST00000358278 DIRC3C9JPN6 131 aa11.23□□□□□ -0.61
TPM1-206ENST00000358278 ATP5G3P48201 142 aa11.23□□□□□ -0.61
TPM1-206ENST00000358278 IFITM2Q01629 132 aa11.23□□□□□ -0.61
TPM1-206ENST00000358278 LYPD6BQ8NI32 183 aa11.23□□□□□ -0.61
TPM1-206ENST00000358278 PPP1R14DQ9NXH3 145 aa11.23□□□□□ -0.61
TPM1-206ENST00000358278 C11orf94C9JXX5 98 aa11.23□□□□□ -0.61
TPM1-206ENST00000358278 K7EQM0 130 aa11.23□□□□□ -0.61
TPM1-206ENST00000358278 NMBP08949 121 aa11.23□□□□□ -0.61
TPM1-206ENST00000358278 HAGHQ16775 308 aa11.23□□□□□ -0.61
TPM1-206ENST00000358278 GOLT1AQ6ZVE7 132 aa11.23□□□□□ -0.61
TPM1-206ENST00000358278 ARL6IP6Q8N6S5 226 aa11.23□□□□□ -0.61
TPM1-206ENST00000358278 TCRAP04437 139 aa11.22□□□□□ -0.61
TPM1-206ENST00000358278 BCL2P10415 239 aa11.22□□□□□ -0.61
TPM1-206ENST00000358278 APOC4P55056 127 aa11.22□□□□□ -0.61
TPM1-206ENST00000358278 NUTF2P61970 127 aaKnown RBP11.22□□□□□ -0.61
TPM1-206ENST00000358278 TMEM78Q5T7P6 136 aa11.22□□□□□ -0.61
TPM1-206ENST00000358278 ATG101Q9BSB4 218 aa11.22□□□□□ -0.61
TPM1-206ENST00000358278 EPDR1Q9UM22 224 aa11.22□□□□□ -0.61
TPM1-206ENST00000358278 PRKDCP78527 4128 aaKnown RBP11.22□□□□□ -0.61
TPM1-206ENST00000358278 SERTM2A0A1B0GWG4 89 aa11.21□□□□□ -0.61
TPM1-206ENST00000358278 RBAKDNA6NC62 111 aa11.21□□□□□ -0.61
TPM1-206ENST00000358278 NPIPB6E9PJ23 425 aa11.21□□□□□ -0.61
TPM1-206ENST00000358278 TAGLN2P37802 199 aaKnown RBP11.21□□□□□ -0.61
TPM1-206ENST00000358278 ERCC8Q13216 396 aa11.21□□□□□ -0.61
TPM1-206ENST00000358278 PMS2P11Q13670 270 aa11.21□□□□□ -0.61
TPM1-206ENST00000358278 MORN3Q6PF18 240 aaPredicted RBP11.21□□□□□ -0.61
TPM1-206ENST00000358278 CYB561D1Q8N8Q1 229 aa11.21□□□□□ -0.61
TPM1-206ENST00000358278 VGLL1Q99990 258 aa11.21□□□□□ -0.61
TPM1-206ENST00000358278 TCEAL7Q9BRU2 100 aa11.21□□□□□ -0.61
TPM1-206ENST00000358278 F6UZH7 168 aa11.21□□□□□ -0.62
TPM1-206ENST00000358278 PEX7O00628 323 aa11.21□□□□□ -0.62
TPM1-206ENST00000358278 MEF2BQ02080 365 aaPredicted RBP11.21□□□□□ -0.62
TPM1-206ENST00000358278 C9orf47Q6ZRZ4 202 aa11.21□□□□□ -0.62
TPM1-206ENST00000358278 CCDC28AQ8IWP9 274 aa11.21□□□□□ -0.62
TPM1-206ENST00000358278 HIST1H2BAQ96A08 127 aa11.21□□□□□ -0.62
TPM1-206ENST00000358278 CLUHP3Q96NS8 147 aa11.21□□□□□ -0.62
TPM1-206ENST00000358278 TXNDC17Q9BRA2 123 aa11.21□□□□□ -0.62
TPM1-206ENST00000358278 CSTL1Q9H114 145 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms