RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 PRKDCP78527 4128 aaKnown RBP11.04□□□□□ -0.64
CCNE1-202ENST00000357943 TMEM167BQ9NRX6 74 aa11.03□□□□□ -0.64
CCNE1-202ENST00000357943 MEGF8Q7Z7M0 2845 aa11.03□□□□□ -0.64
CCNE1-202ENST00000357943 K7EIL1 84 aa11.02□□□□□ -0.64
CCNE1-202ENST00000357943 HBE1P02100 147 aa11.02□□□□□ -0.64
CCNE1-202ENST00000357943 CCL20P78556 96 aa11.02□□□□□ -0.64
CCNE1-202ENST00000357943 PSG9Q00887 426 aa11.02□□□□□ -0.64
CCNE1-202ENST00000357943 PRELID1Q9Y255 219 aa11.02□□□□□ -0.64
CCNE1-202ENST00000357943 ZNF705FA8MVS1 300 aaPredicted RBP11.02□□□□□ -0.65
CCNE1-202ENST00000357943 M0R3E3 92 aa11.02□□□□□ -0.65
CCNE1-202ENST00000357943 CMC4P56277 68 aaPredicted RBP11.02□□□□□ -0.65
CCNE1-202ENST00000357943 ICAM4Q14773 271 aa11.02□□□□□ -0.65
CCNE1-202ENST00000357943 PSG3Q16557 428 aa11.02□□□□□ -0.65
CCNE1-202ENST00000357943 GDF5OSQ5U4N7 250 aa11.02□□□□□ -0.65
CCNE1-202ENST00000357943 UQCC3Q6UW78 93 aa11.02□□□□□ -0.65
CCNE1-202ENST00000357943 Q9H3A6 140 aa11.02□□□□□ -0.65
CCNE1-202ENST00000357943 F6UB75 175 aa11.01□□□□□ -0.65
CCNE1-202ENST00000357943 IGHV4-30-4P0DP06 118 aa11.01□□□□□ -0.65
CCNE1-202ENST00000357943 SRSF3P84103 164 aaKnown RBP11.01□□□□□ -0.65
CCNE1-202ENST00000357943 ZNF738Q8NE65 137 aa11.01□□□□□ -0.65
CCNE1-202ENST00000357943 AAMDCQ9H7C9 122 aa11.01□□□□□ -0.65
CCNE1-202ENST00000357943 DNAH9Q9NYC9 4486 aa11□□□□□ -0.65
CCNE1-202ENST00000357943 KNCNA6PVL3 124 aa11□□□□□ -0.65
CCNE1-202ENST00000357943 UBE2G2P60604 165 aa11□□□□□ -0.65
CCNE1-202ENST00000357943 DEFA6Q01524 100 aa11□□□□□ -0.65
CCNE1-202ENST00000357943 LYPD1Q8N2G4 141 aa11□□□□□ -0.65
CCNE1-202ENST00000357943 SRD5A3Q9H8P0 318 aa11□□□□□ -0.65
CCNE1-202ENST00000357943 PRAC2D3DTV9 90 aa10.99□□□□□ -0.65
CCNE1-202ENST00000357943 ACTL10Q5JWF8 245 aa10.99□□□□□ -0.65
CCNE1-202ENST00000357943 RPUSD4Q96CM3 377 aaKnown RBP10.99□□□□□ -0.65
CCNE1-202ENST00000357943 CLEC5AQ9NY25 188 aa10.99□□□□□ -0.65
CCNE1-202ENST00000357943 YTHDF2Q9Y5A9 579 aaKnown RBP10.99□□□□□ -0.65
CCNE1-202ENST00000357943 PGPA6NDG6 321 aa10.98□□□□□ -0.65
CCNE1-202ENST00000357943 GGTLC3B5MD39 225 aa10.98□□□□□ -0.65
CCNE1-202ENST00000357943 ZNF705DP0CH99 300 aaPredicted RBP10.98□□□□□ -0.65
CCNE1-202ENST00000357943 ZNF705BP0CI00 300 aaPredicted RBP10.98□□□□□ -0.65
CCNE1-202ENST00000357943 SAV1Q9H4B6 383 aaPredicted RBP10.98□□□□□ -0.65
CCNE1-202ENST00000357943 TUBA4BQ9H853 241 aa10.98□□□□□ -0.65
CCNE1-202ENST00000357943 OTORQ9NRC9 128 aa10.98□□□□□ -0.65
CCNE1-202ENST00000357943 A0A1W2PRE2 83 aa10.98□□□□□ -0.65
CCNE1-202ENST00000357943 FAM74A7A6NL05 159 aa10.98□□□□□ -0.65
CCNE1-202ENST00000357943 SUMO1P63165 101 aaKnown RBP10.98□□□□□ -0.65
CCNE1-202ENST00000357943 FOXI2Q6ZQN5 318 aa10.98□□□□□ -0.65
CCNE1-202ENST00000357943 MRPL53Q96EL3 112 aaKnown RBP10.98□□□□□ -0.65
CCNE1-202ENST00000357943 A0A0J9YX75 114 aa10.97□□□□□ -0.65
CCNE1-202ENST00000357943 RBMY1BA6NDE4 496 aaKnown RBP10.97□□□□□ -0.65
CCNE1-202ENST00000357943 RBMY1EA6NEQ0 496 aaKnown RBP10.97□□□□□ -0.65
CCNE1-202ENST00000357943 RBFOX3A6NFN3 312 aa10.97□□□□□ -0.65
CCNE1-202ENST00000357943 RBMY1DP0C7P1 496 aaKnown RBP10.97□□□□□ -0.65
CCNE1-202ENST00000357943 HLA-DRB4P13762 266 aa10.97□□□□□ -0.65
CCNE1-202ENST00000357943 PMS2P11Q13670 270 aa10.97□□□□□ -0.65
CCNE1-202ENST00000357943 DEFB121Q5J5C9 76 aa10.97□□□□□ -0.65
CCNE1-202ENST00000357943 STHQ8IWL8 128 aa10.97□□□□□ -0.65
CCNE1-202ENST00000357943 TREM1Q9NP99 234 aa10.97□□□□□ -0.65
CCNE1-202ENST00000357943 HLA-DRB4X5D2U9 266 aa10.97□□□□□ -0.65
CCNE1-202ENST00000357943 A8MZ25 164 aa10.96□□□□□ -0.65
CCNE1-202ENST00000357943 H3BMM0 161 aa10.96□□□□□ -0.65
CCNE1-202ENST00000357943 PAGE4O60829 102 aa10.96□□□□□ -0.65
CCNE1-202ENST00000357943 IGKV3-20P01619 116 aa10.96□□□□□ -0.65
CCNE1-202ENST00000357943 PEA15Q15121 130 aa10.96□□□□□ -0.65
CCNE1-202ENST00000357943 EBLN2Q6P2I7 272 aa10.96□□□□□ -0.65
CCNE1-202ENST00000357943 OR8A1Q8NGG7 326 aa10.96□□□□□ -0.65
CCNE1-202ENST00000357943 MRAPQ8TCY5 172 aa10.96□□□□□ -0.65
CCNE1-202ENST00000357943 EIF5A2Q9GZV4 153 aaKnown RBP10.96□□□□□ -0.65
CCNE1-202ENST00000357943 GNG13Q9P2W3 67 aa10.96□□□□□ -0.65
CCNE1-202ENST00000357943 HUWE1Q7Z6Z7 4374 aaKnown RBP10.96□□□□□ -0.65
CCNE1-202ENST00000357943 AGRNO00468 2067 aa10.96□□□□□ -0.66
CCNE1-202ENST00000357943 TMEM218A2RU14 115 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 C9JQL5 133 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 RPL35AP18077 110 aaKnown RBP10.95□□□□□ -0.66
CCNE1-202ENST00000357943 CNN1P51911 297 aaKnown RBP10.95□□□□□ -0.66
CCNE1-202ENST00000357943 GNG5P63218 68 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 CST9LP1Q5W188 147 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 TRPT1Q86TN4 253 aaKnown RBP10.95□□□□□ -0.66
CCNE1-202ENST00000357943 OR4B1Q8NGF8 309 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 CMTM2Q8TAZ6 248 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 RARRES2Q99969 163 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 RPH3ALQ9UNE2 315 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 IGKV2-40A0A087WW87 121 aaPredicted RBP10.95□□□□□ -0.66
CCNE1-202ENST00000357943 DIRC3C9JPN6 131 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 IGKV2D-40P01614 121 aaPredicted RBP10.95□□□□□ -0.66
CCNE1-202ENST00000357943 SLC25A5P05141 298 aaKnown RBP10.95□□□□□ -0.66
CCNE1-202ENST00000357943 FRMD6-AS1P0C7T7 363 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 CSN1S1P47710 185 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 ATP5G3P48201 142 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 HIST1H1AQ02539 215 aaPredicted RBP10.95□□□□□ -0.66
CCNE1-202ENST00000357943 HAGHQ16775 308 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 ZNF506Q5JVG8 444 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 LINC00322Q6ZN03 302 aaPredicted RBP10.95□□□□□ -0.66
CCNE1-202ENST00000357943 RXFP4Q8TDU9 374 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 SMDT1Q9H4I9 107 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 ARL2-SNX15V9GYD0 113 aa10.95□□□□□ -0.66
CCNE1-202ENST00000357943 LOC102724200A0A096LPH7 203 aaPredicted RBP10.94□□□□□ -0.66
CCNE1-202ENST00000357943 LOC102723971A0A1B0GUV8 181 aa10.94□□□□□ -0.66
CCNE1-202ENST00000357943 PPT1P50897 306 aa10.94□□□□□ -0.66
CCNE1-202ENST00000357943 C5orf17Q8NAS9 161 aa10.94□□□□□ -0.66
CCNE1-202ENST00000357943 OR10J6PQ8NGY7 276 aa10.94□□□□□ -0.66
CCNE1-202ENST00000357943 MANBALQ9NQG1 85 aa10.94□□□□□ -0.66
CCNE1-202ENST00000357943 IFNA1P01562 189 aa10.93□□□□□ -0.66
CCNE1-202ENST00000357943 BCL2P10415 239 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms