RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 OTORQ9NRC9 128 aa11.81□□□□□ -0.52
FDPS-201ENST00000356657 TRAV1-1A0A0B4J248 108 aa11.8□□□□□ -0.52
FDPS-201ENST00000356657 RBMY1BA6NDE4 496 aaKnown RBP11.8□□□□□ -0.52
FDPS-201ENST00000356657 RBMY1EA6NEQ0 496 aaKnown RBP11.8□□□□□ -0.52
FDPS-201ENST00000356657 A8MTW9 85 aa11.8□□□□□ -0.52
FDPS-201ENST00000356657 H3BTX0 84 aa11.8□□□□□ -0.52
FDPS-201ENST00000356657 HMGB3O15347 200 aaKnown RBP11.8□□□□□ -0.52
FDPS-201ENST00000356657 RBMY1DP0C7P1 496 aaKnown RBP11.8□□□□□ -0.52
FDPS-201ENST00000356657 NHLRC4P0CG21 123 aaPredicted RBP11.8□□□□□ -0.52
FDPS-201ENST00000356657 CSN1S1P47710 185 aa11.8□□□□□ -0.52
FDPS-201ENST00000356657 PPT1P50897 306 aa11.8□□□□□ -0.52
FDPS-201ENST00000356657 C1QTNF4Q9BXJ3 329 aa11.8□□□□□ -0.52
FDPS-201ENST00000356657 A0A1W2PRE2 83 aa11.79□□□□□ -0.52
FDPS-201ENST00000356657 HBE1P02100 147 aa11.79□□□□□ -0.52
FDPS-201ENST00000356657 SNRPCP09234 159 aaKnown RBP11.79□□□□□ -0.52
FDPS-201ENST00000356657 RANP62826 216 aaKnown RBP11.79□□□□□ -0.52
FDPS-201ENST00000356657 ICAM4Q14773 271 aa11.79□□□□□ -0.52
FDPS-201ENST00000356657 ZNF124Q15973 351 aa11.79□□□□□ -0.52
FDPS-201ENST00000356657 SSX7Q7RTT5 188 aa11.79□□□□□ -0.52
FDPS-201ENST00000356657 OR8A1Q8NGG7 326 aa11.79□□□□□ -0.52
FDPS-201ENST00000356657 OR10J6PQ8NGY7 276 aa11.79□□□□□ -0.52
FDPS-201ENST00000356657 SFT2D1Q8WV19 159 aa11.79□□□□□ -0.52
FDPS-201ENST00000356657 Q9H3A6 140 aa11.79□□□□□ -0.52
FDPS-201ENST00000356657 KNCNA6PVL3 124 aa11.78□□□□□ -0.52
FDPS-201ENST00000356657 FHITP49789 147 aa11.78□□□□□ -0.52
FDPS-201ENST00000356657 CMTM2Q8TAZ6 248 aa11.78□□□□□ -0.52
FDPS-201ENST00000356657 TCEAL7Q9BRU2 100 aa11.78□□□□□ -0.52
FDPS-201ENST00000356657 CSTL1Q9H114 145 aa11.78□□□□□ -0.52
FDPS-201ENST00000356657 PLA2G2EQ9NZK7 142 aa11.78□□□□□ -0.52
FDPS-201ENST00000356657 SERTM2A0A1B0GWG4 89 aa11.77□□□□□ -0.52
FDPS-201ENST00000356657 RBAKDNA6NC62 111 aa11.77□□□□□ -0.52
FDPS-201ENST00000356657 AMBPP02760 352 aa11.77□□□□□ -0.52
FDPS-201ENST00000356657 HAGHQ16775 308 aa11.77□□□□□ -0.52
FDPS-201ENST00000356657 IGFL4Q6B9Z1 124 aa11.77□□□□□ -0.52
FDPS-201ENST00000356657 Q6ZWC4 215 aa11.77□□□□□ -0.52
FDPS-201ENST00000356657 IQCF2Q8IXL9 164 aa11.77□□□□□ -0.52
FDPS-201ENST00000356657 EXOC3-AS1Q8N2X6 119 aa11.77□□□□□ -0.52
FDPS-201ENST00000356657 SLC25A5P05141 298 aaKnown RBP11.76□□□□□ -0.53
FDPS-201ENST00000356657 HLA-DMBP28068 263 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 CNN1P51911 297 aaKnown RBP11.76□□□□□ -0.53
FDPS-201ENST00000356657 C5orf17Q8NAS9 161 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 ODF3Q96PU9 254 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 TP53TG1Q9Y2A0 90 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 BOLA1Q9Y3E2 137 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 TGP01266 2768 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 M0R3E3 92 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 EIF3GO75821 320 aaKnown RBP eCLIP11.76□□□□□ -0.53
FDPS-201ENST00000356657 RPL35AP18077 110 aaKnown RBP11.76□□□□□ -0.53
FDPS-201ENST00000356657 BLOC1S1P78537 153 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 HIST1H1AQ02539 215 aaPredicted RBP11.76□□□□□ -0.53
FDPS-201ENST00000356657 GDF5OSQ5U4N7 250 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 ALKAL2Q6UX46 152 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 OR4B1Q8NGF8 309 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 SPATA25Q9BR10 227 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 TM2D3Q9BRN9 247 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 ZMAT4Q9H898 229 aa11.76□□□□□ -0.53
FDPS-201ENST00000356657 TRBV7-9A0A0J9YWB2 115 aa11.75□□□□□ -0.53
FDPS-201ENST00000356657 PGPA6NDG6 321 aa11.75□□□□□ -0.53
FDPS-201ENST00000356657 FBLL1A6NHQ2 334 aaKnown RBP11.75□□□□□ -0.53
FDPS-201ENST00000356657 ZNF705EA8MWA4 302 aaPredicted RBP11.75□□□□□ -0.53
FDPS-201ENST00000356657 NPIPB6E9PJ23 425 aa11.75□□□□□ -0.53
FDPS-201ENST00000356657 F6UB75 175 aa11.75□□□□□ -0.53
FDPS-201ENST00000356657 FGF8P55075 233 aaPredicted RBP11.75□□□□□ -0.53
FDPS-201ENST00000356657 PMS2P11Q13670 270 aa11.75□□□□□ -0.53
FDPS-201ENST00000356657 SBSPONQ8IVN8 264 aa11.75□□□□□ -0.53
FDPS-201ENST00000356657 LINC00477Q96M19 166 aa11.75□□□□□ -0.53
FDPS-201ENST00000356657 ZNF705FA8MVS1 300 aaPredicted RBP11.74□□□□□ -0.53
FDPS-201ENST00000356657 K7EQM0 130 aa11.74□□□□□ -0.53
FDPS-201ENST00000356657 CA1P00915 261 aaPredicted RBP11.74□□□□□ -0.53
FDPS-201ENST00000356657 IFNA7P01567 189 aa11.74□□□□□ -0.53
FDPS-201ENST00000356657 TSPOP30536 169 aa11.74□□□□□ -0.53
FDPS-201ENST00000356657 TAGLN2P37802 199 aaKnown RBP11.74□□□□□ -0.53
FDPS-201ENST00000356657 C9orf47Q6ZRZ4 202 aa11.74□□□□□ -0.53
FDPS-201ENST00000356657 TXNDC17Q9BRA2 123 aa11.74□□□□□ -0.53
FDPS-201ENST00000356657 MANBALQ9NQG1 85 aa11.74□□□□□ -0.53
FDPS-201ENST00000356657 PPP1R14DQ9NXH3 145 aa11.74□□□□□ -0.53
FDPS-201ENST00000356657 FAM74A7A6NL05 159 aa11.73□□□□□ -0.53
FDPS-201ENST00000356657 TMEM78Q5T7P6 136 aa11.73□□□□□ -0.53
FDPS-201ENST00000356657 TEX261Q6UWH6 196 aa11.73□□□□□ -0.53
FDPS-201ENST00000356657 AMTNQ6UX39 209 aa11.73□□□□□ -0.53
FDPS-201ENST00000356657 LENEPQ9Y5L5 61 aa11.73□□□□□ -0.53
FDPS-201ENST00000356657 GGTLC3B5MD39 225 aa11.72□□□□□ -0.53
FDPS-201ENST00000356657 DIRC3C9JPN6 131 aa11.72□□□□□ -0.53
FDPS-201ENST00000356657 IFNA1P01562 189 aa11.72□□□□□ -0.53
FDPS-201ENST00000356657 NMBP08949 121 aa11.72□□□□□ -0.53
FDPS-201ENST00000356657 DEFB1P60022 68 aa11.72□□□□□ -0.53
FDPS-201ENST00000356657 HIST1H2BAQ96A08 127 aa11.72□□□□□ -0.53
FDPS-201ENST00000356657 TMPRSS5Q9H3S3 457 aa11.72□□□□□ -0.53
FDPS-201ENST00000356657 NBEAL2Q6ZNJ1 2754 aa11.72□□□□□ -0.53
FDPS-201ENST00000356657 PRAC2D3DTV9 90 aa11.71□□□□□ -0.53
FDPS-201ENST00000356657 F6UZH7 168 aa11.71□□□□□ -0.53
FDPS-201ENST00000356657 SUMO1P63165 101 aaKnown RBP11.71□□□□□ -0.53
FDPS-201ENST00000356657 ATG101Q9BSB4 218 aa11.71□□□□□ -0.53
FDPS-201ENST00000356657 TCRAP04437 139 aa11.7□□□□□ -0.54
FDPS-201ENST00000356657 CDKN1BP46527 198 aa11.7□□□□□ -0.54
FDPS-201ENST00000356657 CYB561D1Q8N8Q1 229 aa11.7□□□□□ -0.54
FDPS-201ENST00000356657 RNF183Q96D59 192 aa11.7□□□□□ -0.54
FDPS-201ENST00000356657 RCHY1Q96PM5 261 aa11.7□□□□□ -0.54
FDPS-201ENST00000356657 C20orf144Q9BQM9 153 aa11.7□□□□□ -0.54
FDPS-201ENST00000356657 EPDR1Q9UM22 224 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms