RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 RNF182Q8N6D2 247 aa9.82□□□□□ -0.84
PCDHB11-201ENST00000354757 NUPR1O60356 82 aa9.82□□□□□ -0.84
PCDHB11-201ENST00000354757 FCN3O75636 299 aa9.82□□□□□ -0.84
PCDHB11-201ENST00000354757 Q6ZWC4 215 aa9.82□□□□□ -0.84
PCDHB11-201ENST00000354757 RPP21Q9H633 154 aaKnown RBP9.82□□□□□ -0.84
PCDHB11-201ENST00000354757 IGLC7A0M8Q6 106 aa9.81□□□□□ -0.84
PCDHB11-201ENST00000354757 FXYD7P58549 80 aa9.81□□□□□ -0.84
PCDHB11-201ENST00000354757 C1orf229Q6ZS94 237 aaPredicted RBP9.81□□□□□ -0.84
PCDHB11-201ENST00000354757 DTX2Q86UW9 622 aa9.81□□□□□ -0.84
PCDHB11-201ENST00000354757 RAB37Q96AX2 223 aa9.81□□□□□ -0.84
PCDHB11-201ENST00000354757 TMEM249Q2WGJ8 235 aa9.81□□□□□ -0.84
PCDHB11-201ENST00000354757 C10orf105Q8TEF2 133 aa9.81□□□□□ -0.84
PCDHB11-201ENST00000354757 RHPN1-AS1Q9BWJ2 59 aa9.81□□□□□ -0.84
PCDHB11-201ENST00000354757 TCRAP04437 139 aa9.81□□□□□ -0.84
PCDHB11-201ENST00000354757 HBBP68871 147 aa9.81□□□□□ -0.84
PCDHB11-201ENST00000354757 ODF3L1Q8IXM7 274 aa9.81□□□□□ -0.84
PCDHB11-201ENST00000354757 ZNF56Q15929 161 aa9.8□□□□□ -0.84
PCDHB11-201ENST00000354757 PMCHL2Q9BQD1 86 aa9.8□□□□□ -0.84
PCDHB11-201ENST00000354757 TRBV20OR9-2A0A075B6H5 130 aa9.8□□□□□ -0.84
PCDHB11-201ENST00000354757 A0A1B0GUT8 65 aa9.8□□□□□ -0.84
PCDHB11-201ENST00000354757 FMC1Q96HJ9 113 aa9.8□□□□□ -0.84
PCDHB11-201ENST00000354757 IGLV1-47P01700 117 aa9.8□□□□□ -0.84
PCDHB11-201ENST00000354757 DEFB113Q30KQ7 82 aa9.8□□□□□ -0.84
PCDHB11-201ENST00000354757 SLC25A34Q6PIV7 304 aa9.8□□□□□ -0.84
PCDHB11-201ENST00000354757 C18orf15Q96N68 181 aa9.8□□□□□ -0.84
PCDHB11-201ENST00000354757 LEPROTL1O95214 131 aa9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 SAP30O75446 220 aa9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 ZNF324O75467 553 aaPredicted RBP9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 CD7P09564 240 aa9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 BRWD1-AS2P59051 145 aa9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 TMEM136Q6ZRR5 245 aa9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 RRN3P1Q2M238 152 aa9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 STPG4Q8N801 248 aa9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 ZNF114Q8NC26 417 aa9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 NUDT10Q8NFP7 164 aa9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 NUDT11Q96G61 164 aa9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 KCNS1Q96KK3 526 aa9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 MAP1LC3CQ9BXW4 147 aa9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 HCFC1P51610 2035 aa9.79□□□□□ -0.84
PCDHB11-201ENST00000354757 FABP5P3A8MUU1 101 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 RIPPLY3P57055 190 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 FOXL1Q12952 345 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 ERCC8Q13216 396 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 POU2AF1Q16633 256 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 NIT1Q86X76 327 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 ZNF843Q8N446 348 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 WDFY3Q8IZQ1 3526 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 OR4C46A6NHA9 309 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 C3orf79P0CE67 100 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 DEFB136Q30KP8 78 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 FER1L6-AS1Q8NA97 138 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 C20orf144Q9BQM9 153 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 SOX21Q9Y651 276 aaPredicted RBP9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 FAM181BA6NEQ2 426 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 IGLC1P0CG04 106 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 DAZAP2Q15038 168 aaPredicted RBP9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 OR11H6Q8NGC7 330 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 SLC50A1Q9BRV3 221 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 GGTLC3B5MD39 225 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 GATA3P23771 443 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 C12orf54Q6X4T0 127 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 C17orf77Q96MU5 243 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 SPOCK3Q9BQ16 436 aa9.78□□□□□ -0.84
PCDHB11-201ENST00000354757 F2Z2F3 143 aa9.77□□□□□ -0.85
PCDHB11-201ENST00000354757 TSPOP30536 169 aa9.77□□□□□ -0.85
PCDHB11-201ENST00000354757 BCL6BQ8N143 479 aaPredicted RBP9.77□□□□□ -0.85
PCDHB11-201ENST00000354757 FAM110DQ8TAY7 271 aaPredicted RBP9.77□□□□□ -0.85
PCDHB11-201ENST00000354757 LINC01587Q99440 93 aa9.77□□□□□ -0.85
PCDHB11-201ENST00000354757 MRPL36Q9P0J6 103 aaKnown RBP9.77□□□□□ -0.85
PCDHB11-201ENST00000354757 PEF1Q9UBV8 284 aaKnown RBP9.77□□□□□ -0.85
PCDHB11-201ENST00000354757 TRBV7-1A0A0A6YYK4 115 aa9.77□□□□□ -0.85
PCDHB11-201ENST00000354757 UBE2V1Q13404 147 aa9.77□□□□□ -0.85
PCDHB11-201ENST00000354757 IGKV3OR2-268A0A0C4DH90 116 aa9.77□□□□□ -0.85
PCDHB11-201ENST00000354757 TOMM40O96008 361 aa9.77□□□□□ -0.85
PCDHB11-201ENST00000354757 MORN5Q5VZ52 161 aa9.77□□□□□ -0.85
PCDHB11-201ENST00000354757 PEMTQ9UBM1 199 aa9.77□□□□□ -0.85
PCDHB11-201ENST00000354757 IGHV7-81A0A0B4J1V7 117 aa9.76□□□□□ -0.85
PCDHB11-201ENST00000354757 H3BVH4 76 aa9.76□□□□□ -0.85
PCDHB11-201ENST00000354757 CGB3P0DN86 165 aa9.76□□□□□ -0.85
PCDHB11-201ENST00000354757 CGB7P0DN87 165 aa9.76□□□□□ -0.85
PCDHB11-201ENST00000354757 LMO4P61968 165 aa9.76□□□□□ -0.85
PCDHB11-201ENST00000354757 SHANK2-AS3Q9BTD1 123 aa9.76□□□□□ -0.85
PCDHB11-201ENST00000354757 TMEM70Q9BUB7 260 aa9.76□□□□□ -0.85
PCDHB11-201ENST00000354757 HLA-DMBP28068 263 aa9.76□□□□□ -0.85
PCDHB11-201ENST00000354757 ASIPP42127 132 aa9.76□□□□□ -0.85
PCDHB11-201ENST00000354757 AMMECR1LQ6DCA0 310 aa9.76□□□□□ -0.85
PCDHB11-201ENST00000354757 RNASE8Q8TDE3 154 aaKnown RBP9.76□□□□□ -0.85
PCDHB11-201ENST00000354757 NAA38Q9BRA0 125 aaKnown RBP9.76□□□□□ -0.85
PCDHB11-201ENST00000354757 HTN3P15516 51 aa9.75□□□□□ -0.85
PCDHB11-201ENST00000354757 MPV17L2Q567V2 206 aa9.75□□□□□ -0.85
PCDHB11-201ENST00000354757 YPEL4Q96NS1 127 aa9.75□□□□□ -0.85
PCDHB11-201ENST00000354757 CDC42EP3Q9UKI2 254 aa9.75□□□□□ -0.85
PCDHB11-201ENST00000354757 TRBV9A0A0B4J1U6 114 aa9.75□□□□□ -0.85
PCDHB11-201ENST00000354757 A0A1W2PPR1 153 aa9.75□□□□□ -0.85
PCDHB11-201ENST00000354757 COA6Q5JTJ3 125 aaKnown RBP9.75□□□□□ -0.85
PCDHB11-201ENST00000354757 DYNAPQ8N1N2 210 aa9.75□□□□□ -0.85
PCDHB11-201ENST00000354757 MCRIP2Q9BUT9 160 aaKnown RBP9.75□□□□□ -0.85
PCDHB11-201ENST00000354757 IGKV1OR2-108A0A075B7D4 117 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 TRAV12-3A0A0B4J271 114 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 KIR2DL5BA0A0G2JN68 375 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms