RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 RPL39P5Q59GN2 51 aa8.02□□□□□ -1.13
SYNE1-203ENST00000354674 OR9G1Q8NH87 305 aa8.02□□□□□ -1.13
SYNE1-203ENST00000354674 ZNF418Q8TF45 676 aaPredicted RBP8.02□□□□□ -1.13
SYNE1-203ENST00000354674 TIMM9Q9Y5J7 89 aa8.02□□□□□ -1.13
SYNE1-203ENST00000354674 INSIG2Q9Y5U4 225 aa8.02□□□□□ -1.13
SYNE1-203ENST00000354674 IGHV4-61A0A0C4DH41 118 aa8.02□□□□□ -1.13
SYNE1-203ENST00000354674 IZUMO1RA6ND01 250 aa8.02□□□□□ -1.13
SYNE1-203ENST00000354674 CCDC179H3BU77 68 aa8.02□□□□□ -1.13
SYNE1-203ENST00000354674 ENSAO43768 121 aaKnown RBP8.02□□□□□ -1.13
SYNE1-203ENST00000354674 IGLV1-47P01700 117 aa8.02□□□□□ -1.13
SYNE1-203ENST00000354674 PRTN3P24158 256 aa8.02□□□□□ -1.13
SYNE1-203ENST00000354674 GAGE5Q13069 117 aa8.02□□□□□ -1.13
SYNE1-203ENST00000354674 GAGE6Q13070 117 aa8.02□□□□□ -1.13
SYNE1-203ENST00000354674 MOB3BQ86TA1 216 aa8.02□□□□□ -1.13
SYNE1-203ENST00000354674 C1orf159Q96HA4 380 aa8.02□□□□□ -1.13
SYNE1-203ENST00000354674 TNCP24821 2201 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 A0A096LNT2 108 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 APOMO95445 188 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 TAS2R45P59539 299 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 DEFB113Q30KQ7 82 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 MGST2Q99735 147 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 MALRD1Q5VYJ5 2156 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 CSMD2Q7Z408 3487 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 ASH1LQ9NR48 2969 aaKnown RBP8.01□□□□□ -1.13
SYNE1-203ENST00000354674 A8MWL6 223 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 H3BTX0 84 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 LTAP01374 205 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 SLC25A16P16260 332 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 FHL3Q13643 280 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 OR11H6Q8NGC7 330 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 SIRPDQ9H106 197 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 ZNRD1Q9P1U0 126 aa8.01□□□□□ -1.13
SYNE1-203ENST00000354674 PMS2P5A8MQ11 134 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 P0C879 139 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 CACNG7P62955 275 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 HCP5Q6MZN7 132 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 ADTRPQ96IZ2 230 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 PPDPFQ9H3Y8 114 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 ONECUT1Q9UBC0 465 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 IGHV3-48P01763 117 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 KIR2DS2P43631 304 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 TREML4Q6UXN2 200 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 S1PR3Q99500 378 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 SPATA25Q9BR10 227 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 NBPF19A0A087WUL8 3843 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 TRAV5A0A0B4J249 113 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 M0QXV9 152 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 CT45A6P0DMU7 189 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 CT45A5P0DMU8 189 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 CT45A7P0DMV0 189 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 GNG5P63218 68 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 HIST2H2BCQ6DN03 193 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 H2BFWTQ7Z2G1 175 aa8□□□□□ -1.13
SYNE1-203ENST00000354674 ODF3BA8MYP8 253 aa7.99□□□□□ -1.13
SYNE1-203ENST00000354674 GGTLC3B5MD39 225 aa7.99□□□□□ -1.13
SYNE1-203ENST00000354674 LY6LH3BQJ8 138 aa7.99□□□□□ -1.13
SYNE1-203ENST00000354674 J3KRW8 73 aa7.99□□□□□ -1.13
SYNE1-203ENST00000354674 LOXL1Q08397 574 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-203ENST00000354674 ERG28Q9UKR5 140 aa7.99□□□□□ -1.13
SYNE1-203ENST00000354674 PLXNB1O43157 2135 aa7.99□□□□□ -1.13
SYNE1-203ENST00000354674 HELZ2Q9BYK8 2649 aaKnown RBP7.99□□□□□ -1.13
SYNE1-203ENST00000354674 TRAV9-1A0A075B6T8 112 aa7.99□□□□□ -1.13
SYNE1-203ENST00000354674 SMIM27A0A1W2PRY6 76 aa7.99□□□□□ -1.13
SYNE1-203ENST00000354674 APOHP02749 345 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-203ENST00000354674 GGTLC1Q9BX51 225 aa7.99□□□□□ -1.13
SYNE1-203ENST00000354674 C15orf62A8K5M9 175 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 BUB1B-PAK6H3BSN5 160 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 MYOD1P15172 320 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 DLX1P56177 255 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 GAGE13Q4V321 117 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 OR10X1Q8NGY0 326 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-203ENST00000354674 A0A1W2PRD5 423 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 A0A1W2PRF3 423 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 A0A1W2PRM7 423 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 PAX8Q06710 450 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 VMO1Q7Z5L0 202 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 KRTAP1-3Q8IUG1 177 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 OR5AN1Q8NGI8 311 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 APCP25054 2843 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 IGLV2-8P01709 118 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 FGF6P10767 208 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 HOXB4P17483 251 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-203ENST00000354674 SRSF9Q13242 221 aaKnown RBP eCLIP7.98□□□□□ -1.13
SYNE1-203ENST00000354674 MLANAQ16655 118 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 PRELID3AQ96N28 172 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 NABP2Q9BQ15 211 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 YAE1D1Q9NRH1 226 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 OSTCQ9NRP0 149 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 WDR83OSQ9Y284 106 aa7.98□□□□□ -1.13
SYNE1-203ENST00000354674 TEX50A0A1B0GTY4 177 aa7.97□□□□□ -1.13
SYNE1-203ENST00000354674 OR11H12B2RN74 326 aa7.97□□□□□ -1.13
SYNE1-203ENST00000354674 FCGR3BO75015 233 aa7.97□□□□□ -1.13
SYNE1-203ENST00000354674 DIAPH2-AS1Q14236 149 aa7.97□□□□□ -1.13
SYNE1-203ENST00000354674 MRPL23Q16540 153 aaKnown RBP7.97□□□□□ -1.13
SYNE1-203ENST00000354674 OR11H1Q8NG94 326 aa7.97□□□□□ -1.13
SYNE1-203ENST00000354674 OR11H2Q8NH07 326 aa7.97□□□□□ -1.13
SYNE1-203ENST00000354674 PRSS3P2Q8NHM4 247 aa7.97□□□□□ -1.13
SYNE1-203ENST00000354674 MRPL20Q9BYC9 149 aaKnown RBP7.97□□□□□ -1.13
SYNE1-203ENST00000354674 CDIP1Q9H305 208 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms