RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 RNF183Q96D59 192 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 HIGD1BQ9P298 99 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 CGB1A6NKQ9 187 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 SH2D1AO60880 128 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 IL4P05112 153 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 ODF1Q14990 250 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 MSMPQ1L6U9 139 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 ZNF562Q6V9R5 426 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 ZNF502Q8TBZ5 544 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 KLK15Q9H2R5 256 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 PGPEP1Q9NXJ5 209 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 NTN3O00634 580 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-201ENST00000352993 CCL8P80075 99 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 RRN3P1Q2M238 152 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 ANXA2RQ3ZCQ2 193 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 ATP1A1-AS1Q5TC04 95 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 TMEM164Q5U3C3 297 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 MAPKAPK5-AS1Q8N8E1 139 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 RITA1Q96K30 269 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 MRPL35Q9NZE8 188 aaKnown RBP6.04□□□□□ -1.44
BRCA1-201ENST00000352993 MSRB1Q9NZV6 116 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 DMDP11532 3685 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 HOXA3O43365 443 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-201ENST00000352993 CNIH1O95406 144 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 GATA1P15976 413 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-201ENST00000352993 GATA3P23771 443 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 FOXI1Q12951 378 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 SRSF9Q13242 221 aaKnown RBP eCLIP6.04□□□□□ -1.44
BRCA1-201ENST00000352993 PHLDA1Q8WV24 401 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-201ENST00000352993 PTH2Q96A98 100 aa6.04□□□□□ -1.44
BRCA1-201ENST00000352993 IGKV2-40A0A087WW87 121 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-201ENST00000352993 IGKV2D-40P01614 121 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-201ENST00000352993 SCGB1D4Q6XE38 83 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 Q8TAT8 98 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 GAFA1Q96PS6 74 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 WI2-2373I1.2A0A1W2PRP0 233 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 B5MCH6 92 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 C16orf97H3BN30 126 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 GAS8-AS1O95177 125 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 ZNF833PQ6ZTB9 187 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 TMEM75Q8N9X5 138 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 TM2D2Q9BX73 214 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 TRBV19A0A075B6N1 114 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 ZNF785A8K8V0 405 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 HHLA3Q9XRX5 114 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 UFC1Q9Y3C8 167 aa6.03□□□□□ -1.44
BRCA1-201ENST00000352993 DSPP15924 2871 aaKnown RBP6.02□□□□□ -1.45
BRCA1-201ENST00000352993 OR11H12B2RN74 326 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 ATP5LO75964 103 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 TNFRSF6BO95407 300 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 SCGB1C2P0DMR2 95 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 CNTFRP26992 372 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 ZNF493Q6ZR52 646 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 C9orf106Q8NAJ2 232 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 OR11H1Q8NG94 326 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 OR11H2Q8NH07 326 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 PROCRQ9UNN8 238 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 SIT1Q9Y3P8 196 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 ZDBF2Q9HCK1 2354 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 IGFL4Q6B9Z1 124 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 PRSS29PA6NIE9 313 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 LINC01549A6NIU2 74 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 TM4SF5O14894 197 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 ARL3P36405 182 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 PSMG4Q5JS54 123 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 DLX4Q92988 240 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-201ENST00000352993 C1QTNF4Q9BXJ3 329 aa6.02□□□□□ -1.45
BRCA1-201ENST00000352993 EGR2P11161 476 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-201ENST00000352993 XGP55808 180 aa6.01□□□□□ -1.45
BRCA1-201ENST00000352993 DLX1P56177 255 aa6.01□□□□□ -1.45
BRCA1-201ENST00000352993 TEX29Q8N6K0 151 aa6.01□□□□□ -1.45
BRCA1-201ENST00000352993 NXT2Q9NPJ8 142 aaKnown RBP6.01□□□□□ -1.45
BRCA1-201ENST00000352993 LINC00312Q9Y6C7 94 aa6.01□□□□□ -1.45
BRCA1-201ENST00000352993 SIGLEC15Q6ZMC9 328 aa6.01□□□□□ -1.45
BRCA1-201ENST00000352993 Q6ZUT4 128 aa6.01□□□□□ -1.45
BRCA1-201ENST00000352993 NCOR1O75376 2440 aa6.01□□□□□ -1.45
BRCA1-201ENST00000352993 EFNA4P52798 201 aa6.01□□□□□ -1.45
BRCA1-201ENST00000352993 ZFAND6Q6FIF0 208 aa6.01□□□□□ -1.45
BRCA1-201ENST00000352993 CCL17Q92583 94 aa6.01□□□□□ -1.45
BRCA1-201ENST00000352993 FBXL15Q9H469 300 aa6.01□□□□□ -1.45
BRCA1-201ENST00000352993 U3KQK5 164 aa6.01□□□□□ -1.45
BRCA1-201ENST00000352993 IGHV3OR16-8A0A075B7F1 116 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 LHBP01229 141 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 KLRD1Q13241 179 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 PMS2CLQ68D20 193 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 COL27A1Q8IZC6 1860 aaPredicted RBP6□□□□□ -1.45
BRCA1-201ENST00000352993 IGLV2-23P01705 113 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 CRYGCP07315 174 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 CCL11P51671 97 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 TMEM200BQ69YZ2 307 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 MDS2Q8NDY4 140 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 RNF125Q96EQ8 232 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 VKORC1Q9BQB6 163 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 TMEM14CQ9P0S9 112 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 FAM90A27PA6NNH2 459 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 NDUFB3O43676 98 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 IGHV1-46P01743 117 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 PRTN3P24158 256 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 SHANK2-AS3Q9BTD1 123 aa6□□□□□ -1.45
BRCA1-201ENST00000352993 CDIP1Q9H305 208 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms