RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ZNRD1Q9P1U0 126 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 VPREB3Q9UKI3 123 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 HLA-DRB4P13762 266 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 WT1-ASQ06250 92 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 ANKRD29Q8N6D5 301 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 THAP8Q8NA92 274 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 RPEQ96AT9 228 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 MAP1LC3AQ9H492 121 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 OTORQ9NRC9 128 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 HLA-DRB4X5D2U9 266 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 IGHV1OR15-9A0A0B4J2B8 117 aa10.46□□□□□ -0.73
IFT88-202ENST00000351808 SNCGO76070 127 aa10.46□□□□□ -0.73
IFT88-202ENST00000351808 ATP5J2P56134 94 aa10.46□□□□□ -0.73
IFT88-202ENST00000351808 ZCCHC24Q8N2G6 241 aaKnown RBP10.46□□□□□ -0.73
IFT88-202ENST00000351808 KLF14Q8TD94 323 aaPredicted RBP10.46□□□□□ -0.73
IFT88-202ENST00000351808 SSUH2Q9Y2M2 353 aa10.46□□□□□ -0.73
IFT88-202ENST00000351808 AHCTF1Q8WYP5 2266 aa10.46□□□□□ -0.74
IFT88-202ENST00000351808 DSCAML1Q8TD84 2053 aa10.46□□□□□ -0.74
IFT88-202ENST00000351808 IGHV3OR15-7A0A075B7D8 119 aa10.46□□□□□ -0.74
IFT88-202ENST00000351808 A8MWV9 139 aa10.46□□□□□ -0.74
IFT88-202ENST00000351808 IGKV1D-17A0A075B6S4 117 aa10.45□□□□□ -0.74
IFT88-202ENST00000351808 IGHV3-21A0A0B4J1V1 117 aa10.45□□□□□ -0.74
IFT88-202ENST00000351808 M0QXV9 152 aa10.45□□□□□ -0.74
IFT88-202ENST00000351808 NDUFA3O95167 84 aa10.45□□□□□ -0.74
IFT88-202ENST00000351808 MAGEA5P43359 124 aa10.45□□□□□ -0.74
IFT88-202ENST00000351808 TMEM240Q5SV17 173 aa10.45□□□□□ -0.74
IFT88-202ENST00000351808 CXXC4Q9H2H0 198 aa10.45□□□□□ -0.74
IFT88-202ENST00000351808 CENPVL3A0A0U1RRI6 287 aa10.45□□□□□ -0.74
IFT88-202ENST00000351808 MYMXA0A1B0GTQ4 84 aa10.45□□□□□ -0.74
IFT88-202ENST00000351808 NXPH1P58417 271 aa10.45□□□□□ -0.74
IFT88-202ENST00000351808 C3orf56Q8N813 242 aa10.45□□□□□ -0.74
IFT88-202ENST00000351808 C8orf49Q96NF6 230 aa10.45□□□□□ -0.74
IFT88-202ENST00000351808 NCBP2LA6PVI3 153 aaKnown RBP10.44□□□□□ -0.74
IFT88-202ENST00000351808 ATP5LO75964 103 aa10.44□□□□□ -0.74
IFT88-202ENST00000351808 TCL1BO95988 128 aa10.44□□□□□ -0.74
IFT88-202ENST00000351808 MEIG1Q5JSS6 88 aa10.44□□□□□ -0.74
IFT88-202ENST00000351808 SPRY4Q9C004 299 aa10.44□□□□□ -0.74
IFT88-202ENST00000351808 HOXB4P17483 251 aaPredicted RBP10.44□□□□□ -0.74
IFT88-202ENST00000351808 C17orf58Q2M2W7 97 aa10.44□□□□□ -0.74
IFT88-202ENST00000351808 PEAR1Q5VY43 1037 aaPredicted RBP10.44□□□□□ -0.74
IFT88-202ENST00000351808 Q6ZQT7 251 aa10.44□□□□□ -0.74
IFT88-202ENST00000351808 PPP1R27Q86WC6 154 aa10.44□□□□□ -0.74
IFT88-202ENST00000351808 RAB9BQ9NP90 201 aa10.44□□□□□ -0.74
IFT88-202ENST00000351808 TRAV8-2A0A0B4J237 113 aa10.44□□□□□ -0.74
IFT88-202ENST00000351808 C17orf77Q96MU5 243 aa10.43□□□□□ -0.74
IFT88-202ENST00000351808 ZNF71Q9NQZ8 489 aaPredicted RBP10.43□□□□□ -0.74
IFT88-202ENST00000351808 UBE2D3P61077 147 aa10.43□□□□□ -0.74
IFT88-202ENST00000351808 UBE2D2P62837 147 aa10.43□□□□□ -0.74
IFT88-202ENST00000351808 PROCRQ9UNN8 238 aa10.43□□□□□ -0.74
IFT88-202ENST00000351808 IGHV5-10-1A0A0J9YXX1 117 aa10.42□□□□□ -0.74
IFT88-202ENST00000351808 CGB1A6NKQ9 187 aa10.42□□□□□ -0.74
IFT88-202ENST00000351808 GATA1P15976 413 aaPredicted RBP10.42□□□□□ -0.74
IFT88-202ENST00000351808 FCN3O75636 299 aa10.42□□□□□ -0.74
IFT88-202ENST00000351808 MSRB1Q9NZV6 116 aa10.42□□□□□ -0.74
IFT88-202ENST00000351808 TIMM8AO60220 97 aaPredicted RBP10.41□□□□□ -0.74
IFT88-202ENST00000351808 SPINK14Q6IE38 97 aa10.41□□□□□ -0.74
IFT88-202ENST00000351808 HCP5Q6MZN7 132 aa10.41□□□□□ -0.74
IFT88-202ENST00000351808 PIP4P1Q86T03 277 aa10.41□□□□□ -0.74
IFT88-202ENST00000351808 RASL11BQ9BPW5 248 aa10.41□□□□□ -0.74
IFT88-202ENST00000351808 ZGRF1Q86YA3 2104 aa10.41□□□□□ -0.74
IFT88-202ENST00000351808 CGB3P0DN86 165 aa10.41□□□□□ -0.74
IFT88-202ENST00000351808 CGB7P0DN87 165 aa10.41□□□□□ -0.74
IFT88-202ENST00000351808 SUB1P53999 127 aaKnown RBP eCLIP10.41□□□□□ -0.74
IFT88-202ENST00000351808 SBSPONQ8IVN8 264 aa10.41□□□□□ -0.74
IFT88-202ENST00000351808 TRGV9Q99603 122 aa10.41□□□□□ -0.74
IFT88-202ENST00000351808 TNFRSF6BO95407 300 aa10.4□□□□□ -0.74
IFT88-202ENST00000351808 LYZP61626 148 aa10.4□□□□□ -0.74
IFT88-202ENST00000351808 GUSBP11Q6P575 273 aa10.4□□□□□ -0.74
IFT88-202ENST00000351808 TMEM75Q8N9X5 138 aa10.4□□□□□ -0.74
IFT88-202ENST00000351808 RAB1BQ9H0U4 201 aa10.4□□□□□ -0.74
IFT88-202ENST00000351808 ICE1Q9Y2F5 2266 aa10.4□□□□□ -0.74
IFT88-202ENST00000351808 TRBV6-1A0A0K0K1D8 114 aa10.4□□□□□ -0.74
IFT88-202ENST00000351808 LGALS1P09382 135 aaKnown RBP10.4□□□□□ -0.74
IFT88-202ENST00000351808 RNF185Q96GF1 192 aa10.4□□□□□ -0.74
IFT88-202ENST00000351808 HIGD1AQ9Y241 93 aa10.4□□□□□ -0.74
IFT88-202ENST00000351808 M0R3E3 92 aa10.4□□□□□ -0.75
IFT88-202ENST00000351808 SLC25A39Q9BZJ4 359 aaPredicted RBP10.4□□□□□ -0.75
IFT88-202ENST00000351808 NXT2Q9NPJ8 142 aaKnown RBP10.4□□□□□ -0.75
IFT88-202ENST00000351808 RPUSD1Q9UJJ7 312 aaKnown RBP10.4□□□□□ -0.75
IFT88-202ENST00000351808 LINC01619G3V211 115 aa10.39□□□□□ -0.75
IFT88-202ENST00000351808 APELAP0DMC3 54 aa10.39□□□□□ -0.75
IFT88-202ENST00000351808 UBE2D1P51668 147 aa10.39□□□□□ -0.75
IFT88-202ENST00000351808 SH2D1AO60880 128 aa10.39□□□□□ -0.75
IFT88-202ENST00000351808 PF4V1P10720 104 aa10.39□□□□□ -0.75
IFT88-202ENST00000351808 Q0VFX4 171 aa10.39□□□□□ -0.75
IFT88-202ENST00000351808 SRSF9Q13242 221 aaKnown RBP eCLIP10.39□□□□□ -0.75
IFT88-202ENST00000351808 IGF2-ASQ6U949 168 aa10.39□□□□□ -0.75
IFT88-202ENST00000351808 MYOZ3Q8TDC0 251 aa10.39□□□□□ -0.75
IFT88-202ENST00000351808 CTSZQ9UBR2 303 aa10.39□□□□□ -0.75
IFT88-202ENST00000351808 DSCAMO60469 2012 aa10.38□□□□□ -0.75
IFT88-202ENST00000351808 LINC01546A6NGU7 62 aa10.38□□□□□ -0.75
IFT88-202ENST00000351808 ASIPP42127 132 aa10.38□□□□□ -0.75
IFT88-202ENST00000351808 TMEM78Q5T7P6 136 aa10.38□□□□□ -0.75
IFT88-202ENST00000351808 OR11H6Q8NGC7 330 aa10.38□□□□□ -0.75
IFT88-202ENST00000351808 RASL10AQ92737 203 aa10.38□□□□□ -0.75
IFT88-202ENST00000351808 AAMDCQ9H7C9 122 aa10.38□□□□□ -0.75
IFT88-202ENST00000351808 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.38□□□□□ -0.75
IFT88-202ENST00000351808 SCGB1C2P0DMR2 95 aa10.38□□□□□ -0.75
IFT88-202ENST00000351808 FAM201AQ5SY85 155 aa10.38□□□□□ -0.75
IFT88-202ENST00000351808 LYRM7Q5U5X0 104 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms