RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 CCL1P22362 96 aa9.02□□□□□ -0.97
SMARCE1-202ENST00000348513 C10orf55Q5SWW7 151 aa9.02□□□□□ -0.97
SMARCE1-202ENST00000348513 PLEKHB2Q96CS7 222 aa9.02□□□□□ -0.97
SMARCE1-202ENST00000348513 GFRA4Q9GZZ7 299 aa9.02□□□□□ -0.97
SMARCE1-202ENST00000348513 SOCS3O14543 225 aa9.02□□□□□ -0.97
SMARCE1-202ENST00000348513 CRYGSP22914 178 aa9.02□□□□□ -0.97
SMARCE1-202ENST00000348513 OTORQ9NRC9 128 aa9.02□□□□□ -0.97
SMARCE1-202ENST00000348513 FAM240AA0A1B0GVK7 77 aa9.02□□□□□ -0.97
SMARCE1-202ENST00000348513 PRO1854Q9UHT4 67 aa9.02□□□□□ -0.97
SMARCE1-202ENST00000348513 FAM166AQ6J272 317 aa9.01□□□□□ -0.97
SMARCE1-202ENST00000348513 CNOT1A5YKK6 2376 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-202ENST00000348513 IGKV1-27A0A075B6S5 117 aa9.01□□□□□ -0.97
SMARCE1-202ENST00000348513 SMIM27A0A1W2PRY6 76 aa9.01□□□□□ -0.97
SMARCE1-202ENST00000348513 EFNB3Q15768 340 aa9.01□□□□□ -0.97
SMARCE1-202ENST00000348513 TMEM200BQ69YZ2 307 aa9.01□□□□□ -0.97
SMARCE1-202ENST00000348513 C8orf31Q8N9H6 132 aa9.01□□□□□ -0.97
SMARCE1-202ENST00000348513 RNF166Q96A37 237 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-202ENST00000348513 SLC25A39Q9BZJ4 359 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-202ENST00000348513 A0A0B4J2C4 111 aa9.01□□□□□ -0.97
SMARCE1-202ENST00000348513 DTX2Q86UW9 622 aa9.01□□□□□ -0.97
SMARCE1-202ENST00000348513 TMEM167AQ8TBQ9 72 aa9.01□□□□□ -0.97
SMARCE1-202ENST00000348513 LINC00271P0C7V0 271 aa9□□□□□ -0.97
SMARCE1-202ENST00000348513 CNTFRP26992 372 aa9□□□□□ -0.97
SMARCE1-202ENST00000348513 DUTP33316 252 aaKnown RBP9□□□□□ -0.97
SMARCE1-202ENST00000348513 VWC2Q2TAL6 325 aa9□□□□□ -0.97
SMARCE1-202ENST00000348513 C8orf46Q8TAG6 207 aa9□□□□□ -0.97
SMARCE1-202ENST00000348513 CFHR2P36980 270 aa9□□□□□ -0.97
SMARCE1-202ENST00000348513 NDUFC2-KCTD14E9PQ53 114 aa9□□□□□ -0.97
SMARCE1-202ENST00000348513 GHRHP01286 108 aa9□□□□□ -0.97
SMARCE1-202ENST00000348513 ZNF474Q6S9Z5 364 aaPredicted RBP9□□□□□ -0.97
SMARCE1-202ENST00000348513 MED12Q93074 2177 aa9□□□□□ -0.97
SMARCE1-202ENST00000348513 PRR30Q53SZ7 412 aaPredicted RBP9□□□□□ -0.97
SMARCE1-202ENST00000348513 C17orf82Q86X59 251 aaPredicted RBP9□□□□□ -0.97
SMARCE1-202ENST00000348513 CD177Q8N6Q3 437 aa9□□□□□ -0.97
SMARCE1-202ENST00000348513 SBF1O95248 1867 aa8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 V9GYV3 84 aa8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 PSPNO60542 156 aa8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 DAD1P61803 113 aa8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 RNF144BQ7Z419 303 aa8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 DEFB104AQ8WTQ1 72 aa8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 LIME1Q9H400 295 aa8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 EFNA4P52798 201 aa8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 HRCT1Q6UXD1 115 aa8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 RNASE2P10153 161 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 PAX1P15863 534 aa8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 NEGR1Q7Z3B1 354 aa8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 MDS2Q8NDY4 140 aa8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 TMEM158Q8WZ71 300 aa8.99□□□□□ -0.97
SMARCE1-202ENST00000348513 MYOD1P15172 320 aa8.98□□□□□ -0.97
SMARCE1-202ENST00000348513 TMEM178BH3BS89 294 aa8.98□□□□□ -0.97
SMARCE1-202ENST00000348513 NRGNQ92686 78 aa8.98□□□□□ -0.97
SMARCE1-202ENST00000348513 WDR83OSQ9Y284 106 aa8.98□□□□□ -0.97
SMARCE1-202ENST00000348513 INTS1Q8N201 2190 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-202ENST00000348513 TRAV41A0A0B4J266 112 aa8.98□□□□□ -0.97
SMARCE1-202ENST00000348513 AKAP6Q13023 2319 aa8.98□□□□□ -0.97
SMARCE1-202ENST00000348513 FAM236DA0A1B0GTK5 79 aa8.98□□□□□ -0.97
SMARCE1-202ENST00000348513 IGHV1-8P0DP01 117 aa8.98□□□□□ -0.97
SMARCE1-202ENST00000348513 FAM236CP0DP71 79 aa8.98□□□□□ -0.97
SMARCE1-202ENST00000348513 PAX8Q06710 450 aa8.98□□□□□ -0.97
SMARCE1-202ENST00000348513 PRCDQ00LT1 54 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 ZNF581Q9P0T4 197 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 KIF26BQ2KJY2 2108 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 POLEQ07864 2286 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 CXCL5P42830 114 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 GATD1Q8NB37 220 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 LINC00479Q96M42 142 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 LINC00205P59089 165 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 PVRIGQ6DKI7 326 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 PHLDA1Q8WV24 401 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 SRRM5B3KS81 715 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 COL8A2P25067 703 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 MAPK1IP1LQ8NDC0 245 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 TRAV3A0A0B4J244 114 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 SPATA31B1PQ5VZV4 182 aa8.97□□□□□ -0.97
SMARCE1-202ENST00000348513 H3BUX3 64 aa8.96□□□□□ -0.97
SMARCE1-202ENST00000348513 C15orf32Q32M92 178 aa8.96□□□□□ -0.97
SMARCE1-202ENST00000348513 MORN5Q5VZ52 161 aa8.96□□□□□ -0.97
SMARCE1-202ENST00000348513 WFDC11Q8NEX6 87 aa8.96□□□□□ -0.97
SMARCE1-202ENST00000348513 IGHV1-3A0A0C4DH29 117 aa8.96□□□□□ -0.97
SMARCE1-202ENST00000348513 NDPQ00604 133 aa8.96□□□□□ -0.97
SMARCE1-202ENST00000348513 SPATA12Q7Z6I5 190 aa8.96□□□□□ -0.97
SMARCE1-202ENST00000348513 HIGD1BQ9P298 99 aa8.96□□□□□ -0.97
SMARCE1-202ENST00000348513 NCOR1O75376 2440 aa8.96□□□□□ -0.98
SMARCE1-202ENST00000348513 LYPD2Q6UXB3 125 aa8.96□□□□□ -0.98
SMARCE1-202ENST00000348513 UBL5Q9BZL1 73 aa8.96□□□□□ -0.98
SMARCE1-202ENST00000348513 IGKV2-40A0A087WW87 121 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-202ENST00000348513 IGKV2D-40P01614 121 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-202ENST00000348513 SIGLEC15Q6ZMC9 328 aa8.96□□□□□ -0.98
SMARCE1-202ENST00000348513 RPUSD1Q9UJJ7 312 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-202ENST00000348513 FREM3P0C091 2139 aa8.96□□□□□ -0.98
SMARCE1-202ENST00000348513 PAX9P55771 341 aa8.95□□□□□ -0.98
SMARCE1-202ENST00000348513 ZNF726P1Q15940 193 aa8.95□□□□□ -0.98
SMARCE1-202ENST00000348513 THSD7BQ9C0I4 1608 aa8.95□□□□□ -0.98
SMARCE1-202ENST00000348513 IGHV3-64A0A075B6Q5 118 aa8.95□□□□□ -0.98
SMARCE1-202ENST00000348513 ZNF329Q86UD4 541 aa8.95□□□□□ -0.98
SMARCE1-202ENST00000348513 IGHV3-73A0A0B4J1V6 119 aa8.95□□□□□ -0.98
SMARCE1-202ENST00000348513 TRGV4A0A0C4DH28 118 aa8.95□□□□□ -0.98
SMARCE1-202ENST00000348513 B3GALT5-AS1P59052 145 aa8.95□□□□□ -0.98
SMARCE1-202ENST00000348513 SLC50A1Q9BRV3 221 aa8.95□□□□□ -0.98
SMARCE1-202ENST00000348513 FER1L5A0AVI2 2057 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms